RNA–Protein interactions for RNA: ENST00000459788.1

HDLBP-228, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-228ENST00000459788 SLC7A5P2Q9GIP4 190 aa9.65□□□□□ -0.86
HDLBP-228ENST00000459788 XKR8Q9H6D3 395 aa9.65□□□□□ -0.86
HDLBP-228ENST00000459788 IL1RAPL1Q9NZN1 696 aa9.65□□□□□ -0.86
HDLBP-228ENST00000459788 SPATA7Q9P0W8 599 aa9.65□□□□□ -0.86
HDLBP-228ENST00000459788 SAMD15Q9P1V8 674 aa9.65□□□□□ -0.86
HDLBP-228ENST00000459788 MARCH4Q9P2E8 410 aaPredicted RBP9.65□□□□□ -0.86
HDLBP-228ENST00000459788 SNX7Q9UNH6 387 aa9.65□□□□□ -0.86
HDLBP-228ENST00000459788 TDRKHQ9Y2W6 561 aaKnown RBP9.65□□□□□ -0.86
HDLBP-228ENST00000459788 GOLGA6L10A0A0M3HER8 536 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 SDR42E2A6NKP2 422 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 ZNF839A8K0R7 811 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 ISM1B1AKI9 464 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 PGRMC1O00264 195 aaKnown RBP9.64□□□□□ -0.87
HDLBP-228ENST00000459788 EIF3FO00303 357 aaPredicted RBP9.64□□□□□ -0.87
HDLBP-228ENST00000459788 ZSCAN9O15535 394 aaPredicted RBP9.64□□□□□ -0.87
HDLBP-228ENST00000459788 PRICKLE3O43900 615 aaPredicted RBP9.64□□□□□ -0.87
HDLBP-228ENST00000459788 SRPX2O60687 465 aaPredicted RBP9.64□□□□□ -0.87
HDLBP-228ENST00000459788 VAPBO95292 243 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 MATN4O95460 622 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 KRT14P02533 472 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 ALBP02768 609 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 FURINP09958 794 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 MGAT1P26572 445 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 VARSP26640 1264 aaKnown RBP9.64□□□□□ -0.87
HDLBP-228ENST00000459788 ARNTP27540 789 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 NMBRP28336 390 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 COILP38432 576 aaPredicted RBP9.64□□□□□ -0.87
HDLBP-228ENST00000459788 MAGEA3P43357 314 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 KCNJ1P48048 391 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 DCDP81605 110 aaKnown RBP9.64□□□□□ -0.87
HDLBP-228ENST00000459788 RELAQ04206 551 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 GPS1Q13098 491 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 GRB7Q14451 532 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 SSPNQ14714 243 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 ARHGAP19Q14CB8 494 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 BRD3Q15059 726 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 ATP1A1-AS1Q5TC04 95 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 FAM199XQ6PEV8 388 aaPredicted RBP9.64□□□□□ -0.87
HDLBP-228ENST00000459788 FBXO38Q6PIJ6 1188 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 CCDC137Q6PK04 289 aaKnown RBP9.64□□□□□ -0.87
HDLBP-228ENST00000459788 PRUNE1Q86TP1 453 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 TMEM135Q86UB9 458 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 ENDOVQ8N8Q3 282 aaKnown RBP9.64□□□□□ -0.87
HDLBP-228ENST00000459788 LMNTD1Q8N9Z9 388 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 FBXO15Q8NCQ5 510 aaPredicted RBP9.64□□□□□ -0.87
HDLBP-228ENST00000459788 CALML6Q8TD86 181 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 MAGOHBQ96A72 148 aaKnown RBP9.64□□□□□ -0.87
HDLBP-228ENST00000459788 FKBP10Q96AY3 582 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 ZNF285Q96NJ3 590 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 BIRC8Q96P09 236 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 GBP5Q96PP8 586 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 NDC1Q9BTX1 674 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 AKIRIN1Q9H9L7 192 aaPredicted RBP9.64□□□□□ -0.87
HDLBP-228ENST00000459788 FAM114A2Q9NRY5 505 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 SYBUQ9NX95 663 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 SPHK1Q9NYA1 384 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 ANKMY1Q9P2S6 941 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 TLK1Q9UKI8 766 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 SLC39A10Q9ULF5 831 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 DOPEY2Q9Y3R5 2298 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 SPTBN1Q01082 2364 aaKnown RBP9.64□□□□□ -0.87
HDLBP-228ENST00000459788 ESPL1Q14674 2120 aa9.64□□□□□ -0.87
HDLBP-228ENST00000459788 FITM1A5D6W6 292 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 SMAPO00193 183 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 USP1O94782 785 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 C1orf105O95561 183 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 ERGP11308 486 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 ENO3P13929 434 aaPredicted RBP9.63□□□□□ -0.87
HDLBP-228ENST00000459788 PVRP15151 417 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 PEBP1P30086 187 aaKnown RBP9.63□□□□□ -0.87
HDLBP-228ENST00000459788 CXCR5P32302 372 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 CD97P48960 835 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 EMP3P54852 163 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 EIF3BP55884 814 aaKnown RBP9.63□□□□□ -0.87
HDLBP-228ENST00000459788 SOX8P57073 446 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 TLE1Q04724 770 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 IL10RAQ13651 578 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 ZIC1Q15915 447 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 CYP2A13Q16696 494 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 FAM214AQ32MH5 1076 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 TTLL9Q3SXZ7 439 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 CTSL3PQ5NE16 218 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 LRRC8EQ6NSJ5 796 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 NEPROQ6NW34 567 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 MRPL14Q6P1L8 145 aaKnown RBP9.63□□□□□ -0.87
HDLBP-228ENST00000459788 ASB18Q6ZVZ8 466 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 PCGF5Q86SE9 256 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 CAND1Q86VP6 1230 aaKnown RBP9.63□□□□□ -0.87
HDLBP-228ENST00000459788 CILP2Q8IUL8 1156 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 VRK3Q8IV63 474 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 TEX19Q8NA77 164 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 LINC01555Q8NAE3 123 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 LKAAEAR1Q8TD35 194 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 SLCO2A1Q92959 643 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 MFSD3Q96ES6 412 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 VPS50Q96JG6 964 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 NAT9Q9BTE0 207 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 ING2Q9H160 280 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 SLC26A1Q9H2B4 701 aa9.63□□□□□ -0.87
HDLBP-228ENST00000459788 WDR54Q9H977 334 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms