RNA–Protein interactions for RNA: ENST00000460158.1

VPS8-215, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 366 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-215ENST00000460158 IL16Q14005 1332 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 CNTNAP2Q9UHC6 1331 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 SAA2-SAA4A0A096LPE2 208 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 PLSCR5A0PG75 271 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 OR2A25A4D2G3 310 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 ZSCAN5CA6NGD5 496 aaPredicted RBP3.24□□□□□ -1.89
VPS8-215ENST00000460158 LILRA5A6NI73 299 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 GLOD5A6NK44 160 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 L7N2F9 121 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 O00370 1275 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 MITFO75030 526 aaPredicted RBP3.24□□□□□ -1.89
VPS8-215ENST00000460158 PSMD10O75832 226 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 ALPPP05187 535 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 FYNP06241 537 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 TPM3P06753 285 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 SUPT20HL2P0C7V6 817 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 CCDC192P0DO97 292 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 ALPPL2P10696 532 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 FGF3P11487 239 aaPredicted RBP3.24□□□□□ -1.89
VPS8-215ENST00000460158 HLA-DOBP13765 273 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 MMP9P14780 707 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 CSF2RAP15509 400 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 HOXC8P31273 242 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 USP8P40818 1118 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 NPY4RP50391 375 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 CAPZA1P52907 286 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 CASP9P55211 416 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 PPP2R2BQ00005 443 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 PRKCEQ02156 737 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 RELQ04864 619 aaPredicted RBP3.24□□□□□ -1.89
VPS8-215ENST00000460158 EEF1A2Q05639 463 aaKnown RBP3.24□□□□□ -1.89
VPS8-215ENST00000460158 DLG2Q15700 870 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 MEP1BQ16820 701 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 SYT16Q17RD7 645 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 C15orf59Q2T9L4 293 aaPredicted RBP3.24□□□□□ -1.89
VPS8-215ENST00000460158 TWISTNBQ3B726 338 aaPredicted RBP3.24□□□□□ -1.89
VPS8-215ENST00000460158 ANKRD20A4Q4UJ75 823 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 ANKRD20A8PQ5CZ79 823 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 ANKRD20A2Q5SQ80 823 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 ANKRD20A1Q5TYW2 823 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 ANKRD20A3Q5VUR7 823 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 CST9LP1Q5W188 147 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 CES4AQ5XG92 561 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 CENPPQ6IPU0 288 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 KIAA1161Q6NSJ0 714 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 TMEM270Q6UE05 265 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 SUSD1Q6UWL2 747 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 RAD9BQ6WBX8 426 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 ADCK2Q7Z695 626 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 AACSQ86V21 672 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 TMPRSS12Q86WS5 348 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 LINC00346Q8IVM7 164 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 ARID3BQ8IVW6 561 aaPredicted RBP3.24□□□□□ -1.89
VPS8-215ENST00000460158 RNF113BQ8IZP6 322 aaKnown RBP3.24□□□□□ -1.89
VPS8-215ENST00000460158 MYOCDQ8IZQ8 938 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 PDCL2Q8N4E4 241 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 IL17RCQ8NAC3 791 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 BBOF1Q8ND07 529 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 BBS10Q8TAM1 723 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 SLC38A5Q8WUX1 472 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 SLC5A11Q8WWX8 675 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 RAPGEF5Q92565 580 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 THRSPQ92748 146 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 PIGTQ969N2 578 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 LRRC59Q96AG4 307 aaKnown RBP3.24□□□□□ -1.89
VPS8-215ENST00000460158 EPSTI1Q96J88 318 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 CNOT6LQ96LI5 555 aaKnown RBP3.24□□□□□ -1.89
VPS8-215ENST00000460158 TCEANC2Q96MN5 208 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 GDAP1L1Q96MZ0 367 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 GAL3ST4Q96RP7 486 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 GFI1Q99684 422 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 SEMA3CQ99985 751 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 MTMR12Q9C0I1 747 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 TMEM39BQ9GZU3 492 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 DNAJC18Q9H819 358 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 VCPKMTQ9H867 229 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 DDX31Q9H8H2 851 aaKnown RBP3.24□□□□□ -1.89
VPS8-215ENST00000460158 UBTD1Q9HAC8 227 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 WSB2Q9NYS7 404 aaPredicted RBP3.24□□□□□ -1.89
VPS8-215ENST00000460158 TMOD2Q9NZR1 351 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 ARMCX3Q9UH62 379 aaPredicted RBP3.24□□□□□ -1.89
VPS8-215ENST00000460158 TUBE1Q9UJT0 475 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 ZNF580Q9UK33 172 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 APPL1Q9UKG1 709 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 RPH3AQ9Y2J0 694 aaPredicted RBP3.24□□□□□ -1.89
VPS8-215ENST00000460158 OR2W1Q9Y3N9 320 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 PCDHGA1Q9Y5H4 931 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 CLCA3PQ9Y6N3 262 aa3.24□□□□□ -1.89
VPS8-215ENST00000460158 CGNL1Q0VF96 1302 aa3.23□□□□□ -1.89
VPS8-215ENST00000460158 IGHV4OR15-8A0A075B7B6 117 aa3.23□□□□□ -1.89
VPS8-215ENST00000460158 A0A1W2PP11 408 aa3.23□□□□□ -1.89
VPS8-215ENST00000460158 TRBC2A0A5B9 178 aa3.23□□□□□ -1.89
VPS8-215ENST00000460158 EME2A4GXA9 379 aaPredicted RBP3.23□□□□□ -1.89
VPS8-215ENST00000460158 TMEM8BA6NDV4 472 aa3.23□□□□□ -1.89
VPS8-215ENST00000460158 LRRC72A6NJI9 287 aa3.23□□□□□ -1.89
VPS8-215ENST00000460158 OR6C76A6NM76 312 aa3.23□□□□□ -1.89
VPS8-215ENST00000460158 FAM86B1E9PN63 330 aa3.23□□□□□ -1.89
VPS8-215ENST00000460158 ACOT8O14734 319 aa3.23□□□□□ -1.89
VPS8-215ENST00000460158 PAPSS1O43252 624 aaPredicted RBP3.23□□□□□ -1.89
VPS8-215ENST00000460158 NMT2O60551 498 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms