RNA–Protein interactions for RNA: ENST00000461507.5

FDPS-204, Transcript of farnesyl diphosphate synthase, human

TSL 2

Gene FDPS, Length 1,022 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FDPS-204	ENST00000461507	VPS26A	O75436	327 aa		12.31	□□□□□ -0.44
FDPS-204	ENST00000461507	SPAG6	O75602	509 aa		12.31	□□□□□ -0.44
FDPS-204	ENST00000461507	HAUS5	O94927	633 aa		12.31	□□□□□ -0.44
FDPS-204	ENST00000461507	MT-ND3	P03897	115 aa		12.31	□□□□□ -0.44
FDPS-204	ENST00000461507	TCN2	P20062	427 aa		12.31	□□□□□ -0.44
FDPS-204	ENST00000461507	SAT1	P21673	171 aa		12.31	□□□□□ -0.44
FDPS-204	ENST00000461507	CDH3	P22223	829 aa		12.31	□□□□□ -0.44
FDPS-204	ENST00000461507	CAV1	Q03135	178 aa		12.31	□□□□□ -0.44
FDPS-204	ENST00000461507	PLEKHS1	Q5SXH7	462 aa		12.31	□□□□□ -0.44
FDPS-204	ENST00000461507	DUPD1	Q68J44	220 aa		12.31	□□□□□ -0.44
FDPS-204	ENST00000461507	TRMT10B	Q6PF06	316 aa	Known RBP	12.31	□□□□□ -0.44
FDPS-204	ENST00000461507	AMIGO1	Q86WK6	493 aa		12.31	□□□□□ -0.44
FDPS-204	ENST00000461507	PPP1R3B	Q86XI6	285 aa		12.31	□□□□□ -0.44
FDPS-204	ENST00000461507	TBC1D21	Q8IYX1	336 aa		12.31	□□□□□ -0.44
FDPS-204	ENST00000461507	CEP112	Q8N8E3	955 aa		12.31	□□□□□ -0.44
FDPS-204	ENST00000461507	ELMO2	Q96JJ3	720 aa		12.31	□□□□□ -0.44
FDPS-204	ENST00000461507	LATS2	Q9NRM7	1088 aa		12.31	□□□□□ -0.44
FDPS-204	ENST00000461507	GRHL1	Q9NZI5	618 aa		12.31	□□□□□ -0.44
FDPS-204	ENST00000461507	POLG2	Q9UHN1	485 aa		12.31	□□□□□ -0.44
FDPS-204	ENST00000461507	TRMT6	Q9UJA5	497 aa	Known RBP	12.31	□□□□□ -0.44
FDPS-204	ENST00000461507	CROT	Q9UKG9	612 aa		12.31	□□□□□ -0.44
FDPS-204	ENST00000461507	SLC39A10	Q9ULF5	831 aa		12.31	□□□□□ -0.44
FDPS-204	ENST00000461507	BTRC	Q9Y297	605 aa		12.31	□□□□□ -0.44
FDPS-204	ENST00000461507	TEX264	Q9Y6I9	313 aa		12.31	□□□□□ -0.44
FDPS-204	ENST00000461507	NBAS	A2RRP1	2371 aa		12.31	□□□□□ -0.44
FDPS-204	ENST00000461507	HECTD1	Q9ULT8	2610 aa		12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	ISM1	B1AKI9	464 aa		12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	C21orf140	B9A014	251 aa		12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	PYCARD-AS1	I3L0S3	204 aa		12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	TIAF1	O95411	115 aa		12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	PRKAR1A	P10644	381 aa		12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	FOLR1	P15328	257 aa		12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	SHMT2	P34897	504 aa		12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	DLST	P36957	453 aa		12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	ACY1	Q03154	408 aa		12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	KCNC4	Q03721	635 aa		12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	TUBB3	Q13509	450 aa		12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	TSTA3	Q13630	321 aa	Predicted RBP	12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	TRADD	Q15628	312 aa		12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	FBXO38	Q6PIJ6	1188 aa		12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	RASGRP3	Q8IV61	690 aa		12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	DCUN1D3	Q8IWE4	304 aa		12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	RAB42	Q8N4Z0	105 aa		12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	C2orf73	Q8N5S3	287 aa	Predicted RBP	12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	NOA1	Q8NC60	698 aa	Known RBP	12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	C2CD4A	Q8NCU7	369 aa	Predicted RBP	12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	OR8K5	Q8NH50	307 aa		12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	OR5K2	Q8NHB8	316 aa		12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	C9orf43	Q8TAL5	461 aa	Predicted RBP	12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	FBXO25	Q8TCJ0	367 aa		12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	APOBEC4	Q8WW27	367 aa	Known RBP	12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	IFT81	Q8WYA0	676 aa		12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	GPR21	Q99679	349 aa		12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	NRTN	Q99748	197 aa		12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	MAP3K3	Q99759	626 aa		12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	WDR83	Q9BRX9	315 aa	Known RBP	12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	PDE7B	Q9NP56	450 aa		12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	TXNDC16	Q9P2K2	825 aa		12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	GALP	Q9UBC7	116 aa		12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	LNPEP	Q9UIQ6	1025 aa		12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	KCND3	Q9UK17	655 aa		12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	RARRES3	Q9UL19	164 aa		12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	ICK	Q9UPZ9	632 aa		12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	MRPS18B	Q9Y676	258 aa	Known RBP	12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	NFS1	Q9Y697	457 aa		12.3	□□□□□ -0.44
FDPS-204	ENST00000461507	PABPN1L	A6NDY0	278 aa	Known RBP	12.29	□□□□□ -0.44
FDPS-204	ENST00000461507	C2orf74	A8MZ97	194 aa		12.29	□□□□□ -0.44
FDPS-204	ENST00000461507	MATN2	O00339	956 aa		12.29	□□□□□ -0.44
FDPS-204	ENST00000461507	BTN3A1	O00481	513 aa		12.29	□□□□□ -0.44
FDPS-204	ENST00000461507	MAP3K7	O43318	606 aa		12.29	□□□□□ -0.44
FDPS-204	ENST00000461507	GPC4	O75487	556 aa		12.29	□□□□□ -0.44
FDPS-204	ENST00000461507	SYF2	O95926	243 aa	Known RBP	12.29	□□□□□ -0.44
FDPS-204	ENST00000461507	EBLN1	P0CF75	366 aa		12.29	□□□□□ -0.44
FDPS-204	ENST00000461507	ACADL	P28330	430 aa		12.29	□□□□□ -0.44
FDPS-204	ENST00000461507	ADAR	P55265	1226 aa	Known RBP	12.29	□□□□□ -0.44
FDPS-204	ENST00000461507	TUBB4B	P68371	445 aa		12.29	□□□□□ -0.44
FDPS-204	ENST00000461507	HSD11B2	P80365	405 aa		12.29	□□□□□ -0.44
FDPS-204	ENST00000461507	MGAT5	Q09328	741 aa		12.29	□□□□□ -0.44
FDPS-204	ENST00000461507	PDAP1	Q13442	181 aa	Known RBP	12.29	□□□□□ -0.44
FDPS-204	ENST00000461507	DNASE1L3	Q13609	305 aa		12.29	□□□□□ -0.44
FDPS-204	ENST00000461507	KLHL38	Q2WGJ6	581 aa		12.29	□□□□□ -0.44
FDPS-204	ENST00000461507	ACSBG2	Q5FVE4	666 aa		12.29	□□□□□ -0.44
FDPS-204	ENST00000461507	ATP1A1-AS1	Q5TC04	95 aa		12.29	□□□□□ -0.44
FDPS-204	ENST00000461507	STEAP4	Q687X5	459 aa		12.29	□□□□□ -0.44
FDPS-204	ENST00000461507	PWWP2B	Q6NUJ5	590 aa		12.29	□□□□□ -0.44
FDPS-204	ENST00000461507	UGT3A1	Q6NUS8	523 aa		12.29	□□□□□ -0.44
FDPS-204	ENST00000461507	ZNF549	Q6P9A3	640 aa		12.29	□□□□□ -0.44
FDPS-204	ENST00000461507	UNC5D	Q6UXZ4	953 aa		12.29	□□□□□ -0.44
FDPS-204	ENST00000461507	ZNF517	Q6ZMY9	492 aa	Predicted RBP	12.29	□□□□□ -0.44
FDPS-204	ENST00000461507	CTAGE3P	Q8IX95	158 aa		12.29	□□□□□ -0.44
FDPS-204	ENST00000461507	CPNE9	Q8IYJ1	553 aa		12.29	□□□□□ -0.44
FDPS-204	ENST00000461507	MMGT1	Q8N4V1	131 aa		12.29	□□□□□ -0.44
FDPS-204	ENST00000461507	CT55	Q8WUE5	264 aa		12.29	□□□□□ -0.44
FDPS-204	ENST00000461507	CDKL2	Q92772	493 aa		12.29	□□□□□ -0.44
FDPS-204	ENST00000461507	KCNJ9	Q92806	393 aa		12.29	□□□□□ -0.44
FDPS-204	ENST00000461507	IL17F	Q96PD4	163 aa		12.29	□□□□□ -0.44
FDPS-204	ENST00000461507	AARSD1	Q9BTE6	412 aa	Known RBP	12.29	□□□□□ -0.44
FDPS-204	ENST00000461507	TRIM4	Q9C037	500 aa		12.29	□□□□□ -0.44
FDPS-204	ENST00000461507	KLHL25	Q9H0H3	589 aa		12.29	□□□□□ -0.44
FDPS-204	ENST00000461507	LHX9	Q9NQ69	397 aa		12.29	□□□□□ -0.44

Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms