RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 IMPACTQ9P2X3 320 aa21.74■■□□□ 1.07
USP4-208ENST00000464168 FBXL4Q9UKA2 621 aa21.74■■□□□ 1.07
USP4-208ENST00000464168 CSAG2Q9Y5P2 127 aa21.74■■□□□ 1.07
USP4-208ENST00000464168 EPN1Q9Y6I3 576 aaPredicted RBP21.74■■□□□ 1.07
USP4-208ENST00000464168 PSMD3O43242 534 aa21.73■■□□□ 1.07
USP4-208ENST00000464168 ONECUT2O95948 504 aa21.73■■□□□ 1.07
USP4-208ENST00000464168 MMP11P24347 488 aa21.73■■□□□ 1.07
USP4-208ENST00000464168 ITGA3P26006 1051 aa21.73■■□□□ 1.07
USP4-208ENST00000464168 PKLRP30613 574 aa21.73■■□□□ 1.07
USP4-208ENST00000464168 NAP1L1P55209 391 aaKnown RBP21.73■■□□□ 1.07
USP4-208ENST00000464168 ELOAQ14241 798 aaKnown RBP21.73■■□□□ 1.07
USP4-208ENST00000464168 TTLL10Q6ZVT0 673 aa21.73■■□□□ 1.07
USP4-208ENST00000464168 OVCH1Q7RTY7 1134 aa21.73■■□□□ 1.07
USP4-208ENST00000464168 TAB3Q8N5C8 712 aaPredicted RBP21.73■■□□□ 1.07
USP4-208ENST00000464168 LMNTD1Q8N9Z9 388 aa21.73■■□□□ 1.07
USP4-208ENST00000464168 OR13J1Q8NGT2 312 aa21.73■■□□□ 1.07
USP4-208ENST00000464168 MENTQ9BUN1 341 aa21.73■■□□□ 1.07
USP4-208ENST00000464168 SLC6A20Q9NP91 592 aa21.73■■□□□ 1.07
USP4-208ENST00000464168 BTNL10A8MVZ5 291 aa21.72■■□□□ 1.07
USP4-208ENST00000464168 KDM1AO60341 852 aa21.72■■□□□ 1.07
USP4-208ENST00000464168 RAB28P51157 221 aa21.72■■□□□ 1.07
USP4-208ENST00000464168 CSE1LP55060 971 aaKnown RBP21.72■■□□□ 1.07
USP4-208ENST00000464168 HIF1AQ16665 826 aa21.72■■□□□ 1.07
USP4-208ENST00000464168 P3H1Q32P28 736 aa21.72■■□□□ 1.07
USP4-208ENST00000464168 DNAJC21Q5F1R6 531 aaKnown RBP21.72■■□□□ 1.07
USP4-208ENST00000464168 PRAMEF13Q5VWM6 474 aa21.72■■□□□ 1.07
USP4-208ENST00000464168 VRK3Q8IV63 474 aa21.72■■□□□ 1.07
USP4-208ENST00000464168 SLC22A15Q8IZD6 547 aa21.72■■□□□ 1.07
USP4-208ENST00000464168 TTC13Q8NBP0 860 aa21.72■■□□□ 1.07
USP4-208ENST00000464168 DLG3Q92796 817 aa21.72■■□□□ 1.07
USP4-208ENST00000464168 FKBP10Q96AY3 582 aa21.72■■□□□ 1.07
USP4-208ENST00000464168 WDR77Q9BQA1 342 aaPredicted RBP21.72■■□□□ 1.07
USP4-208ENST00000464168 TMEM121Q9BTD3 319 aa21.72■■□□□ 1.07
USP4-208ENST00000464168 LACRTQ9GZZ8 138 aa21.72■■□□□ 1.07
USP4-208ENST00000464168 R3HDM2Q9Y2K5 976 aaKnown RBP21.72■■□□□ 1.07
USP4-208ENST00000464168 REXO2Q9Y3B8 237 aaKnown RBP21.72■■□□□ 1.07
USP4-208ENST00000464168 DIDO1Q9BTC0 2240 aaKnown RBP21.72■■□□□ 1.07
USP4-208ENST00000464168 A0A1B0GX78 115 aa21.71■■□□□ 1.07
USP4-208ENST00000464168 GRID2IPA4D2P6 1211 aa21.71■■□□□ 1.07
USP4-208ENST00000464168 SOWAHDA6NJG2 315 aa21.71■■□□□ 1.07
USP4-208ENST00000464168 SOCS6O14544 535 aa21.71■■□□□ 1.07
USP4-208ENST00000464168 ALOX12BO75342 701 aa21.71■■□□□ 1.07
USP4-208ENST00000464168 ALBP02768 609 aa21.71■■□□□ 1.07
USP4-208ENST00000464168 CCR7P32248 378 aa21.71■■□□□ 1.07
USP4-208ENST00000464168 ARSFP54793 590 aa21.71■■□□□ 1.07
USP4-208ENST00000464168 SKOR2Q2VWA4 1001 aaPredicted RBP21.71■■□□□ 1.07
USP4-208ENST00000464168 IGFL2Q6UWQ7 119 aa21.71■■□□□ 1.07
USP4-208ENST00000464168 COX15Q7KZN9 410 aa21.71■■□□□ 1.07
USP4-208ENST00000464168 C2orf73Q8N5S3 287 aaPredicted RBP21.71■■□□□ 1.07
USP4-208ENST00000464168 OR52K1Q8NGK4 314 aa21.71■■□□□ 1.07
USP4-208ENST00000464168 SLC35B2Q8TB61 432 aa21.71■■□□□ 1.07
USP4-208ENST00000464168 HDAC10Q969S8 669 aa21.71■■□□□ 1.07
USP4-208ENST00000464168 WDR54Q9H977 334 aa21.71■■□□□ 1.07
USP4-208ENST00000464168 AGPAT4Q9NRZ5 378 aa21.71■■□□□ 1.07
USP4-208ENST00000464168 SLC2A6Q9UGQ3 507 aa21.71■■□□□ 1.07
USP4-208ENST00000464168 CDC23Q9UJX2 597 aa21.71■■□□□ 1.07
USP4-208ENST00000464168 NOVA2Q9UNW9 492 aaKnown RBP21.71■■□□□ 1.07
USP4-208ENST00000464168 GOLGA6L9A6NEM1 432 aa21.7■■□□□ 1.06
USP4-208ENST00000464168 CD9P21926 228 aa21.7■■□□□ 1.06
USP4-208ENST00000464168 HSPA14Q0VDF9 509 aa21.7■■□□□ 1.06
USP4-208ENST00000464168 KLF1Q13351 362 aaPredicted RBP21.7■■□□□ 1.06
USP4-208ENST00000464168 GRB7Q14451 532 aa21.7■■□□□ 1.06
USP4-208ENST00000464168 NKG7Q16617 165 aa21.7■■□□□ 1.06
USP4-208ENST00000464168 FCRL6Q6DN72 434 aa21.7■■□□□ 1.06
USP4-208ENST00000464168 KIRREL2Q6UWL6 708 aa21.7■■□□□ 1.06
USP4-208ENST00000464168 LINC00523Q86TU6 105 aa21.7■■□□□ 1.06
USP4-208ENST00000464168 KCNMB4Q86W47 210 aa21.7■■□□□ 1.06
USP4-208ENST00000464168 ST6GALNAC3Q8NDV1 305 aa21.7■■□□□ 1.06
USP4-208ENST00000464168 PPP4R1Q8TF05 950 aa21.7■■□□□ 1.06
USP4-208ENST00000464168 ZDHHC19Q8WVZ1 309 aaPredicted RBP21.7■■□□□ 1.06
USP4-208ENST00000464168 SPSB2Q99619 263 aa21.7■■□□□ 1.06
USP4-208ENST00000464168 TRIM5Q9C035 493 aa21.7■■□□□ 1.06
USP4-208ENST00000464168 SLC26A1Q9H2B4 701 aa21.7■■□□□ 1.06
USP4-208ENST00000464168 CIDEBQ9UHD4 219 aa21.7■■□□□ 1.06
USP4-208ENST00000464168 HS3ST3B1Q9Y662 390 aa21.7■■□□□ 1.06
USP4-208ENST00000464168 DOCK10Q96BY6 2186 aa21.7■■□□□ 1.06
USP4-208ENST00000464168 ENO4A6NNW6 628 aa21.69■■□□□ 1.06
USP4-208ENST00000464168 GPC4O75487 556 aa21.69■■□□□ 1.06
USP4-208ENST00000464168 GOT2P00505 430 aaKnown RBP21.69■■□□□ 1.06
USP4-208ENST00000464168 MCM3P25205 808 aa21.69■■□□□ 1.06
USP4-208ENST00000464168 GRIA3P42263 894 aa21.69■■□□□ 1.06
USP4-208ENST00000464168 AGAP7PQ5VUJ5 663 aa21.69■■□□□ 1.06
USP4-208ENST00000464168 FIGLAQ6QHK4 219 aa21.69■■□□□ 1.06
USP4-208ENST00000464168 CFAP61Q8NHU2 1237 aa21.69■■□□□ 1.06
USP4-208ENST00000464168 LKAAEAR1Q8TD35 194 aa21.69■■□□□ 1.06
USP4-208ENST00000464168 DENND1AQ8TEH3 1009 aa21.69■■□□□ 1.06
USP4-208ENST00000464168 SLC22A18Q96BI1 424 aa21.69■■□□□ 1.06
USP4-208ENST00000464168 AGAP4Q96P64 663 aa21.69■■□□□ 1.06
USP4-208ENST00000464168 IL17FQ96PD4 163 aa21.69■■□□□ 1.06
USP4-208ENST00000464168 ENAMQ9NRM1 1142 aa21.69■■□□□ 1.06
USP4-208ENST00000464168 CUTCQ9NTM9 273 aa21.69■■□□□ 1.06
USP4-208ENST00000464168 PCM1Q15154 2024 aa21.68■■□□□ 1.06
USP4-208ENST00000464168 CSMD1Q96PZ7 3565 aa21.68■■□□□ 1.06
USP4-208ENST00000464168 TCRBV7S2A1N4TA0A589 114 aa21.68■■□□□ 1.06
USP4-208ENST00000464168 HEATR9A2RTY3 570 aa21.68■■□□□ 1.06
USP4-208ENST00000464168 DSCR3O14972 297 aa21.68■■□□□ 1.06
USP4-208ENST00000464168 PTMAP06454 111 aaKnown RBP21.68■■□□□ 1.06
USP4-208ENST00000464168 PIM1P11309 404 aaPredicted RBP21.68■■□□□ 1.06
USP4-208ENST00000464168 CDH17Q12864 832 aa21.68■■□□□ 1.06
USP4-208ENST00000464168 TSTD2Q5T7W7 516 aa21.68■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms