RNA–Protein interactions for RNA: ENST00000457942.1

CHCHD3-204, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 4

Gene CHCHD3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-204ENST00000457942 SLC9A5Q14940 896 aa15.18■□□□□ 0.02
CHCHD3-204ENST00000457942 KIR2DS3Q14952 304 aa15.18■□□□□ 0.02
CHCHD3-204ENST00000457942 INPP5JQ15735 1006 aaPredicted RBP15.18■□□□□ 0.02
CHCHD3-204ENST00000457942 ZIC1Q15915 447 aa15.18■□□□□ 0.02
CHCHD3-204ENST00000457942 CCNG2Q16589 344 aa15.18■□□□□ 0.02
CHCHD3-204ENST00000457942 SLC5A12Q1EHB4 618 aa15.18■□□□□ 0.02
CHCHD3-204ENST00000457942 DCUN1D3Q8IWE4 304 aa15.18■□□□□ 0.02
CHCHD3-204ENST00000457942 SLC22A15Q8IZD6 547 aa15.18■□□□□ 0.02
CHCHD3-204ENST00000457942 KRT222Q8N1A0 295 aa15.18■□□□□ 0.02
CHCHD3-204ENST00000457942 C2orf73Q8N5S3 287 aaPredicted RBP15.18■□□□□ 0.02
CHCHD3-204ENST00000457942 ZNF655Q8N720 491 aaPredicted RBP15.18■□□□□ 0.02
CHCHD3-204ENST00000457942 ADAMTS17Q8TE56 1095 aa15.18■□□□□ 0.02
CHCHD3-204ENST00000457942 MAIP1Q8WWC4 291 aa15.18■□□□□ 0.02
CHCHD3-204ENST00000457942 PEX13Q92968 403 aa15.18■□□□□ 0.02
CHCHD3-204ENST00000457942 CARD6Q9BX69 1037 aa15.18■□□□□ 0.02
CHCHD3-204ENST00000457942 AP1M1Q9BXS5 423 aa15.18■□□□□ 0.02
CHCHD3-204ENST00000457942 SPRTNQ9H040 489 aaPredicted RBP15.18■□□□□ 0.02
CHCHD3-204ENST00000457942 CHRAC1Q9NRG0 131 aa15.18■□□□□ 0.02
CHCHD3-204ENST00000457942 BFARQ9NZS9 450 aa15.18■□□□□ 0.02
CHCHD3-204ENST00000457942 NDOR1Q9UHB4 597 aa15.18■□□□□ 0.02
CHCHD3-204ENST00000457942 GNPTGQ9UJJ9 305 aa15.18■□□□□ 0.02
CHCHD3-204ENST00000457942 SLC39A10Q9ULF5 831 aa15.18■□□□□ 0.02
CHCHD3-204ENST00000457942 PCDHGA9Q9Y5G4 932 aaKnown RBP15.18■□□□□ 0.02
CHCHD3-204ENST00000457942 FER1L5A0AVI2 2057 aa15.18■□□□□ 0.02
CHCHD3-204ENST00000457942 DOPEY1Q5JWR5 2465 aa15.18■□□□□ 0.02
CHCHD3-204ENST00000457942 A6NL46 340 aa15.17■□□□□ 0.02
CHCHD3-204ENST00000457942 PRMT5O14744 637 aaPredicted RBP15.17■□□□□ 0.02
CHCHD3-204ENST00000457942 ZNF185O15231 689 aa15.17■□□□□ 0.02
CHCHD3-204ENST00000457942 CD3EAPO15446 510 aaKnown RBP15.17■□□□□ 0.02
CHCHD3-204ENST00000457942 NDUFS3O75489 264 aa15.17■□□□□ 0.02
CHCHD3-204ENST00000457942 FGGP02679 453 aa15.17■□□□□ 0.02
CHCHD3-204ENST00000457942 CBSLP0DN79 551 aa15.17■□□□□ 0.02
CHCHD3-204ENST00000457942 PEBP1P30086 187 aaKnown RBP15.17■□□□□ 0.02
CHCHD3-204ENST00000457942 CBSP35520 551 aa15.17■□□□□ 0.02
CHCHD3-204ENST00000457942 FOLR3P41439 243 aa15.17■□□□□ 0.02
CHCHD3-204ENST00000457942 ATP1A4Q13733 1029 aa15.17■□□□□ 0.02
CHCHD3-204ENST00000457942 KYNUQ16719 465 aa15.17■□□□□ 0.02
CHCHD3-204ENST00000457942 TTC23LQ6PF05 361 aa15.17■□□□□ 0.02
CHCHD3-204ENST00000457942 VRK3Q8IV63 474 aa15.17■□□□□ 0.02
CHCHD3-204ENST00000457942 FAM20CQ8IXL6 584 aa15.17■□□□□ 0.02
CHCHD3-204ENST00000457942 SGSM3Q96HU1 749 aa15.17■□□□□ 0.02
CHCHD3-204ENST00000457942 PANX3Q96QZ0 392 aa15.17■□□□□ 0.02
CHCHD3-204ENST00000457942 NDC1Q9BTX1 674 aa15.17■□□□□ 0.02
CHCHD3-204ENST00000457942 DHRS4Q9BTZ2 278 aa15.17■□□□□ 0.02
CHCHD3-204ENST00000457942 IL22Q9GZX6 179 aa15.17■□□□□ 0.02
CHCHD3-204ENST00000457942 EIF2B3Q9NR50 452 aaKnown RBP15.17■□□□□ 0.02
CHCHD3-204ENST00000457942 MARCH4Q9P2E8 410 aaPredicted RBP15.17■□□□□ 0.02
CHCHD3-204ENST00000457942 IFT80Q9P2H3 777 aaPredicted RBP15.17■□□□□ 0.02
CHCHD3-204ENST00000457942 DHCR7Q9UBM7 475 aaKnown RBP15.17■□□□□ 0.02
CHCHD3-204ENST00000457942 ERRFI1Q9UJM3 462 aaPredicted RBP15.17■□□□□ 0.02
CHCHD3-204ENST00000457942 PLCL2Q9UPR0 1127 aa15.17■□□□□ 0.02
CHCHD3-204ENST00000457942 PTRH2Q9Y3E5 179 aaKnown RBP15.17■□□□□ 0.02
CHCHD3-204ENST00000457942 ZNF451Q9Y4E5 1061 aa15.17■□□□□ 0.02
CHCHD3-204ENST00000457942 OTOGQ6ZRI0 2925 aa15.17■□□□□ 0.02
CHCHD3-204ENST00000457942 CCDC88CQ9P219 2028 aa15.17■□□□□ 0.02
CHCHD3-204ENST00000457942 AP3B1O00203 1094 aa15.16■□□□□ 0.02
CHCHD3-204ENST00000457942 HCRTR1O43613 425 aa15.16■□□□□ 0.02
CHCHD3-204ENST00000457942 CEP104O60308 925 aa15.16■□□□□ 0.02
CHCHD3-204ENST00000457942 DDAH2O95865 285 aa15.16■□□□□ 0.02
CHCHD3-204ENST00000457942 CAPN1P07384 714 aa15.16■□□□□ 0.02
CHCHD3-204ENST00000457942 TPBGLP0DKB5 382 aa15.16■□□□□ 0.02
CHCHD3-204ENST00000457942 MAGP20916 626 aa15.16■□□□□ 0.02
CHCHD3-204ENST00000457942 EIF3BP55884 814 aaKnown RBP15.16■□□□□ 0.02
CHCHD3-204ENST00000457942 DCDP81605 110 aaKnown RBP15.16■□□□□ 0.02
CHCHD3-204ENST00000457942 RAPSNQ13702 412 aa15.16■□□□□ 0.02
CHCHD3-204ENST00000457942 RHBDD2Q6NTF9 364 aa15.16■□□□□ 0.02
CHCHD3-204ENST00000457942 TLDC1Q6P9B6 456 aa15.16■□□□□ 0.02
CHCHD3-204ENST00000457942 UNC5DQ6UXZ4 953 aa15.16■□□□□ 0.02
CHCHD3-204ENST00000457942 C4orf22Q6V702 233 aa15.16■□□□□ 0.02
CHCHD3-204ENST00000457942 RAB42Q8N4Z0 105 aa15.16■□□□□ 0.02
CHCHD3-204ENST00000457942 ZBTB2Q8N680 514 aa15.16■□□□□ 0.02
CHCHD3-204ENST00000457942 TMEM102Q8N9M5 508 aaPredicted RBP15.16■□□□□ 0.02
CHCHD3-204ENST00000457942 PROKR1Q8TCW9 393 aa15.16■□□□□ 0.02
CHCHD3-204ENST00000457942 SLC22A18Q96BI1 424 aa15.16■□□□□ 0.02
CHCHD3-204ENST00000457942 IL17FQ96PD4 163 aa15.16■□□□□ 0.02
CHCHD3-204ENST00000457942 PHF12Q96QT6 1004 aa15.16■□□□□ 0.02
CHCHD3-204ENST00000457942 INTS7Q9NVH2 962 aaKnown RBP15.16■□□□□ 0.02
CHCHD3-204ENST00000457942 GPR83Q9NYM4 423 aa15.16■□□□□ 0.02
CHCHD3-204ENST00000457942 TSR3Q9UJK0 312 aaKnown RBP15.16■□□□□ 0.02
CHCHD3-204ENST00000457942 KLHL20Q9Y2M5 609 aa15.16■□□□□ 0.02
CHCHD3-204ENST00000457942 PEX12O00623 359 aa15.15■□□□□ 0.02
CHCHD3-204ENST00000457942 ALAS2P22557 587 aa15.15■□□□□ 0.02
CHCHD3-204ENST00000457942 MGAT1P26572 445 aa15.15■□□□□ 0.02
CHCHD3-204ENST00000457942 AOAHP28039 575 aa15.15■□□□□ 0.02
CHCHD3-204ENST00000457942 NMBRP28336 390 aa15.15■□□□□ 0.02
CHCHD3-204ENST00000457942 KCNJ1P48048 391 aa15.15■□□□□ 0.02
CHCHD3-204ENST00000457942 NR6A1Q15406 480 aa15.15■□□□□ 0.02
CHCHD3-204ENST00000457942 SIX1Q15475 284 aaPredicted RBP15.15■□□□□ 0.02
CHCHD3-204ENST00000457942 ZNF385CQ66K41 422 aaPredicted RBP15.15■□□□□ 0.02
CHCHD3-204ENST00000457942 MED25Q71SY5 747 aa15.15■□□□□ 0.02
CHCHD3-204ENST00000457942 OTOAQ7RTW8 1153 aa15.15■□□□□ 0.02
CHCHD3-204ENST00000457942 MPP5Q8N3R9 675 aa15.15■□□□□ 0.02
CHCHD3-204ENST00000457942 LMNTD1Q8N9Z9 388 aa15.15■□□□□ 0.02
CHCHD3-204ENST00000457942 Q8NA96 180 aa15.15■□□□□ 0.02
CHCHD3-204ENST00000457942 FDCSPQ8NFU4 85 aa15.15■□□□□ 0.02
CHCHD3-204ENST00000457942 FLVCR1-AS1Q8TAF5 88 aa15.15■□□□□ 0.02
CHCHD3-204ENST00000457942 DLG3Q92796 817 aa15.15■□□□□ 0.02
CHCHD3-204ENST00000457942 FOPNLQ96NB1 174 aa15.15■□□□□ 0.02
CHCHD3-204ENST00000457942 GBP5Q96PP8 586 aa15.15■□□□□ 0.02
CHCHD3-204ENST00000457942 RAB11FIP5Q9BXF6 653 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms