RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 PTGR1Q14914 329 aa2.83□□□□□ -1.96
HPS3-203ENST00000460822 PDK1Q15118 436 aa2.83□□□□□ -1.96
HPS3-203ENST00000460822 ANKDD1AQ495B1 522 aa2.83□□□□□ -1.96
HPS3-203ENST00000460822 IFI44LQ53G44 452 aa2.83□□□□□ -1.96
HPS3-203ENST00000460822 MANEAQ5SRI9 462 aa2.83□□□□□ -1.96
HPS3-203ENST00000460822 OTUD1Q5VV17 481 aaPredicted RBP2.83□□□□□ -1.96
HPS3-203ENST00000460822 PODNL1Q6PEZ8 512 aa2.83□□□□□ -1.96
HPS3-203ENST00000460822 CASC1Q6TDU7 716 aa2.83□□□□□ -1.96
HPS3-203ENST00000460822 PIGWQ7Z7B1 504 aa2.83□□□□□ -1.96
HPS3-203ENST00000460822 FOXP4Q8IVH2 680 aaPredicted RBP2.83□□□□□ -1.96
HPS3-203ENST00000460822 MAP7D3Q8IWC1 876 aa2.83□□□□□ -1.96
HPS3-203ENST00000460822 C4orf19Q8IY42 314 aa2.83□□□□□ -1.96
HPS3-203ENST00000460822 TBC1D21Q8IYX1 336 aa2.83□□□□□ -1.96
HPS3-203ENST00000460822 NEK11Q8NG66 645 aa2.83□□□□□ -1.96
HPS3-203ENST00000460822 OR52I2Q8NH67 350 aa2.83□□□□□ -1.96
HPS3-203ENST00000460822 B4GALNT2Q8NHY0 566 aa2.83□□□□□ -1.96
HPS3-203ENST00000460822 PRCCQ92733 491 aaPredicted RBP2.83□□□□□ -1.96
HPS3-203ENST00000460822 SEMA4DQ92854 862 aa2.83□□□□□ -1.96
HPS3-203ENST00000460822 DAZLQ92904 295 aaKnown RBP2.83□□□□□ -1.96
HPS3-203ENST00000460822 TRIM44Q96DX7 344 aaPredicted RBP2.83□□□□□ -1.96
HPS3-203ENST00000460822 C5orf30Q96GV9 206 aa2.83□□□□□ -1.96
HPS3-203ENST00000460822 RBM18Q96H35 190 aaKnown RBP2.83□□□□□ -1.96
HPS3-203ENST00000460822 URB1-AS1Q96HZ7 61 aa2.83□□□□□ -1.96
HPS3-203ENST00000460822 PKNOX2Q96KN3 472 aa2.83□□□□□ -1.96
HPS3-203ENST00000460822 CSF3RQ99062 836 aa2.83□□□□□ -1.96
HPS3-203ENST00000460822 SRD5A3Q9H8P0 318 aa2.83□□□□□ -1.96
HPS3-203ENST00000460822 RNPEPL1Q9HAU8 725 aa2.83□□□□□ -1.96
HPS3-203ENST00000460822 PLAC1Q9HBJ0 212 aa2.83□□□□□ -1.96
HPS3-203ENST00000460822 DNAJC4Q9NNZ3 241 aa2.83□□□□□ -1.96
HPS3-203ENST00000460822 C1RLQ9NZP8 487 aa2.83□□□□□ -1.96
HPS3-203ENST00000460822 FBXL5Q9UKA1 691 aa2.83□□□□□ -1.96
HPS3-203ENST00000460822 RRP15Q9Y3B9 282 aaKnown RBP2.83□□□□□ -1.96
HPS3-203ENST00000460822 SNX9Q9Y5X1 595 aa2.83□□□□□ -1.96
HPS3-203ENST00000460822 PTPRCP08575 1304 aa2.83□□□□□ -1.96
HPS3-203ENST00000460822 NCOA1Q15788 1441 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 FYCO1Q9BQS8 1478 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 A0A1W2PPW3 197 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 HYKKA2RU49 373 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 GOLGA6L9A6NEM1 432 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 NEMP2A6NFY4 417 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 SDR42E2A6NKP2 422 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 CRCPO75575 148 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 BMP10O95393 424 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 PLGP00747 810 aaPredicted RBP2.82□□□□□ -1.96
HPS3-203ENST00000460822 CSN3P07498 182 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 HSPA5P11021 654 aaKnown RBP2.82□□□□□ -1.96
HPS3-203ENST00000460822 FRKP42685 505 aaPredicted RBP2.82□□□□□ -1.96
HPS3-203ENST00000460822 ATXN3P54252 364 aaPredicted RBP2.82□□□□□ -1.96
HPS3-203ENST00000460822 MTCP1P56278 107 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 SLC26A5P58743 744 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 DLK1P80370 383 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 PDE1BQ01064 536 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 PRKAA1Q13131 559 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 SGCBQ16585 318 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 FAM174BQ3ZCQ3 159 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 ZNF260Q3ZCT1 412 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 FUT11Q495W5 492 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 AARDQ4LEZ3 155 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 LACTB2Q53H82 288 aaPredicted RBP2.82□□□□□ -1.96
HPS3-203ENST00000460822 ZNF789Q5FWF6 425 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 FSCBQ5H9T9 825 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 GRTP1Q5TC63 336 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 CYB5D1Q6P9G0 228 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 ZCCHC12Q6PEW1 402 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 ISLR2Q6UXK2 745 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 RAD9BQ6WBX8 426 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 ZNF517Q6ZMY9 492 aaPredicted RBP2.82□□□□□ -1.96
HPS3-203ENST00000460822 Q75L30 129 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 DGLUCYQ7Z3D6 616 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 NRARPQ7Z6K4 114 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 ZNF34Q8IZ26 560 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 GBGT1Q8N5D6 347 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 CNNM3Q8NE01 707 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 C16orf52Q8NHV5 167 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 NCOA7Q8NI08 942 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 SSMEM1Q8WWF3 244 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 AP2M1Q96CW1 435 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 FAM111AQ96PZ2 611 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 TRMOQ9BU70 441 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 LSG1Q9H089 658 aaKnown RBP2.82□□□□□ -1.96
HPS3-203ENST00000460822 AKIRIN1Q9H9L7 192 aaPredicted RBP2.82□□□□□ -1.96
HPS3-203ENST00000460822 RAB9BQ9NP90 201 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 ZBTB40Q9NUA8 1239 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 DNAJC11Q9NVH1 559 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 TMEM161AQ9NX61 479 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 MIOSQ9NXC5 875 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 DCAF16Q9NXF7 216 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 KLHL9Q9P2J3 617 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 IL36RNQ9UBH0 155 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 GMEB2Q9UKD1 530 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 DUSP12Q9UNI6 340 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 NME7Q9Y5B8 376 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 TEX264Q9Y6I9 313 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 FGD6Q6ZV73 1430 aa2.82□□□□□ -1.96
HPS3-203ENST00000460822 AQRO60306 1485 aaKnown RBP eCLIP2.82□□□□□ -1.96
HPS3-203ENST00000460822 A0A1B0GVT2 93 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 A0A1W2PPK0 400 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 ELOVL7A1L3X0 281 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 MAGEA13PA6NCF6 341 aa2.81□□□□□ -1.96
HPS3-203ENST00000460822 C5orf51A6NDU8 294 aa2.81□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms