RNA–Protein interactions for RNA: ENST00000456385.5

CLIP4-208, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

TSL 2

Gene CLIP4, Length 2,311 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-208ENST00000456385 ANGPTL3Q9Y5C1 460 aa10.08□□□□□ -0.8
CLIP4-208ENST00000456385 GJA3Q9Y6H8 435 aa10.08□□□□□ -0.8
CLIP4-208ENST00000456385 HSPE1-MOB4S4R3N1 261 aa10.08□□□□□ -0.8
CLIP4-208ENST00000456385 DNAJC25-GNG10A0A024R161 153 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.07□□□□□ -0.8
CLIP4-208ENST00000456385 LOC285095A0A1B0GVY8 99 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 LOC110117498-PIK3R3F6TDL0 507 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 FFAR3O14843 346 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 TFECO14948 347 aaPredicted RBP10.07□□□□□ -0.8
CLIP4-208ENST00000456385 GPR42O15529 346 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 OR1I1O60431 355 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 TSPAN3O60637 253 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 ICMTO60725 284 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 NIPSNAP2O75323 286 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 CRYZL1O95825 349 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 DPEP1P16444 411 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 NUDT6P53370 316 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 P2RX3P56373 397 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 SLAMF1Q13291 335 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 KRR1Q13601 381 aaKnown RBP10.07□□□□□ -0.8
CLIP4-208ENST00000456385 PTPRNQ16849 979 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 OR2T5Q6IEZ7 315 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 SLC46A3Q7Z3Q1 461 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 VTCN1Q7Z7D3 282 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 CYP4Z2PQ8N1L4 340 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 ATG16L2Q8NAA4 619 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 OR52E4Q8NGH9 312 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 OR2T29Q8NH02 315 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 SUN5Q8TC36 379 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 FAM120BQ96EK7 910 aaKnown RBP10.07□□□□□ -0.8
CLIP4-208ENST00000456385 CDKN2AIPNLQ96HQ2 116 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 FYTTD1Q96QD9 318 aaKnown RBP10.07□□□□□ -0.8
CLIP4-208ENST00000456385 OR2A14Q96R47 310 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 ARPC5LQ9BPX5 153 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 KRT84Q9NSB2 600 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 NPAP1Q9NZP6 1156 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 RALGAPA2Q2PPJ7 1873 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 KRT87PA6NCN2 255 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 ZSCAN5BA6NJL1 495 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 UNCXA6NJT0 531 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 OR7A17O14581 309 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 RPLP0P05388 317 aaKnown RBP10.07□□□□□ -0.8
CLIP4-208ENST00000456385 HSMCR30P0CW71 290 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 ENDOUP21128 410 aaKnown RBP10.07□□□□□ -0.8
CLIP4-208ENST00000456385 CA5AP35218 305 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 ADCYAP1R1P41586 468 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 MAGEA2P43356 314 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 GPLD1P80108 840 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 VLDLRP98155 873 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 SLC14A1Q13336 389 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 VGLL4Q14135 290 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 ZMAT1Q5H9K5 638 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 WDR45BQ5MNZ6 344 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 UBXN11Q5T124 520 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 RAP1GAP2Q684P5 730 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 GPR153Q6NV75 609 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 ZNF517Q6ZMY9 492 aaPredicted RBP10.07□□□□□ -0.8
CLIP4-208ENST00000456385 ZNF551Q7Z340 670 aaPredicted RBP10.07□□□□□ -0.8
CLIP4-208ENST00000456385 ZNF438Q7Z4V0 828 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 SLC38A6Q8IZM9 456 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 LIX1Q8N485 282 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 TP53I13Q8NBR0 393 aaPredicted RBP10.07□□□□□ -0.8
CLIP4-208ENST00000456385 C3orf58Q8NDZ4 430 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 IPCEF1Q8WWN9 437 aaPredicted RBP10.07□□□□□ -0.8
CLIP4-208ENST00000456385 MYLPFQ96A32 169 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 LINGO1Q96FE5 620 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 SMARCD1Q96GM5 515 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 EGLN2Q96KS0 407 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 OR52E6Q96RD3 313 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 CITED4Q96RK1 184 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 SEMA3CQ99985 751 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 TM9SF3Q9HD45 589 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 SARS2Q9NP81 518 aaKnown RBP10.07□□□□□ -0.8
CLIP4-208ENST00000456385 TMEM45AQ9NWC5 275 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 C1orf109Q9NX04 203 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 KIF17Q9P2E2 1029 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 HECAQ9UBI9 543 aaPredicted RBP10.07□□□□□ -0.8
CLIP4-208ENST00000456385 MKLN1Q9UL63 735 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 ERVW-1Q9UQF0 538 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 BTBD3Q9Y2F9 522 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 IPPQ9Y573 584 aa10.07□□□□□ -0.8
CLIP4-208ENST00000456385 A0A0G2JMP0 313 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 LOC105371267A0A1B0GV96 52 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 IQCF5A8MTL0 148 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 EVPLLA8MZ36 301 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 IFRD1O00458 451 aaPredicted RBP10.06□□□□□ -0.8
CLIP4-208ENST00000456385 MUSKO15146 869 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 CAPN5O15484 640 aaPredicted RBP10.06□□□□□ -0.8
CLIP4-208ENST00000456385 DARSP14868 501 aaKnown RBP10.06□□□□□ -0.8
CLIP4-208ENST00000456385 HOXB8P17481 243 aaPredicted RBP10.06□□□□□ -0.8
CLIP4-208ENST00000456385 MAGEA11P43364 429 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 RFX2P48378 723 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 GZMMP51124 257 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 ARHGDIAP52565 204 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 UGT2B15P54855 530 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 STARD3Q14849 445 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 TYSND1Q2T9J0 566 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 ALFQ53S48 1182 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 SGO1Q5FBB7 561 aa10.06□□□□□ -0.8
CLIP4-208ENST00000456385 XKR4Q5GH76 650 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms