RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 LRIG3Q6UXM1 1119 aa9.43□□□□□ -0.9
RTFDC1-205ENST00000466260 DCUN1D3Q8IWE4 304 aa9.43□□□□□ -0.9
RTFDC1-205ENST00000466260 ADGRF3Q8IZF5 1079 aa9.43□□□□□ -0.9
RTFDC1-205ENST00000466260 FBXO36Q8NEA4 188 aa9.43□□□□□ -0.9
RTFDC1-205ENST00000466260 ZFPM2Q8WW38 1151 aa9.43□□□□□ -0.9
RTFDC1-205ENST00000466260 KLHL6Q8WZ60 621 aa9.43□□□□□ -0.9
RTFDC1-205ENST00000466260 CERS2Q96G23 380 aa9.43□□□□□ -0.9
RTFDC1-205ENST00000466260 FOPNLQ96NB1 174 aa9.43□□□□□ -0.9
RTFDC1-205ENST00000466260 TEFMQ96QE5 360 aaKnown RBP9.43□□□□□ -0.9
RTFDC1-205ENST00000466260 CCNL2Q96S94 520 aaPredicted RBP9.43□□□□□ -0.9
RTFDC1-205ENST00000466260 TCF12Q99081 682 aa9.43□□□□□ -0.9
RTFDC1-205ENST00000466260 CD180Q99467 661 aa9.43□□□□□ -0.9
RTFDC1-205ENST00000466260 GPR21Q99679 349 aa9.43□□□□□ -0.9
RTFDC1-205ENST00000466260 WDR83Q9BRX9 315 aaKnown RBP9.43□□□□□ -0.9
RTFDC1-205ENST00000466260 ASPSCR1Q9BZE9 553 aa9.43□□□□□ -0.9
RTFDC1-205ENST00000466260 TFB2MQ9H5Q4 396 aaKnown RBP9.43□□□□□ -0.9
RTFDC1-205ENST00000466260 FBXO8Q9NRD0 319 aa9.43□□□□□ -0.9
RTFDC1-205ENST00000466260 FAM114A2Q9NRY5 505 aa9.43□□□□□ -0.9
RTFDC1-205ENST00000466260 SPHK1Q9NYA1 384 aa9.43□□□□□ -0.9
RTFDC1-205ENST00000466260 ZC3H7BQ9UGR2 993 aaKnown RBP9.43□□□□□ -0.9
RTFDC1-205ENST00000466260 POLG2Q9UHN1 485 aa9.43□□□□□ -0.9
RTFDC1-205ENST00000466260 RARRES3Q9UL19 164 aa9.43□□□□□ -0.9
RTFDC1-205ENST00000466260 PCDHGA3Q9Y5H0 932 aa9.43□□□□□ -0.9
RTFDC1-205ENST00000466260 DMXL2Q8TDJ6 3036 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 H3BMM5 538 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 MATN2O00339 956 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 KDM1AO60341 852 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 VPS26AO75436 327 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 SPAG6O75602 509 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 ZBTB11O95625 1053 aaPredicted RBP9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 TTC4O95801 387 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 SYF2O95926 243 aaKnown RBP9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 NTRK1P04629 796 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 RPN2P04844 631 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 CHRM5P08912 532 aaPredicted RBP9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 WT1P19544 449 aaPredicted RBP9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 PEBP1P30086 187 aaKnown RBP9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 PKLRP30613 574 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 PGGT1BP53609 377 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 SLC7A5Q01650 507 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 ACY1Q03154 408 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 VAC14Q08AM6 782 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 RBM20Q5T481 1227 aaKnown RBP9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 PRAMEF17Q5VTA0 474 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 ZNF549Q6P9A3 640 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 TTC23LQ6PF05 361 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 SPESP1Q6UW49 350 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 UNC5DQ6UXZ4 953 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 TIPARPQ7Z3E1 657 aaKnown RBP9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 GPR155Q7Z3F1 870 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 CCDC25Q86WR0 208 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 PPP1R3BQ86XI6 285 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 TMEM126BQ8IUX1 230 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 CPNE9Q8IYJ1 553 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 ZBED8Q8IZ13 594 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 NLGN4XQ8N0W4 816 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 GPATCH11Q8N954 259 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 GALNT6Q8NCL4 622 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 NLGN4YQ8NFZ3 816 aaPredicted RBP9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 GIMAP7Q8NHV1 300 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 GABPB2Q8TAK5 448 aaPredicted RBP9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 NKD1Q969G9 470 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 SLC41A2Q96JW4 573 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 ERP44Q9BS26 406 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 PRORYQ9H606 182 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 PDE7BQ9NP56 450 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 SAYSD1Q9NPB0 183 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 LATS2Q9NRM7 1088 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 C1GALT1Q9NS00 363 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 FGF21Q9NSA1 209 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 IRAK4Q9NWZ3 460 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 CAMSAP3Q9P1Y5 1249 aaPredicted RBP9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 ACSL6Q9UKU0 697 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 KLHL20Q9Y2M5 609 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 UTP11Q9Y3A2 253 aaKnown RBP9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 TEX264Q9Y6I9 313 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 CCDC88CQ9P219 2028 aa9.42□□□□□ -0.9
RTFDC1-205ENST00000466260 LOC101059948A0A1B0GTJ6 334 aa9.41□□□□□ -0.9
RTFDC1-205ENST00000466260 ESYT3A0FGR9 886 aa9.41□□□□□ -0.9
RTFDC1-205ENST00000466260 HMGB1P1B2RPK0 211 aaPredicted RBP9.41□□□□□ -0.9
RTFDC1-205ENST00000466260 TMEM150CB9EJG8 249 aa9.41□□□□□ -0.9
RTFDC1-205ENST00000466260 NDC80O14777 642 aa9.41□□□□□ -0.9
RTFDC1-205ENST00000466260 PIAS1O75925 651 aa9.41□□□□□ -0.9
RTFDC1-205ENST00000466260 SLCO2B1O94956 709 aa9.41□□□□□ -0.9
RTFDC1-205ENST00000466260 C1orf105O95561 183 aa9.41□□□□□ -0.9
RTFDC1-205ENST00000466260 LIFP15018 202 aa9.41□□□□□ -0.9
RTFDC1-205ENST00000466260 SAT1P21673 171 aa9.41□□□□□ -0.9
RTFDC1-205ENST00000466260 PSMB5P28074 263 aa9.41□□□□□ -0.9
RTFDC1-205ENST00000466260 RAB28P51157 221 aa9.41□□□□□ -0.9
RTFDC1-205ENST00000466260 PLTPP55058 493 aa9.41□□□□□ -0.9
RTFDC1-205ENST00000466260 UCNP55089 124 aa9.41□□□□□ -0.9
RTFDC1-205ENST00000466260 CYP4F2P78329 520 aa9.41□□□□□ -0.9
RTFDC1-205ENST00000466260 HSD11B2P80365 405 aa9.41□□□□□ -0.9
RTFDC1-205ENST00000466260 ZSCAN26Q16670 478 aa9.41□□□□□ -0.9
RTFDC1-205ENST00000466260 TTLL9Q3SXZ7 439 aa9.41□□□□□ -0.9
RTFDC1-205ENST00000466260 TMTC4Q5T4D3 741 aa9.41□□□□□ -0.9
RTFDC1-205ENST00000466260 ARMC3Q5W041 872 aa9.41□□□□□ -0.9
RTFDC1-205ENST00000466260 PWWP2BQ6NUJ5 590 aa9.41□□□□□ -0.9
RTFDC1-205ENST00000466260 THSD4Q6ZMP0 1018 aa9.41□□□□□ -0.9
RTFDC1-205ENST00000466260 CEP128Q6ZU80 1094 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms