RNA–Protein interactions for RNA: ENST00000455631.5

PTPRA-208, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

TSL 5

Gene PTPRA, Length 1,107 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-208ENST00000455631 QKIQ96PU8 341 aaKnown RBP eCLIP22.26■■□□□ 1.157e-12■■■■■ 74.3
PTPRA-208ENST00000455631 GORASP1Q9BQQ3 440 aa22.26■■□□□ 1.15
PTPRA-208ENST00000455631 CRB3Q9BUF7 120 aa22.26■■□□□ 1.15
PTPRA-208ENST00000455631 GBA3Q9H227 469 aa22.26■■□□□ 1.15
PTPRA-208ENST00000455631 PLA2G3Q9NZ20 509 aa22.26■■□□□ 1.15
PTPRA-208ENST00000455631 PTGFRNQ9P2B2 879 aa22.26■■□□□ 1.15
PTPRA-208ENST00000455631 TRHDEQ9UKU6 1024 aa22.26■■□□□ 1.15
PTPRA-208ENST00000455631 LUC7L2Q9Y383 392 aaKnown RBP22.26■■□□□ 1.15
PTPRA-208ENST00000455631 MAP2K7O14733 419 aa22.25■■□□□ 1.15
PTPRA-208ENST00000455631 ANXA9O76027 345 aa22.25■■□□□ 1.15
PTPRA-208ENST00000455631 ONECUT2O95948 504 aa22.25■■□□□ 1.15
PTPRA-208ENST00000455631 ACPPP15309 386 aa22.25■■□□□ 1.15
PTPRA-208ENST00000455631 MCM3P25205 808 aa22.25■■□□□ 1.15
PTPRA-208ENST00000455631 OR1D4P47884 311 aa22.25■■□□□ 1.15
PTPRA-208ENST00000455631 TNFSF10P50591 281 aa22.25■■□□□ 1.15
PTPRA-208ENST00000455631 BRD3Q15059 726 aa22.25■■□□□ 1.15
PTPRA-208ENST00000455631 SLC18A3Q16572 532 aa22.25■■□□□ 1.15
PTPRA-208ENST00000455631 GPR33Q49SQ1 333 aa22.25■■□□□ 1.15
PTPRA-208ENST00000455631 CLEC17AQ6ZS10 378 aa22.25■■□□□ 1.15
PTPRA-208ENST00000455631 SERPINA9Q86WD7 417 aa22.25■■□□□ 1.15
PTPRA-208ENST00000455631 SEC14L3Q9UDX4 400 aa22.25■■□□□ 1.15
PTPRA-208ENST00000455631 HYOU1Q9Y4L1 999 aa22.25■■□□□ 1.15
PTPRA-208ENST00000455631 DCHS2Q6V1P9 2916 aa22.24■■□□□ 1.15
PTPRA-208ENST00000455631 LIN7AO14910 233 aaPredicted RBP22.24■■□□□ 1.15
PTPRA-208ENST00000455631 USP1O94782 785 aa22.24■■□□□ 1.15
PTPRA-208ENST00000455631 UQCRHP07919 91 aa22.24■■□□□ 1.15
PTPRA-208ENST00000455631 GSTM1P09488 218 aa22.24■■□□□ 1.15
PTPRA-208ENST00000455631 SSTR2P30874 369 aa22.24■■□□□ 1.15
PTPRA-208ENST00000455631 PBX1P40424 430 aa22.24■■□□□ 1.15
PTPRA-208ENST00000455631 ARHGAP25P42331 645 aa22.24■■□□□ 1.15
PTPRA-208ENST00000455631 GSTM4Q03013 218 aa22.24■■□□□ 1.15
PTPRA-208ENST00000455631 SRSF11Q05519 484 aaKnown RBP22.24■■□□□ 1.15
PTPRA-208ENST00000455631 TESK1Q15569 626 aa22.24■■□□□ 1.15
PTPRA-208ENST00000455631 RANBP10Q6VN20 620 aa22.24■■□□□ 1.15
PTPRA-208ENST00000455631 TAS2R42Q7RTR8 314 aa22.24■■□□□ 1.15
PTPRA-208ENST00000455631 KBTBD2Q8IY47 623 aa22.24■■□□□ 1.15
PTPRA-208ENST00000455631 OR5K2Q8NHB8 316 aa22.24■■□□□ 1.15
PTPRA-208ENST00000455631 MAU2Q9Y6X3 613 aa22.24■■□□□ 1.15
PTPRA-208ENST00000455631 ITPR3Q14573 2671 aa22.24■■□□□ 1.15
PTPRA-208ENST00000455631 KCNN4O15554 427 aa22.23■■□□□ 1.15
PTPRA-208ENST00000455631 KDM1AO60341 852 aa22.23■■□□□ 1.15
PTPRA-208ENST00000455631 F10P00742 488 aa22.23■■□□□ 1.15
PTPRA-208ENST00000455631 PRSS56P0CW18 603 aa22.23■■□□□ 1.15
PTPRA-208ENST00000455631 ACADLP28330 430 aa22.23■■□□□ 1.15
PTPRA-208ENST00000455631 GRM7Q14831 915 aa22.23■■□□□ 1.15
PTPRA-208ENST00000455631 ZNF800Q2TB10 664 aaPredicted RBP eCLIP22.23■■□□□ 1.15
PTPRA-208ENST00000455631 YOD1Q5VVQ6 348 aaPredicted RBP22.23■■□□□ 1.15
PTPRA-208ENST00000455631 XKRXQ6PP77 449 aa22.23■■□□□ 1.15
PTPRA-208ENST00000455631 NLRP9Q7RTR0 991 aa22.23■■□□□ 1.15
PTPRA-208ENST00000455631 PRSS58Q8IYP2 241 aa22.23■■□□□ 1.15
PTPRA-208ENST00000455631 TTC29Q8NA56 475 aaPredicted RBP22.23■■□□□ 1.15
PTPRA-208ENST00000455631 BRIX1Q8TDN6 353 aaKnown RBP22.23■■□□□ 1.15
PTPRA-208ENST00000455631 ELMO1Q92556 727 aa22.23■■□□□ 1.15
PTPRA-208ENST00000455631 C8orf44Q96CB5 159 aa22.23■■□□□ 1.15
PTPRA-208ENST00000455631 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP22.23■■□□□ 1.15
PTPRA-208ENST00000455631 VSTM2BA6NLU5 285 aa22.22■■□□□ 1.15
PTPRA-208ENST00000455631 AP2A1O95782 977 aa22.22■■□□□ 1.15
PTPRA-208ENST00000455631 CRYABP02511 175 aaKnown RBP22.22■■□□□ 1.15
PTPRA-208ENST00000455631 GYPCP04921 128 aa22.22■■□□□ 1.15
PTPRA-208ENST00000455631 MST1P26927 711 aa22.22■■□□□ 1.15
PTPRA-208ENST00000455631 ADRA1AP35348 466 aa22.22■■□□□ 1.15
PTPRA-208ENST00000455631 CARSP49589 748 aaKnown RBP22.22■■□□□ 1.15
PTPRA-208ENST00000455631 CASP6P55212 293 aa22.22■■□□□ 1.15
PTPRA-208ENST00000455631 KRTAP10-9P60411 292 aa22.22■■□□□ 1.15
PTPRA-208ENST00000455631 RBPJQ06330 500 aa22.22■■□□□ 1.15
PTPRA-208ENST00000455631 KLC1Q07866 573 aa22.22■■□□□ 1.15
PTPRA-208ENST00000455631 TAZQ16635 292 aa22.22■■□□□ 1.15
PTPRA-208ENST00000455631 SYTL3Q4VX76 610 aa22.22■■□□□ 1.15
PTPRA-208ENST00000455631 ITPRIPL1Q6GPH6 555 aa22.22■■□□□ 1.15
PTPRA-208ENST00000455631 SPNS3Q6ZMD2 512 aa22.22■■□□□ 1.15
PTPRA-208ENST00000455631 CDH24Q86UP0 819 aa22.22■■□□□ 1.15
PTPRA-208ENST00000455631 DTWD1Q8N5C7 304 aa22.22■■□□□ 1.15
PTPRA-208ENST00000455631 SIRT6Q8N6T7 355 aa22.22■■□□□ 1.15
PTPRA-208ENST00000455631 IQCDQ96DY2 449 aa22.22■■□□□ 1.15
PTPRA-208ENST00000455631 DNAJC1Q96KC8 554 aaKnown RBP22.22■■□□□ 1.15
PTPRA-208ENST00000455631 CAMSAP3Q9P1Y5 1249 aaPredicted RBP22.22■■□□□ 1.15
PTPRA-208ENST00000455631 ABI3Q9P2A4 366 aa22.22■■□□□ 1.15
PTPRA-208ENST00000455631 NSG1A0A0A6YYJ2 146 aa22.21■■□□□ 1.15
PTPRA-208ENST00000455631 TRBV5-4A0A0C4DH59 114 aa22.21■■□□□ 1.15
PTPRA-208ENST00000455631 HACD1B0YJ81 288 aa22.21■■□□□ 1.15
PTPRA-208ENST00000455631 SPOPO43791 374 aa22.21■■□□□ 1.15
PTPRA-208ENST00000455631 AP2A2O94973 939 aa22.21■■□□□ 1.15
PTPRA-208ENST00000455631 RASAL1O95294 804 aa22.21■■□□□ 1.15
PTPRA-208ENST00000455631 SOX11P35716 441 aa22.21■■□□□ 1.15
PTPRA-208ENST00000455631 GRIA3P42263 894 aa22.21■■□□□ 1.15
PTPRA-208ENST00000455631 NSG1P42857 185 aa22.21■■□□□ 1.15
PTPRA-208ENST00000455631 MSLNQ13421 630 aaPredicted RBP22.21■■□□□ 1.15
PTPRA-208ENST00000455631 NAPRTQ6XQN6 538 aa22.21■■□□□ 1.15
PTPRA-208ENST00000455631 TAX1BP1Q86VP1 789 aa22.21■■□□□ 1.15
PTPRA-208ENST00000455631 ANP32EQ9BTT0 268 aa22.21■■□□□ 1.15
PTPRA-208ENST00000455631 C10orf88Q9H8K7 445 aa22.21■■□□□ 1.15
PTPRA-208ENST00000455631 SMARCAL1Q9NZC9 954 aa22.21■■□□□ 1.15
PTPRA-208ENST00000455631 IL1RAPL1Q9NZN1 696 aa22.21■■□□□ 1.15
PTPRA-208ENST00000455631 CPAMD8Q8IZJ3 1885 aa22.2■■□□□ 1.14
PTPRA-208ENST00000455631 C19orf84I3L1E1 186 aa22.2■■□□□ 1.14
PTPRA-208ENST00000455631 PRICKLE3O43900 615 aaPredicted RBP22.2■■□□□ 1.14
PTPRA-208ENST00000455631 DIAPH2O60879 1101 aa22.2■■□□□ 1.14
PTPRA-208ENST00000455631 PRR35P0CG20 571 aa22.2■■□□□ 1.14
PTPRA-208ENST00000455631 PSMB4P28070 264 aa22.2■■□□□ 1.14
PTPRA-208ENST00000455631 PKLRP30613 574 aa22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms