RNA–Protein interactions for RNA: ENST00000462306.5

ERCC3-206, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 1 (best)

Gene ERCC3, Length 963 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-206ENST00000462306 LARP7Q4G0J3 582 aaKnown RBP eCLIP15.31■□□□□ 0.04
ERCC3-206ENST00000462306 TMTC4Q5T4D3 741 aa15.31■□□□□ 0.04
ERCC3-206ENST00000462306 HECTD2Q5U5R9 776 aa15.31■□□□□ 0.04
ERCC3-206ENST00000462306 UGT3A1Q6NUS8 523 aa15.31■□□□□ 0.04
ERCC3-206ENST00000462306 PAQR3Q6TCH7 311 aa15.31■□□□□ 0.04
ERCC3-206ENST00000462306 CYS1Q717R9 158 aa15.31■□□□□ 0.04
ERCC3-206ENST00000462306 TIPARPQ7Z3E1 657 aaKnown RBP15.31■□□□□ 0.04
ERCC3-206ENST00000462306 STRA8Q7Z7C7 330 aa15.31■□□□□ 0.04
ERCC3-206ENST00000462306 SLC26A11Q86WA9 606 aa15.31■□□□□ 0.04
ERCC3-206ENST00000462306 ZC3HC1Q86WB0 502 aaKnown RBP15.31■□□□□ 0.04
ERCC3-206ENST00000462306 CCDC25Q86WR0 208 aa15.31■□□□□ 0.04
ERCC3-206ENST00000462306 PPP1R3BQ86XI6 285 aa15.31■□□□□ 0.04
ERCC3-206ENST00000462306 C2orf73Q8N5S3 287 aaPredicted RBP15.31■□□□□ 0.04
ERCC3-206ENST00000462306 FBXO15Q8NCQ5 510 aaPredicted RBP15.31■□□□□ 0.04
ERCC3-206ENST00000462306 HMGCLL1Q8TB92 370 aa15.31■□□□□ 0.04
ERCC3-206ENST00000462306 MAGEC3Q8TD91 643 aa15.31■□□□□ 0.04
ERCC3-206ENST00000462306 NKD1Q969G9 470 aa15.31■□□□□ 0.04
ERCC3-206ENST00000462306 ZNF501Q96CX3 271 aaPredicted RBP15.31■□□□□ 0.04
ERCC3-206ENST00000462306 RAB11FIP5Q9BXF6 653 aa15.31■□□□□ 0.04
ERCC3-206ENST00000462306 KLHL25Q9H0H3 589 aa15.31■□□□□ 0.04
ERCC3-206ENST00000462306 PDE7BQ9NP56 450 aa15.31■□□□□ 0.04
ERCC3-206ENST00000462306 SOHLH2Q9NX45 425 aa15.31■□□□□ 0.04
ERCC3-206ENST00000462306 SLC39A10Q9ULF5 831 aa15.31■□□□□ 0.04
ERCC3-206ENST00000462306 ITPR1Q14643 2758 aa15.3■□□□□ 0.04
ERCC3-206ENST00000462306 A0A0J9YY10 115 aa15.3■□□□□ 0.04
ERCC3-206ENST00000462306 TCRBV9S1A1TA0A576 114 aa15.3■□□□□ 0.04
ERCC3-206ENST00000462306 CXorf49A8MYA2 514 aaPredicted RBP15.3■□□□□ 0.04
ERCC3-206ENST00000462306 ISM1B1AKI9 464 aa15.3■□□□□ 0.04
ERCC3-206ENST00000462306 MYO1CO00159 1063 aa15.3■□□□□ 0.04
ERCC3-206ENST00000462306 EFSO43281 561 aa15.3■□□□□ 0.04
ERCC3-206ENST00000462306 SPAG6O75602 509 aa15.3■□□□□ 0.04
ERCC3-206ENST00000462306 PIAS1O75925 651 aa15.3■□□□□ 0.04
ERCC3-206ENST00000462306 TIAF1O95411 115 aa15.3■□□□□ 0.04
ERCC3-206ENST00000462306 CATP04040 527 aaKnown RBP15.3■□□□□ 0.04
ERCC3-206ENST00000462306 GSTA2P09210 222 aa15.3■□□□□ 0.04
ERCC3-206ENST00000462306 MSL3P1P0C860 447 aa15.3■□□□□ 0.04
ERCC3-206ENST00000462306 ERGP11308 486 aa15.3■□□□□ 0.04
ERCC3-206ENST00000462306 FDXRP22570 491 aa15.3■□□□□ 0.04
ERCC3-206ENST00000462306 PGGT1BP53609 377 aa15.3■□□□□ 0.04
ERCC3-206ENST00000462306 TUBB4BP68371 445 aa15.3■□□□□ 0.04
ERCC3-206ENST00000462306 SRSF6Q13247 344 aaKnown RBP15.3■□□□□ 0.04
ERCC3-206ENST00000462306 GPR19Q15760 415 aa15.3■□□□□ 0.04
ERCC3-206ENST00000462306 ZIC1Q15915 447 aa15.3■□□□□ 0.04
ERCC3-206ENST00000462306 CYP2A13Q16696 494 aa15.3■□□□□ 0.04
ERCC3-206ENST00000462306 GLE1Q53GS7 698 aaKnown RBP15.3■□□□□ 0.04
ERCC3-206ENST00000462306 BROXQ5VW32 411 aa15.3■□□□□ 0.04
ERCC3-206ENST00000462306 CYB5D1Q6P9G0 228 aa15.3■□□□□ 0.04
ERCC3-206ENST00000462306 C3orf62Q6ZUJ4 267 aa15.3■□□□□ 0.04
ERCC3-206ENST00000462306 PIWIL4Q7Z3Z4 852 aaKnown RBP15.3■□□□□ 0.04
ERCC3-206ENST00000462306 BPHLQ86WA6 291 aaPredicted RBP15.3■□□□□ 0.04
ERCC3-206ENST00000462306 GPATCH11Q8N954 259 aa15.3■□□□□ 0.04
ERCC3-206ENST00000462306 OR9A1PQ8NGU1 263 aa15.3■□□□□ 0.04
ERCC3-206ENST00000462306 EEF1AKMT1Q8WVE0 214 aa15.3■□□□□ 0.04
ERCC3-206ENST00000462306 FCRL4Q96PJ5 515 aa15.3■□□□□ 0.04
ERCC3-206ENST00000462306 CCNL2Q96S94 520 aaPredicted RBP15.3■□□□□ 0.04
ERCC3-206ENST00000462306 OLFM1Q99784 485 aa15.3■□□□□ 0.04
ERCC3-206ENST00000462306 PRORYQ9H606 182 aa15.3■□□□□ 0.04
ERCC3-206ENST00000462306 FAM114A2Q9NRY5 505 aa15.3■□□□□ 0.04
ERCC3-206ENST00000462306 NSMCE4AQ9NXX6 385 aa15.3■□□□□ 0.04
ERCC3-206ENST00000462306 SPATA7Q9P0W8 599 aa15.3■□□□□ 0.04
ERCC3-206ENST00000462306 RARRES3Q9UL19 164 aa15.3■□□□□ 0.04
ERCC3-206ENST00000462306 VWA7Q9Y334 891 aa15.3■□□□□ 0.04
ERCC3-206ENST00000462306 TEX51A0A1B0GUA7 166 aa15.29■□□□□ 0.04
ERCC3-206ENST00000462306 A0A1W2PPV9 198 aa15.29■□□□□ 0.04
ERCC3-206ENST00000462306 FAM159BA6NKW6 160 aa15.29■□□□□ 0.04
ERCC3-206ENST00000462306 RAD1O60671 282 aa15.29■□□□□ 0.04
ERCC3-206ENST00000462306 TSPAN12O95859 305 aa15.29■□□□□ 0.04
ERCC3-206ENST00000462306 UCNP55089 124 aa15.29■□□□□ 0.04
ERCC3-206ENST00000462306 TMPRSS3P57727 454 aa15.29■□□□□ 0.04
ERCC3-206ENST00000462306 FAM45BPQ6NSW5 357 aa15.29■□□□□ 0.04
ERCC3-206ENST00000462306 PWWP2BQ6NUJ5 590 aa15.29■□□□□ 0.04
ERCC3-206ENST00000462306 CDHR3Q6ZTQ4 885 aa15.29■□□□□ 0.04
ERCC3-206ENST00000462306 VASH2Q86V25 355 aa15.29■□□□□ 0.04
ERCC3-206ENST00000462306 TAX1BP1Q86VP1 789 aa15.29■□□□□ 0.04
ERCC3-206ENST00000462306 FAM20CQ8IXL6 584 aa15.29■□□□□ 0.04
ERCC3-206ENST00000462306 CEP112Q8N8E3 955 aa15.29■□□□□ 0.04
ERCC3-206ENST00000462306 C19orf47Q8N9M1 422 aaKnown RBP15.29■□□□□ 0.04
ERCC3-206ENST00000462306 FAM45AQ8TCE6 357 aa15.29■□□□□ 0.04
ERCC3-206ENST00000462306 DLG3Q92796 817 aa15.29■□□□□ 0.04
ERCC3-206ENST00000462306 SLC22A18Q96BI1 424 aa15.29■□□□□ 0.04
ERCC3-206ENST00000462306 RNF31Q96EP0 1072 aa15.29■□□□□ 0.04
ERCC3-206ENST00000462306 PKP4Q99569 1192 aa15.29■□□□□ 0.04
ERCC3-206ENST00000462306 ULBP3Q9BZM4 244 aa15.29■□□□□ 0.04
ERCC3-206ENST00000462306 CHRNA10Q9GZZ6 450 aa15.29■□□□□ 0.04
ERCC3-206ENST00000462306 CPNE5Q9HCH3 593 aa15.29■□□□□ 0.04
ERCC3-206ENST00000462306 LRRC4CQ9HCJ2 640 aa15.29■□□□□ 0.04
ERCC3-206ENST00000462306 FAM60AQ9NP50 221 aa15.29■□□□□ 0.04
ERCC3-206ENST00000462306 KIAA0754O94854 1291 aa15.28■□□□□ 0.04
ERCC3-206ENST00000462306 MAP4P27816 1152 aaKnown RBP15.28■□□□□ 0.04
ERCC3-206ENST00000462306 GABRA4P48169 554 aa15.28■□□□□ 0.04
ERCC3-206ENST00000462306 RGS4P49798 205 aa15.28■□□□□ 0.04
ERCC3-206ENST00000462306 ATP1A2P50993 1020 aa15.28■□□□□ 0.04
ERCC3-206ENST00000462306 MAP7Q14244 749 aa15.28■□□□□ 0.04
ERCC3-206ENST00000462306 FASTKQ14296 549 aaKnown RBP15.28■□□□□ 0.04
ERCC3-206ENST00000462306 LRRC8EQ6NSJ5 796 aa15.28■□□□□ 0.04
ERCC3-206ENST00000462306 CACNA2D3Q8IZS8 1091 aa15.28■□□□□ 0.04
ERCC3-206ENST00000462306 NLGN4XQ8N0W4 816 aa15.28■□□□□ 0.04
ERCC3-206ENST00000462306 RAB42Q8N4Z0 105 aa15.28■□□□□ 0.04
ERCC3-206ENST00000462306 NLGN4YQ8NFZ3 816 aaPredicted RBP15.28■□□□□ 0.04
ERCC3-206ENST00000462306 OR8K5Q8NH50 307 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms