RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 TAS2R13Q9NYV9 303 aa17.46■□□□□ 0.39
PDLIM2-215ENST00000456545 CDC23Q9UJX2 597 aa17.46■□□□□ 0.39
PDLIM2-215ENST00000456545 PCDHGA4Q9Y5G9 962 aa17.46■□□□□ 0.39
PDLIM2-215ENST00000456545 ZNF891A8MT65 544 aaPredicted RBP17.45■□□□□ 0.38
PDLIM2-215ENST00000456545 ZBTB14O43829 449 aa17.45■□□□□ 0.38
PDLIM2-215ENST00000456545 CPNE3O75131 537 aaKnown RBP17.45■□□□□ 0.38
PDLIM2-215ENST00000456545 KATNA1O75449 491 aa17.45■□□□□ 0.38
PDLIM2-215ENST00000456545 TIAF1O95411 115 aa17.45■□□□□ 0.38
PDLIM2-215ENST00000456545 MATN4O95460 622 aa17.45■□□□□ 0.38
PDLIM2-215ENST00000456545 SYF2O95926 243 aaKnown RBP17.45■□□□□ 0.38
PDLIM2-215ENST00000456545 AHSGP02765 367 aa17.45■□□□□ 0.38
PDLIM2-215ENST00000456545 KLK3P07288 261 aaPredicted RBP17.45■□□□□ 0.38
PDLIM2-215ENST00000456545 CBSLP0DN79 551 aa17.45■□□□□ 0.38
PDLIM2-215ENST00000456545 ENO3P13929 434 aaPredicted RBP17.45■□□□□ 0.38
PDLIM2-215ENST00000456545 CBSP35520 551 aa17.45■□□□□ 0.38
PDLIM2-215ENST00000456545 SKIV2L2P42285 1042 aaKnown RBP17.45■□□□□ 0.38
PDLIM2-215ENST00000456545 RGS4P49798 205 aa17.45■□□□□ 0.38
PDLIM2-215ENST00000456545 TSTA3Q13630 321 aaPredicted RBP17.45■□□□□ 0.38
PDLIM2-215ENST00000456545 GBX1Q14549 363 aa17.45■□□□□ 0.38
PDLIM2-215ENST00000456545 TEDDM1Q5T9Z0 273 aa17.45■□□□□ 0.38
PDLIM2-215ENST00000456545 NEK10Q6ZWH5 1172 aa17.45■□□□□ 0.38
PDLIM2-215ENST00000456545 LMNTD1Q8N9Z9 388 aa17.45■□□□□ 0.38
PDLIM2-215ENST00000456545 OR9A1PQ8NGU1 263 aa17.45■□□□□ 0.38
PDLIM2-215ENST00000456545 PYROXD1Q8WU10 500 aa17.45■□□□□ 0.38
PDLIM2-215ENST00000456545 CLIP3Q96DZ5 547 aa17.45■□□□□ 0.38
PDLIM2-215ENST00000456545 NDNQ99608 321 aa17.45■□□□□ 0.38
PDLIM2-215ENST00000456545 ZFATQ9P243 1243 aa17.45■□□□□ 0.38
PDLIM2-215ENST00000456545 PCDHB3Q9Y5E6 796 aa17.45■□□□□ 0.38
PDLIM2-215ENST00000456545 AHCTF1Q8WYP5 2266 aa17.44■□□□□ 0.38
PDLIM2-215ENST00000456545 E7EQ34 232 aa17.44■□□□□ 0.38
PDLIM2-215ENST00000456545 TUBB4AP04350 444 aa17.44■□□□□ 0.38
PDLIM2-215ENST00000456545 MPC1LP0DKB6 136 aa17.44■□□□□ 0.38
PDLIM2-215ENST00000456545 TCN2P20062 427 aa17.44■□□□□ 0.38
PDLIM2-215ENST00000456545 MCM3P25205 808 aa17.44■□□□□ 0.38
PDLIM2-215ENST00000456545 OAS2P29728 719 aaKnown RBP17.44■□□□□ 0.38
PDLIM2-215ENST00000456545 STAT5AP42229 794 aa17.44■□□□□ 0.38
PDLIM2-215ENST00000456545 ITGA1P56199 1179 aa17.44■□□□□ 0.38
PDLIM2-215ENST00000456545 MC1RQ01726 317 aa17.44■□□□□ 0.38
PDLIM2-215ENST00000456545 CAV1Q03135 178 aa17.44■□□□□ 0.38
PDLIM2-215ENST00000456545 MGAT5Q09328 741 aa17.44■□□□□ 0.38
PDLIM2-215ENST00000456545 GRB7Q14451 532 aa17.44■□□□□ 0.38
PDLIM2-215ENST00000456545 CCSMST1Q4G0I0 132 aa17.44■□□□□ 0.38
PDLIM2-215ENST00000456545 CDHR3Q6ZTQ4 885 aa17.44■□□□□ 0.38
PDLIM2-215ENST00000456545 CPNE9Q8IYJ1 553 aa17.44■□□□□ 0.38
PDLIM2-215ENST00000456545 GPATCH11Q8N954 259 aa17.44■□□□□ 0.38
PDLIM2-215ENST00000456545 LINC01555Q8NAE3 123 aa17.44■□□□□ 0.38
PDLIM2-215ENST00000456545 MR1Q95460 341 aa17.44■□□□□ 0.38
PDLIM2-215ENST00000456545 SLC30A3Q99726 388 aa17.44■□□□□ 0.38
PDLIM2-215ENST00000456545 SAYSD1Q9NPB0 183 aa17.44■□□□□ 0.38
PDLIM2-215ENST00000456545 LHX9Q9NQ69 397 aa17.44■□□□□ 0.38
PDLIM2-215ENST00000456545 SPATA7Q9P0W8 599 aa17.44■□□□□ 0.38
PDLIM2-215ENST00000456545 KCND3Q9UK17 655 aa17.44■□□□□ 0.38
PDLIM2-215ENST00000456545 CROTQ9UKG9 612 aa17.44■□□□□ 0.38
PDLIM2-215ENST00000456545 ZNF839A8K0R7 811 aa17.43■□□□□ 0.38
PDLIM2-215ENST00000456545 ERVH48-1M5A8F1 160 aa17.43■□□□□ 0.38
PDLIM2-215ENST00000456545 PSIP1O75475 530 aaKnown RBP17.43■□□□□ 0.38
PDLIM2-215ENST00000456545 WT1P19544 449 aaPredicted RBP17.43■□□□□ 0.38
PDLIM2-215ENST00000456545 PEBP1P30086 187 aaKnown RBP17.43■□□□□ 0.38
PDLIM2-215ENST00000456545 HSD17B2P37059 387 aa17.43■□□□□ 0.38
PDLIM2-215ENST00000456545 PLTPP55058 493 aa17.43■□□□□ 0.38
PDLIM2-215ENST00000456545 CYP4F2P78329 520 aa17.43■□□□□ 0.38
PDLIM2-215ENST00000456545 PDAP1Q13442 181 aaKnown RBP17.43■□□□□ 0.38
PDLIM2-215ENST00000456545 WHAMMP3Q1A5X7 153 aa17.43■□□□□ 0.38
PDLIM2-215ENST00000456545 STEAP4Q687X5 459 aa17.43■□□□□ 0.38
PDLIM2-215ENST00000456545 DUPD1Q68J44 220 aa17.43■□□□□ 0.38
PDLIM2-215ENST00000456545 LRRC8EQ6NSJ5 796 aa17.43■□□□□ 0.38
PDLIM2-215ENST00000456545 C16orf46Q6P387 395 aa17.43■□□□□ 0.38
PDLIM2-215ENST00000456545 TRMT10BQ6PF06 316 aaKnown RBP17.43■□□□□ 0.38
PDLIM2-215ENST00000456545 CAPN12Q6ZSI9 719 aa17.43■□□□□ 0.38
PDLIM2-215ENST00000456545 CNTN4Q8IWV2 1026 aa17.43■□□□□ 0.38
PDLIM2-215ENST00000456545 FAM20CQ8IXL6 584 aa17.43■□□□□ 0.38
PDLIM2-215ENST00000456545 OR1L3Q8NH93 324 aa17.43■□□□□ 0.38
PDLIM2-215ENST00000456545 CD200R1Q8TD46 325 aa17.43■□□□□ 0.38
PDLIM2-215ENST00000456545 SLC45A3Q96JT2 553 aa17.43■□□□□ 0.38
PDLIM2-215ENST00000456545 ACTR5Q9H9F9 607 aaPredicted RBP17.43■□□□□ 0.38
PDLIM2-215ENST00000456545 PTPRQQ9UMZ3 2332 aa17.42■□□□□ 0.38
PDLIM2-215ENST00000456545 PABPN1LA6NDY0 278 aaKnown RBP17.42■□□□□ 0.38
PDLIM2-215ENST00000456545 ARHGEF33A8MVX0 844 aa17.42■□□□□ 0.38
PDLIM2-215ENST00000456545 E7ESA3 106 aa17.42■□□□□ 0.38
PDLIM2-215ENST00000456545 KIF2AO00139 706 aaPredicted RBP17.42■□□□□ 0.38
PDLIM2-215ENST00000456545 EIF3HO15372 352 aaKnown RBP eCLIP17.42■□□□□ 0.38
PDLIM2-215ENST00000456545 OR2B3O76000 313 aa17.42■□□□□ 0.38
PDLIM2-215ENST00000456545 FKBP9O95302 570 aa17.42■□□□□ 0.38
PDLIM2-215ENST00000456545 HBQ1P09105 142 aa17.42■□□□□ 0.38
PDLIM2-215ENST00000456545 MSL3P1P0C860 447 aa17.42■□□□□ 0.38
PDLIM2-215ENST00000456545 MAGP20916 626 aa17.42■□□□□ 0.38
PDLIM2-215ENST00000456545 GABRB3P28472 473 aa17.42■□□□□ 0.38
PDLIM2-215ENST00000456545 RPA3P35244 121 aaPredicted RBP17.42■□□□□ 0.38
PDLIM2-215ENST00000456545 RPS15P62841 145 aaKnown RBP17.42■□□□□ 0.38
PDLIM2-215ENST00000456545 FASTKD3Q14CZ7 662 aaKnown RBP17.42■□□□□ 0.38
PDLIM2-215ENST00000456545 DEFB110Q30KQ9 67 aa17.42■□□□□ 0.38
PDLIM2-215ENST00000456545 C8orf74Q6P047 294 aa17.42■□□□□ 0.38
PDLIM2-215ENST00000456545 FIGLAQ6QHK4 219 aa17.42■□□□□ 0.38
PDLIM2-215ENST00000456545 UBE2R2Q712K3 238 aaPredicted RBP17.42■□□□□ 0.38
PDLIM2-215ENST00000456545 CCDC25Q86WR0 208 aa17.42■□□□□ 0.38
PDLIM2-215ENST00000456545 MYO1HQ8N1T3 1032 aa17.42■□□□□ 0.38
PDLIM2-215ENST00000456545 GIMAP7Q8NHV1 300 aa17.42■□□□□ 0.38
PDLIM2-215ENST00000456545 FLVCR1-AS1Q8TAF5 88 aa17.42■□□□□ 0.38
PDLIM2-215ENST00000456545 MENTQ9BUN1 341 aa17.42■□□□□ 0.38
PDLIM2-215ENST00000456545 FAM60AQ9NP50 221 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms