RNA–Protein interactions for RNA: ENST00000459902.1

CKAP2-204, Transcript of cytoskeleton associated protein 2, humanhuman

TSL 2

Gene CKAP2, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-204ENST00000459902 RBPJQ06330 500 aa5.61□□□□□ -1.51
CKAP2-204ENST00000459902 ACSM1Q08AH1 577 aa5.61□□□□□ -1.51
CKAP2-204ENST00000459902 GPR17Q13304 367 aa5.61□□□□□ -1.51
CKAP2-204ENST00000459902 CYP4A22Q5TCH4 519 aa5.61□□□□□ -1.51
CKAP2-204ENST00000459902 DET1Q7L5Y6 550 aa5.61□□□□□ -1.51
CKAP2-204ENST00000459902 SLC16A9Q7RTY1 509 aa5.61□□□□□ -1.51
CKAP2-204ENST00000459902 PHLDA1Q8WV24 401 aaPredicted RBP5.61□□□□□ -1.51
CKAP2-204ENST00000459902 TMEM190Q8WZ59 177 aa5.61□□□□□ -1.51
CKAP2-204ENST00000459902 VPS33AQ96AX1 596 aa5.61□□□□□ -1.51
CKAP2-204ENST00000459902 CNDP2Q96KP4 475 aaKnown RBP5.61□□□□□ -1.51
CKAP2-204ENST00000459902 FEVQ99581 238 aa5.61□□□□□ -1.51
CKAP2-204ENST00000459902 FSD1Q9BTV5 496 aa5.61□□□□□ -1.51
CKAP2-204ENST00000459902 VPS33BQ9H267 617 aa5.61□□□□□ -1.51
CKAP2-204ENST00000459902 STK36Q9NRP7 1315 aa5.61□□□□□ -1.51
CKAP2-204ENST00000459902 INTS9Q9NV88 658 aaKnown RBP5.61□□□□□ -1.51
CKAP2-204ENST00000459902 SPHK1Q9NYA1 384 aa5.61□□□□□ -1.51
CKAP2-204ENST00000459902 FLRT3Q9NZU0 649 aa5.61□□□□□ -1.51
CKAP2-204ENST00000459902 ZNF197O14709 1029 aa5.6□□□□□ -1.51
CKAP2-204ENST00000459902 CLPTM1O96005 669 aa5.6□□□□□ -1.51
CKAP2-204ENST00000459902 EDN1P05305 212 aa5.6□□□□□ -1.51
CKAP2-204ENST00000459902 ATP5BP06576 529 aaKnown RBP5.6□□□□□ -1.51
CKAP2-204ENST00000459902 HAPLN1P10915 354 aaPredicted RBP5.6□□□□□ -1.51
CKAP2-204ENST00000459902 GNB3P16520 340 aa5.6□□□□□ -1.51
CKAP2-204ENST00000459902 LHX1P48742 406 aa5.6□□□□□ -1.51
CKAP2-204ENST00000459902 TAF13Q15543 124 aa5.6□□□□□ -1.51
CKAP2-204ENST00000459902 UGP2Q16851 508 aa5.6□□□□□ -1.51
CKAP2-204ENST00000459902 UGT3A2Q3SY77 523 aa5.6□□□□□ -1.51
CKAP2-204ENST00000459902 XKR3Q5GH77 459 aa5.6□□□□□ -1.51
CKAP2-204ENST00000459902 KRT39Q6A163 491 aa5.6□□□□□ -1.51
CKAP2-204ENST00000459902 RTN4RL2Q86UN3 420 aa5.6□□□□□ -1.51
CKAP2-204ENST00000459902 MAML2Q8IZL2 1156 aaPredicted RBP5.6□□□□□ -1.51
CKAP2-204ENST00000459902 EID3Q8N140 333 aa5.6□□□□□ -1.51
CKAP2-204ENST00000459902 KBTBD8Q8NFY9 601 aa5.6□□□□□ -1.51
CKAP2-204ENST00000459902 MUS81Q96NY9 551 aa5.6□□□□□ -1.51
CKAP2-204ENST00000459902 LITAFQ99732 161 aa5.6□□□□□ -1.51
CKAP2-204ENST00000459902 CPNE1Q99829 537 aa5.6□□□□□ -1.51
CKAP2-204ENST00000459902 SCRT2Q9NQ03 307 aa5.6□□□□□ -1.51
CKAP2-204ENST00000459902 FGF21Q9NSA1 209 aa5.6□□□□□ -1.51
CKAP2-204ENST00000459902 CPSF3Q9UKF6 684 aaKnown RBP5.6□□□□□ -1.51
CKAP2-204ENST00000459902 TRIM17Q9Y577 477 aa5.6□□□□□ -1.51
CKAP2-204ENST00000459902 HHLA1C9JL84 531 aa5.59□□□□□ -1.51
CKAP2-204ENST00000459902 DKC1O60832 514 aaKnown RBP eCLIP5.59□□□□□ -1.51
CKAP2-204ENST00000459902 CD22P20273 847 aa5.59□□□□□ -1.51
CKAP2-204ENST00000459902 CA6P23280 308 aa5.59□□□□□ -1.51
CKAP2-204ENST00000459902 AZGP1P25311 298 aaKnown RBP5.59□□□□□ -1.51
CKAP2-204ENST00000459902 PTGER4P35408 488 aa5.59□□□□□ -1.51
CKAP2-204ENST00000459902 ASCL1P50553 236 aa5.59□□□□□ -1.51
CKAP2-204ENST00000459902 NR0B1P51843 470 aaKnown RBP5.59□□□□□ -1.51
CKAP2-204ENST00000459902 RAD23AP54725 363 aa5.59□□□□□ -1.51
CKAP2-204ENST00000459902 ODF4Q2M2E3 257 aa5.59□□□□□ -1.51
CKAP2-204ENST00000459902 TMEM30BQ3MIR4 351 aa5.59□□□□□ -1.51
CKAP2-204ENST00000459902 MCMDC2Q4G0Z9 681 aa5.59□□□□□ -1.51
CKAP2-204ENST00000459902 C1orf141Q5JVX7 400 aa5.59□□□□□ -1.51
CKAP2-204ENST00000459902 PIGZQ86VD9 579 aa5.59□□□□□ -1.51
CKAP2-204ENST00000459902 CDK20Q8IZL9 346 aa5.59□□□□□ -1.51
CKAP2-204ENST00000459902 MRPS27Q92552 414 aaKnown RBP5.59□□□□□ -1.51
CKAP2-204ENST00000459902 MOB3AQ96BX8 217 aa5.59□□□□□ -1.51
CKAP2-204ENST00000459902 THOC1Q96FV9 657 aaKnown RBP5.59□□□□□ -1.51
CKAP2-204ENST00000459902 LRRC3BQ96PB8 259 aa5.59□□□□□ -1.51
CKAP2-204ENST00000459902 BAG1Q99933 345 aaPredicted RBP5.59□□□□□ -1.51
CKAP2-204ENST00000459902 URM1Q9BTM9 101 aaKnown RBP5.59□□□□□ -1.51
CKAP2-204ENST00000459902 MIS12Q9H081 205 aa5.59□□□□□ -1.51
CKAP2-204ENST00000459902 CFDP1Q9UEE9 299 aaPredicted RBP5.59□□□□□ -1.51
CKAP2-204ENST00000459902 TMED3Q9Y3Q3 217 aa5.59□□□□□ -1.51
CKAP2-204ENST00000459902 DISP3Q9P2K9 1392 aa5.58□□□□□ -1.52
CKAP2-204ENST00000459902 GIMAP1-GIMAP5A0A087WTJ2 511 aa5.58□□□□□ -1.52
CKAP2-204ENST00000459902 ACSL3O95573 720 aa5.58□□□□□ -1.52
CKAP2-204ENST00000459902 EML2O95834 649 aa5.58□□□□□ -1.52
CKAP2-204ENST00000459902 IGHV4-31P0DP07 118 aa5.58□□□□□ -1.52
CKAP2-204ENST00000459902 WNT5AP41221 380 aa5.58□□□□□ -1.52
CKAP2-204ENST00000459902 KCNJ10P78508 379 aa5.58□□□□□ -1.52
CKAP2-204ENST00000459902 CDR2Q01850 454 aa5.58□□□□□ -1.52
CKAP2-204ENST00000459902 TAF10Q12962 218 aa5.58□□□□□ -1.52
CKAP2-204ENST00000459902 CAMK2DQ13557 499 aa5.58□□□□□ -1.52
CKAP2-204ENST00000459902 ITGA7Q13683 1181 aa5.58□□□□□ -1.52
CKAP2-204ENST00000459902 VEZF1Q14119 521 aa5.58□□□□□ -1.52
CKAP2-204ENST00000459902 GTDC1Q4AE62 458 aa5.58□□□□□ -1.52
CKAP2-204ENST00000459902 KRBOX4Q5JUW0 171 aa5.58□□□□□ -1.52
CKAP2-204ENST00000459902 ARHGEF16Q5VV41 709 aa5.58□□□□□ -1.52
CKAP2-204ENST00000459902 ARHGAP11AQ6P4F7 1023 aa5.58□□□□□ -1.52
CKAP2-204ENST00000459902 CHST3Q7LGC8 479 aa5.58□□□□□ -1.52
CKAP2-204ENST00000459902 BMPERQ8N8U9 685 aa5.58□□□□□ -1.52
CKAP2-204ENST00000459902 OR52N5Q8NH56 324 aa5.58□□□□□ -1.52
CKAP2-204ENST00000459902 HPSE2Q8WWQ2 592 aa5.58□□□□□ -1.52
CKAP2-204ENST00000459902 ROBO4Q8WZ75 1007 aa5.58□□□□□ -1.52
CKAP2-204ENST00000459902 ZNF653Q96CK0 615 aa5.58□□□□□ -1.52
CKAP2-204ENST00000459902 GIMAP5Q96F15 307 aa5.58□□□□□ -1.52
CKAP2-204ENST00000459902 RADILQ96JH8 1075 aa5.58□□□□□ -1.52
CKAP2-204ENST00000459902 FAM20AQ96MK3 541 aa5.58□□□□□ -1.52
CKAP2-204ENST00000459902 ZNF71Q9NQZ8 489 aaPredicted RBP5.58□□□□□ -1.52
CKAP2-204ENST00000459902 ENO4A6NNW6 628 aa5.57□□□□□ -1.52
CKAP2-204ENST00000459902 TRMUO75648 421 aaKnown RBP5.57□□□□□ -1.52
CKAP2-204ENST00000459902 CCDC175P0C221 793 aa5.57□□□□□ -1.52
CKAP2-204ENST00000459902 CEACAM1P13688 526 aa5.57□□□□□ -1.52
CKAP2-204ENST00000459902 ERCC2P18074 760 aa5.57□□□□□ -1.52
CKAP2-204ENST00000459902 NKX2-1P43699 371 aaPredicted RBP5.57□□□□□ -1.52
CKAP2-204ENST00000459902 MAZP56270 477 aaKnown RBP5.57□□□□□ -1.52
CKAP2-204ENST00000459902 CUL3Q13618 768 aa5.57□□□□□ -1.52
CKAP2-204ENST00000459902 COG2Q14746 738 aa5.57□□□□□ -1.52
CKAP2-204ENST00000459902 TNIP1Q15025 636 aa5.57□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms