RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 TCERG1O14776 1098 aaKnown RBP5.28□□□□□ -1.56
PTCD3-205ENST00000464541 C22orf31O95567 290 aa5.28□□□□□ -1.56
PTCD3-205ENST00000464541 CEBPBP17676 345 aa5.28□□□□□ -1.56
PTCD3-205ENST00000464541 PCGF2P35227 344 aa5.28□□□□□ -1.56
PTCD3-205ENST00000464541 CSE1LP55060 971 aaKnown RBP5.28□□□□□ -1.56
PTCD3-205ENST00000464541 RRS1Q15050 365 aaKnown RBP5.28□□□□□ -1.56
PTCD3-205ENST00000464541 MFSD12Q6NUT3 480 aa5.28□□□□□ -1.56
PTCD3-205ENST00000464541 TMPRSS11BQ86T26 416 aa5.28□□□□□ -1.56
PTCD3-205ENST00000464541 CTCFLQ8NI51 663 aaPredicted RBP5.28□□□□□ -1.56
PTCD3-205ENST00000464541 GMPPAQ96IJ6 420 aaPredicted RBP5.28□□□□□ -1.56
PTCD3-205ENST00000464541 WDR13Q9H1Z4 485 aa5.28□□□□□ -1.56
PTCD3-205ENST00000464541 TRPV4Q9HBA0 871 aa5.28□□□□□ -1.56
PTCD3-205ENST00000464541 DAPK2Q9UIK4 370 aa5.28□□□□□ -1.56
PTCD3-205ENST00000464541 RIPK3Q9Y572 518 aa5.28□□□□□ -1.56
PTCD3-205ENST00000464541 ASCL1P50553 236 aa5.27□□□□□ -1.57
PTCD3-205ENST00000464541 HNRNPKP61978 463 aaKnown RBP eCLIP5.27□□□□□ -1.57
PTCD3-205ENST00000464541 PRPF4BQ13523 1007 aaKnown RBP5.27□□□□□ -1.57
PTCD3-205ENST00000464541 FCN2Q15485 313 aa5.27□□□□□ -1.57
PTCD3-205ENST00000464541 CA9Q16790 459 aa5.27□□□□□ -1.57
PTCD3-205ENST00000464541 TMEM266Q2M3C6 531 aa5.27□□□□□ -1.57
PTCD3-205ENST00000464541 KLHL26Q53HC5 615 aa5.27□□□□□ -1.57
PTCD3-205ENST00000464541 ARMC4Q5T2S8 1044 aa5.27□□□□□ -1.57
PTCD3-205ENST00000464541 CYP4A22Q5TCH4 519 aa5.27□□□□□ -1.57
PTCD3-205ENST00000464541 ZNF843Q8N446 348 aa5.27□□□□□ -1.57
PTCD3-205ENST00000464541 OR2T11Q8NH01 316 aa5.27□□□□□ -1.57
PTCD3-205ENST00000464541 SYN2Q92777 582 aaPredicted RBP5.27□□□□□ -1.57
PTCD3-205ENST00000464541 MOB3AQ96BX8 217 aa5.27□□□□□ -1.57
PTCD3-205ENST00000464541 CFAP57Q96MR6 1250 aa5.27□□□□□ -1.57
PTCD3-205ENST00000464541 ATAD3AQ9NVI7 634 aa5.27□□□□□ -1.57
PTCD3-205ENST00000464541 NTN3O00634 580 aaPredicted RBP5.26□□□□□ -1.57
PTCD3-205ENST00000464541 PTGESO14684 152 aa5.26□□□□□ -1.57
PTCD3-205ENST00000464541 KHDRBS3O75525 346 aaKnown RBP5.26□□□□□ -1.57
PTCD3-205ENST00000464541 CDC123O75794 336 aaPredicted RBP5.26□□□□□ -1.57
PTCD3-205ENST00000464541 RAF1P04049 648 aa5.26□□□□□ -1.57
PTCD3-205ENST00000464541 HAPLN1P10915 354 aaPredicted RBP5.26□□□□□ -1.57
PTCD3-205ENST00000464541 EEF1B2P24534 225 aaKnown RBP5.26□□□□□ -1.57
PTCD3-205ENST00000464541 BMXP51813 675 aa5.26□□□□□ -1.57
PTCD3-205ENST00000464541 LIMK1P53667 647 aa5.26□□□□□ -1.57
PTCD3-205ENST00000464541 PPARDQ03181 441 aa5.26□□□□□ -1.57
PTCD3-205ENST00000464541 AIMP1Q12904 312 aaKnown RBP5.26□□□□□ -1.57
PTCD3-205ENST00000464541 ZFP69Q49AA0 526 aa5.26□□□□□ -1.57
PTCD3-205ENST00000464541 SPDYCQ5MJ68 293 aa5.26□□□□□ -1.57
PTCD3-205ENST00000464541 ZC2HC1BQ5TFG8 222 aa5.26□□□□□ -1.57
PTCD3-205ENST00000464541 IQCHQ86VS3 1027 aa5.26□□□□□ -1.57
PTCD3-205ENST00000464541 NIPA2Q8N8Q9 360 aa5.26□□□□□ -1.57
PTCD3-205ENST00000464541 LRRC3BQ96PB8 259 aa5.26□□□□□ -1.57
PTCD3-205ENST00000464541 URM1Q9BTM9 101 aaKnown RBP5.26□□□□□ -1.57
PTCD3-205ENST00000464541 MTMR12Q9C0I1 747 aa5.26□□□□□ -1.57
PTCD3-205ENST00000464541 CNOT10Q9H9A5 744 aaKnown RBP5.26□□□□□ -1.57
PTCD3-205ENST00000464541 ERVMER34-1Q9H9K5 563 aa5.26□□□□□ -1.57
PTCD3-205ENST00000464541 A0A087X002 238 aa5.25□□□□□ -1.57
PTCD3-205ENST00000464541 A0A1W2PPM1 405 aa5.25□□□□□ -1.57
PTCD3-205ENST00000464541 C2orf81A6NN90 581 aa5.25□□□□□ -1.57
PTCD3-205ENST00000464541 TRIM77I1YAP6 450 aa5.25□□□□□ -1.57
PTCD3-205ENST00000464541 O00370 1275 aa5.25□□□□□ -1.57
PTCD3-205ENST00000464541 GPIP06744 558 aa5.25□□□□□ -1.57
PTCD3-205ENST00000464541 KLC1Q07866 573 aa5.25□□□□□ -1.57
PTCD3-205ENST00000464541 ITGA7Q13683 1181 aa5.25□□□□□ -1.57
PTCD3-205ENST00000464541 TOMM20Q15388 145 aa5.25□□□□□ -1.57
PTCD3-205ENST00000464541 VWC2Q2TAL6 325 aa5.25□□□□□ -1.57
PTCD3-205ENST00000464541 LETM2Q2VYF4 491 aa5.25□□□□□ -1.57
PTCD3-205ENST00000464541 UGT3A2Q3SY77 523 aa5.25□□□□□ -1.57
PTCD3-205ENST00000464541 PHLDA2Q53GA4 152 aa5.25□□□□□ -1.57
PTCD3-205ENST00000464541 ADAMTSL4-AS1Q5T5F5 129 aa5.25□□□□□ -1.57
PTCD3-205ENST00000464541 C6orf163Q5TEZ5 329 aa5.25□□□□□ -1.57
PTCD3-205ENST00000464541 RBPMS2Q6ZRY4 209 aaKnown RBP5.25□□□□□ -1.57
PTCD3-205ENST00000464541 DET1Q7L5Y6 550 aa5.25□□□□□ -1.57
PTCD3-205ENST00000464541 CENPVQ7Z7K6 275 aaPredicted RBP5.25□□□□□ -1.57
PTCD3-205ENST00000464541 XXYLT1Q8NBI6 393 aa5.25□□□□□ -1.57
PTCD3-205ENST00000464541 OR11H4Q8NGC9 324 aa5.25□□□□□ -1.57
PTCD3-205ENST00000464541 PGAP3Q96FM1 320 aaPredicted RBP5.25□□□□□ -1.57
PTCD3-205ENST00000464541 ART5Q96L15 291 aa5.25□□□□□ -1.57
PTCD3-205ENST00000464541 TXLNGYQ9BZA5 131 aa5.25□□□□□ -1.57
PTCD3-205ENST00000464541 P2RY12Q9H244 342 aa5.25□□□□□ -1.57
PTCD3-205ENST00000464541 MYNNQ9NPC7 610 aa5.25□□□□□ -1.57
PTCD3-205ENST00000464541 ZDHHC18Q9NUE0 388 aa5.25□□□□□ -1.57
PTCD3-205ENST00000464541 P4HA2O15460 535 aa5.24□□□□□ -1.57
PTCD3-205ENST00000464541 ARHGEF9O43307 516 aa5.24□□□□□ -1.57
PTCD3-205ENST00000464541 PSMD10O75832 226 aa5.24□□□□□ -1.57
PTCD3-205ENST00000464541 SERPINB2P05120 415 aa5.24□□□□□ -1.57
PTCD3-205ENST00000464541 MYBL1P10243 752 aa5.24□□□□□ -1.57
PTCD3-205ENST00000464541 SAGP10523 405 aaPredicted RBP5.24□□□□□ -1.57
PTCD3-205ENST00000464541 CDH3P22223 829 aa5.24□□□□□ -1.57
PTCD3-205ENST00000464541 MPZP25189 248 aa5.24□□□□□ -1.57
PTCD3-205ENST00000464541 PTPN3P26045 913 aa5.24□□□□□ -1.57
PTCD3-205ENST00000464541 RAB28P51157 221 aa5.24□□□□□ -1.57
PTCD3-205ENST00000464541 RALGDSQ12967 914 aa5.24□□□□□ -1.57
PTCD3-205ENST00000464541 CUL3Q13618 768 aa5.24□□□□□ -1.57
PTCD3-205ENST00000464541 KRT80Q6KB66 452 aa5.24□□□□□ -1.57
PTCD3-205ENST00000464541 SLC30A6Q6NXT4 461 aa5.24□□□□□ -1.57
PTCD3-205ENST00000464541 ARHGAP22Q7Z5H3 698 aa5.24□□□□□ -1.57
PTCD3-205ENST00000464541 CDK20Q8IZL9 346 aa5.24□□□□□ -1.57
PTCD3-205ENST00000464541 KIRREL3Q8IZU9 778 aa5.24□□□□□ -1.57
PTCD3-205ENST00000464541 LSMEM1Q8N8F7 131 aa5.24□□□□□ -1.57
PTCD3-205ENST00000464541 THAP8Q8NA92 274 aa5.24□□□□□ -1.57
PTCD3-205ENST00000464541 TMEM178AQ8NBL3 297 aa5.24□□□□□ -1.57
PTCD3-205ENST00000464541 KCTD6Q8NC69 237 aa5.24□□□□□ -1.57
PTCD3-205ENST00000464541 OR5AP2Q8NGF4 316 aa5.24□□□□□ -1.57
PTCD3-205ENST00000464541 OR4C3Q8NH37 302 aa5.24□□□□□ -1.57
PTCD3-205ENST00000464541 HDAC11Q96DB2 347 aa5.24□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms