RNA–Protein interactions for RNA: ENST00000466100.1

VCP-204, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 508 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-204ENST00000466100 ATP5F1P24539 256 aaPredicted RBP10.8□□□□□ -0.68
VCP-204ENST00000466100 PEBP1P30086 187 aaKnown RBP10.8□□□□□ -0.68
VCP-204ENST00000466100 HPDP32754 393 aaPredicted RBP10.8□□□□□ -0.68
VCP-204ENST00000466100 AGTR2P50052 363 aa10.8□□□□□ -0.68
VCP-204ENST00000466100 LIMK1P53667 647 aa10.8□□□□□ -0.68
VCP-204ENST00000466100 PNLIPRP1P54315 467 aa10.8□□□□□ -0.68
VCP-204ENST00000466100 ALDH18A1P54886 795 aaKnown RBP10.8□□□□□ -0.68
VCP-204ENST00000466100 PPP2R2AP63151 447 aa10.8□□□□□ -0.68
VCP-204ENST00000466100 TAP2Q03519 686 aa10.8□□□□□ -0.68
VCP-204ENST00000466100 KRT33BQ14525 404 aa10.8□□□□□ -0.68
VCP-204ENST00000466100 SETDB1Q15047 1291 aa10.8□□□□□ -0.68
VCP-204ENST00000466100 C18orf21Q32NC0 220 aaPredicted RBP10.8□□□□□ -0.68
VCP-204ENST00000466100 HSP90B2PQ58FF3 399 aa10.8□□□□□ -0.68
VCP-204ENST00000466100 STPG1Q5TH74 334 aa10.8□□□□□ -0.68
VCP-204ENST00000466100 ANKS6Q68DC2 871 aa10.8□□□□□ -0.68
VCP-204ENST00000466100 SULT1C3Q6IMI6 304 aa10.8□□□□□ -0.68
VCP-204ENST00000466100 GUSBP11Q6P575 273 aa10.8□□□□□ -0.68
VCP-204ENST00000466100 TTC23LQ6PF05 361 aa10.8□□□□□ -0.68
VCP-204ENST00000466100 PIP4P1Q86T03 277 aa10.8□□□□□ -0.68
VCP-204ENST00000466100 ZNF761Q86XN6 746 aaPredicted RBP10.8□□□□□ -0.68
VCP-204ENST00000466100 ADGRF3Q8IZF5 1079 aa10.8□□□□□ -0.68
VCP-204ENST00000466100 FBXO39Q8N4B4 442 aa10.8□□□□□ -0.68
VCP-204ENST00000466100 LMNTD1Q8N9Z9 388 aa10.8□□□□□ -0.68
VCP-204ENST00000466100 OR2L8Q8NGY9 312 aa10.8□□□□□ -0.68
VCP-204ENST00000466100 OR56A3Q8NH54 315 aa10.8□□□□□ -0.68
VCP-204ENST00000466100 RAB11FIP5Q9BXF6 653 aa10.8□□□□□ -0.68
VCP-204ENST00000466100 TBC1D10AQ9BXI6 508 aa10.8□□□□□ -0.68
VCP-204ENST00000466100 C1QTNF3Q9BXJ4 246 aa10.8□□□□□ -0.68
VCP-204ENST00000466100 TRIM54Q9BYV2 358 aa10.8□□□□□ -0.68
VCP-204ENST00000466100 XKR8Q9H6D3 395 aa10.8□□□□□ -0.68
VCP-204ENST00000466100 KCNK9Q9NPC2 374 aa10.8□□□□□ -0.68
VCP-204ENST00000466100 NCKIPSDQ9NZQ3 722 aa10.8□□□□□ -0.68
VCP-204ENST00000466100 CD274Q9NZQ7 290 aa10.8□□□□□ -0.68
VCP-204ENST00000466100 OGFRQ9NZT2 677 aa10.8□□□□□ -0.68
VCP-204ENST00000466100 LRIT1Q9P2V4 623 aa10.8□□□□□ -0.68
VCP-204ENST00000466100 TMCO1Q9UM00 188 aa10.8□□□□□ -0.68
VCP-204ENST00000466100 PADI4Q9UM07 663 aa10.8□□□□□ -0.68
VCP-204ENST00000466100 STX16-NPEPL1H3BU86 382 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 STX16O14662 325 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 PRICKLE3O43900 615 aaPredicted RBP10.79□□□□□ -0.68
VCP-204ENST00000466100 SH3BP5O60239 455 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 SMIM24O75264 130 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 BPGMP07738 259 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 RPS17P08708 135 aaKnown RBP10.79□□□□□ -0.68
VCP-204ENST00000466100 HIST1H2AGP0C0S8 130 aaPredicted RBP10.79□□□□□ -0.68
VCP-204ENST00000466100 MYL2P10916 166 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 GFAPP14136 432 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 CPA3P15088 417 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 PNLIPP16233 465 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 HIST1H2ADP20671 130 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 SHMT2P34897 504 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 HSD17B2P37059 387 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 GPR3P46089 330 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 SERPINB4P48594 390 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 HNMTP50135 292 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 PRKAA2P54646 552 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 EPHA4P54764 986 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 TBPL1P62380 186 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 GPS2Q13227 327 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 FASTKQ14296 549 aaKnown RBP10.79□□□□□ -0.68
VCP-204ENST00000466100 PCBP2Q15366 365 aaKnown RBP eCLIP10.79□□□□□ -0.68
VCP-204ENST00000466100 PFKFB4Q16877 469 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 PERM1Q5SV97 790 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 AGTRAPQ6RW13 159 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 SPRED1Q7Z699 444 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 TCAIMQ8N3R3 496 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 PTGR2Q8N8N7 351 aaPredicted RBP10.79□□□□□ -0.68
VCP-204ENST00000466100 ANKRD42Q8N9B4 389 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 PPFIBP2Q8ND30 876 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 OR6C4Q8NGE1 309 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 OR6Y1Q8NGX8 325 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 FLVCR1-AS1Q8TAF5 88 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 MDM1Q8TC05 714 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 LCN9Q8WX39 176 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 ATL1Q8WXF7 558 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 RSC1A1Q92681 617 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 NAT6Q93015 286 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 CCDC74AQ96AQ1 378 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 SH3KBP1Q96B97 665 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 HIST1H2AHQ96KK5 128 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 CNDP2Q96KP4 475 aaKnown RBP10.79□□□□□ -0.68
VCP-204ENST00000466100 HIST1H2AJQ99878 128 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 EGFL8Q99944 293 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 SELENOSQ9BQE4 189 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 H2AFJQ9BTM1 129 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 MECRQ9BV79 373 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 SGPP1Q9BX95 441 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.79□□□□□ -0.68
VCP-204ENST00000466100 STN1Q9H668 368 aaKnown RBP10.79□□□□□ -0.68
VCP-204ENST00000466100 CNOT10Q9H9A5 744 aaKnown RBP10.79□□□□□ -0.68
VCP-204ENST00000466100 OXSMQ9NWU1 459 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 OR6C2Q9NZP2 312 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 MID2Q9UJV3 735 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 WDFY3Q8IZQ1 3526 aa10.79□□□□□ -0.68
VCP-204ENST00000466100 IGHV1OR21-1A0A087WYE8 117 aa10.78□□□□□ -0.68
VCP-204ENST00000466100 OR5K3A6NET4 321 aa10.78□□□□□ -0.68
VCP-204ENST00000466100 LRRC14BA6NHZ5 514 aa10.78□□□□□ -0.68
VCP-204ENST00000466100 RHPN2P1A8MT19 583 aa10.78□□□□□ -0.68
VCP-204ENST00000466100 BTN3A3O00478 584 aa10.78□□□□□ -0.68
VCP-204ENST00000466100 CASC3O15234 703 aaKnown RBP10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms