RNA–Protein interactions for RNA: ENST00000466532.1

COL9A3-206, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 2

Gene COL9A3, Length 539 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-206ENST00000466532 CFAP61Q8NHU2 1237 aa18.44■□□□□ 0.54
COL9A3-206ENST00000466532 ASZ1Q8WWH4 475 aa18.44■□□□□ 0.54
COL9A3-206ENST00000466532 PEX13Q92968 403 aa18.44■□□□□ 0.54
COL9A3-206ENST00000466532 PNPLA2Q96AD5 504 aa18.44■□□□□ 0.54
COL9A3-206ENST00000466532 FER1L6-AS2Q96M78 137 aa18.44■□□□□ 0.54
COL9A3-206ENST00000466532 NDC1Q9BTX1 674 aa18.44■□□□□ 0.54
COL9A3-206ENST00000466532 LRRC4CQ9HCJ2 640 aa18.44■□□□□ 0.54
COL9A3-206ENST00000466532 CATSPERZQ9NTU4 200 aa18.44■□□□□ 0.54
COL9A3-206ENST00000466532 PAK5Q9P286 719 aa18.44■□□□□ 0.54
COL9A3-206ENST00000466532 CIDEBQ9UHD4 219 aa18.44■□□□□ 0.54
COL9A3-206ENST00000466532 ANAPC5Q9UJX4 755 aa18.44■□□□□ 0.54
COL9A3-206ENST00000466532 KLHL20Q9Y2M5 609 aa18.44■□□□□ 0.54
COL9A3-206ENST00000466532 PEX12O00623 359 aa18.43■□□□□ 0.54
COL9A3-206ENST00000466532 GPC4O75487 556 aa18.43■□□□□ 0.54
COL9A3-206ENST00000466532 AGFG2O95081 481 aa18.43■□□□□ 0.54
COL9A3-206ENST00000466532 RPN2P04844 631 aa18.43■□□□□ 0.54
COL9A3-206ENST00000466532 APOA4P06727 396 aa18.43■□□□□ 0.54
COL9A3-206ENST00000466532 NKAIN1Q4KMZ8 207 aa18.43■□□□□ 0.54
COL9A3-206ENST00000466532 AARS2Q5JTZ9 985 aaKnown RBP18.43■□□□□ 0.54
COL9A3-206ENST00000466532 VWA5B1Q5TIE3 1220 aa18.43■□□□□ 0.54
COL9A3-206ENST00000466532 UNC5DQ6UXZ4 953 aa18.43■□□□□ 0.54
COL9A3-206ENST00000466532 TAX1BP1Q86VP1 789 aa18.43■□□□□ 0.54
COL9A3-206ENST00000466532 GAS2L3Q86XJ1 694 aa18.43■□□□□ 0.54
COL9A3-206ENST00000466532 DCUN1D3Q8IWE4 304 aa18.43■□□□□ 0.54
COL9A3-206ENST00000466532 C2orf73Q8N5S3 287 aaPredicted RBP18.43■□□□□ 0.54
COL9A3-206ENST00000466532 LMNTD1Q8N9Z9 388 aa18.43■□□□□ 0.54
COL9A3-206ENST00000466532 LINC01555Q8NAE3 123 aa18.43■□□□□ 0.54
COL9A3-206ENST00000466532 OR2Y1Q8NGV0 311 aa18.43■□□□□ 0.54
COL9A3-206ENST00000466532 MENTQ9BUN1 341 aa18.43■□□□□ 0.54
COL9A3-206ENST00000466532 EURLQ9NYK6 297 aa18.43■□□□□ 0.54
COL9A3-206ENST00000466532 C5AR2Q9P296 337 aa18.43■□□□□ 0.54
COL9A3-206ENST00000466532 MAP10Q9P2G4 905 aa18.43■□□□□ 0.54
COL9A3-206ENST00000466532 GUCA1BQ9UMX6 200 aa18.43■□□□□ 0.54
COL9A3-206ENST00000466532 MDC1Q14676 2089 aaKnown RBP18.43■□□□□ 0.54
COL9A3-206ENST00000466532 SPTAN1Q13813 2472 aaKnown RBP18.42■□□□□ 0.54
COL9A3-206ENST00000466532 CNOT3O75175 753 aaKnown RBP18.42■□□□□ 0.54
COL9A3-206ENST00000466532 IGHEP01854 428 aa18.42■□□□□ 0.54
COL9A3-206ENST00000466532 CD9P21926 228 aa18.42■□□□□ 0.54
COL9A3-206ENST00000466532 FOXL2P58012 376 aa18.42■□□□□ 0.54
COL9A3-206ENST00000466532 GRB7Q14451 532 aa18.42■□□□□ 0.54
COL9A3-206ENST00000466532 TMED2Q15363 201 aa18.42■□□□□ 0.54
COL9A3-206ENST00000466532 DCAF10Q5QP82 559 aa18.42■□□□□ 0.54
COL9A3-206ENST00000466532 MRPL14Q6P1L8 145 aaKnown RBP18.42■□□□□ 0.54
COL9A3-206ENST00000466532 CLEC1AQ8NC01 280 aa18.42■□□□□ 0.54
COL9A3-206ENST00000466532 DLG3Q92796 817 aa18.42■□□□□ 0.54
COL9A3-206ENST00000466532 SLC22A18Q96BI1 424 aa18.42■□□□□ 0.54
COL9A3-206ENST00000466532 IL17FQ96PD4 163 aa18.42■□□□□ 0.54
COL9A3-206ENST00000466532 TSGA10Q9BZW7 698 aa18.42■□□□□ 0.54
COL9A3-206ENST00000466532 CHRAC1Q9NRG0 131 aa18.42■□□□□ 0.54
COL9A3-206ENST00000466532 P4HTMQ9NXG6 502 aa18.42■□□□□ 0.54
COL9A3-206ENST00000466532 CAMSAP3Q9P1Y5 1249 aaPredicted RBP18.42■□□□□ 0.54
COL9A3-206ENST00000466532 SPTBN1Q01082 2364 aaKnown RBP18.42■□□□□ 0.54
COL9A3-206ENST00000466532 NBPF19A0A087WUL8 3843 aa18.41■□□□□ 0.54
COL9A3-206ENST00000466532 PRMT5O14744 637 aaPredicted RBP18.41■□□□□ 0.54
COL9A3-206ENST00000466532 CD3EAPO15446 510 aaKnown RBP18.41■□□□□ 0.54
COL9A3-206ENST00000466532 S1PR4O95977 384 aa18.41■□□□□ 0.54
COL9A3-206ENST00000466532 ZSCAN5DPP0CG00 497 aa18.41■□□□□ 0.54
COL9A3-206ENST00000466532 ALAS2P22557 587 aa18.41■□□□□ 0.54
COL9A3-206ENST00000466532 AOAHP28039 575 aa18.41■□□□□ 0.54
COL9A3-206ENST00000466532 CDC25BP30305 580 aa18.41■□□□□ 0.54
COL9A3-206ENST00000466532 TTPAP49638 278 aa18.41■□□□□ 0.54
COL9A3-206ENST00000466532 PCID2Q5JVF3 399 aa18.41■□□□□ 0.54
COL9A3-206ENST00000466532 PTRHD1Q6GMV3 140 aaKnown RBP18.41■□□□□ 0.54
COL9A3-206ENST00000466532 GALNT16Q8N428 558 aa18.41■□□□□ 0.54
COL9A3-206ENST00000466532 OR2L8Q8NGY9 312 aa18.41■□□□□ 0.54
COL9A3-206ENST00000466532 PTERQ96BW5 349 aa18.41■□□□□ 0.54
COL9A3-206ENST00000466532 SLC29A3Q9BZD2 475 aa18.41■□□□□ 0.54
COL9A3-206ENST00000466532 INTS7Q9NVH2 962 aaKnown RBP18.41■□□□□ 0.54
COL9A3-206ENST00000466532 MARCH4Q9P2E8 410 aaPredicted RBP18.41■□□□□ 0.54
COL9A3-206ENST00000466532 SLC39A10Q9ULF5 831 aa18.41■□□□□ 0.54
COL9A3-206ENST00000466532 HEATR5BQ9P2D3 2071 aa18.4■□□□□ 0.54
COL9A3-206ENST00000466532 TCP11X1B4DZS4 312 aa18.4■□□□□ 0.54
COL9A3-206ENST00000466532 RASGRF2O14827 1237 aa18.4■□□□□ 0.54
COL9A3-206ENST00000466532 KRT86O43790 486 aa18.4■□□□□ 0.54
COL9A3-206ENST00000466532 SLCO2B1O94956 709 aa18.4■□□□□ 0.54
COL9A3-206ENST00000466532 UMODP07911 640 aa18.4■□□□□ 0.54
COL9A3-206ENST00000466532 VARSP26640 1264 aaKnown RBP18.4■□□□□ 0.54
COL9A3-206ENST00000466532 RPL22P35268 128 aaKnown RBP18.4■□□□□ 0.54
COL9A3-206ENST00000466532 ARSFP54793 590 aa18.4■□□□□ 0.54
COL9A3-206ENST00000466532 SESN2P58004 480 aaPredicted RBP18.4■□□□□ 0.54
COL9A3-206ENST00000466532 MYBPC3Q14896 1274 aa18.4■□□□□ 0.54
COL9A3-206ENST00000466532 CYP2A13Q16696 494 aa18.4■□□□□ 0.54
COL9A3-206ENST00000466532 TTLL10Q6ZVT0 673 aa18.4■□□□□ 0.54
COL9A3-206ENST00000466532 PPP1R32Q7Z5V6 425 aa18.4■□□□□ 0.54
COL9A3-206ENST00000466532 MCATQ8IVS2 390 aaKnown RBP18.4■□□□□ 0.54
COL9A3-206ENST00000466532 TMEM151BQ8IW70 566 aa18.4■□□□□ 0.54
COL9A3-206ENST00000466532 GSDMBQ8TAX9 411 aa18.4■□□□□ 0.54
COL9A3-206ENST00000466532 UBE2Q2Q8WVN8 375 aa18.4■□□□□ 0.54
COL9A3-206ENST00000466532 PANX3Q96QZ0 392 aa18.4■□□□□ 0.54
COL9A3-206ENST00000466532 SLC22A11Q9NSA0 550 aa18.4■□□□□ 0.54
COL9A3-206ENST00000466532 GNPTGQ9UJJ9 305 aa18.4■□□□□ 0.54
COL9A3-206ENST00000466532 HIVEP3Q5T1R4 2406 aa18.4■□□□□ 0.54
COL9A3-206ENST00000466532 MASP2O00187 686 aa18.39■□□□□ 0.53
COL9A3-206ENST00000466532 KLHL41O60662 606 aa18.39■□□□□ 0.53
COL9A3-206ENST00000466532 ALPPP05187 535 aa18.39■□□□□ 0.53
COL9A3-206ENST00000466532 GRIA3P42263 894 aa18.39■□□□□ 0.53
COL9A3-206ENST00000466532 GCGRP47871 477 aa18.39■□□□□ 0.53
COL9A3-206ENST00000466532 CRADDP78560 199 aa18.39■□□□□ 0.53
COL9A3-206ENST00000466532 RPS6KA1Q15418 735 aa18.39■□□□□ 0.53
COL9A3-206ENST00000466532 SF1Q15637 639 aaKnown RBP18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms