RNA–Protein interactions for RNA: ENST00000455546.6

GTF3C3-208, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 4

Gene GTF3C3, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-208ENST00000455546 IL11RAQ14626 422 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 PLCL1Q15111 1095 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 GPR19Q15760 415 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 SLC14A2Q15849 920 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 TFDP3Q5H9I0 405 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 LDLRAP1Q5SW96 308 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 AGAP9Q5VTM2 703 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 METRNLQ641Q3 311 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 PDPK2PQ6A1A2 396 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 DENND5AQ6IQ26 1287 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 WASH2PQ6VEQ5 465 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 BZW1Q7L1Q6 419 aaKnown RBP4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 DAAM2Q86T65 1068 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 PPP1R3BQ86XI6 285 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 VSIG1Q86XK7 387 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 PPIL6Q8IXY8 311 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 CFAP206Q8IYR0 622 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 TC2NQ8N9U0 490 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 SIDT2Q8NBJ9 832 aaKnown RBP4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 SLC38A9Q8NBW4 561 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 OR4K2Q8NGD2 314 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 OR13C4Q8NGS5 318 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 BRSK1Q8TDC3 778 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 CT55Q8WUE5 264 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 ZDHHC12Q96GR4 267 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 HRASLS5Q96KN8 279 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 C12orf66Q96MD2 445 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 CLUHP3Q96NS8 147 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 VPS35Q96QK1 796 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 EFHD1Q9BUP0 239 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 TWSG1Q9GZX9 223 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 TSPY26PQ9H489 355 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 EPB41L1Q9H4G0 881 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 TRABDQ9H4I3 376 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 ZNF768Q9H5H4 540 aaKnown RBP4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 ASB8Q9H765 288 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 LHX9Q9NQ69 397 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 WASH6PQ9NQA3 447 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 POT1Q9NUX5 634 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 HRASLS2Q9NWW9 162 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 NFKBIL1Q9UBC1 381 aaPredicted RBP4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 RSPH14Q9UHP6 348 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 LCMT1Q9UIC8 334 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 TMEFF2Q9UIK5 374 aaPredicted RBP4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 PADI1Q9ULC6 663 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 INTUQ9ULD6 942 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 PKP3Q9Y446 797 aa4.57□□□□□ -1.68
GTF3C3-208ENST00000455546 TMEM82A0PJX8 343 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 MACROD2A1Z1Q3 448 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 CCDC78A2IDD5 438 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 CCDC66A2RUB6 948 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 OR5K3A6NET4 321 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 MGAT4DA6NG13 374 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 SLC9B1P1A6NJY1 282 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 TOX3O15405 576 aaPredicted RBP4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 KCNN4O15554 427 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 PSTPIP1O43586 416 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 SGTAO43765 313 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 KCNJ13O60928 360 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 SRP72O76094 671 aaKnown RBP4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 ZNF205O95201 554 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 TPM1P09493 284 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 MTHFD1P11586 935 aaKnown RBP4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 PVRP15151 417 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 HLA-DPA1P20036 260 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 LPOP22079 712 aaPredicted RBP4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 PSMB4P28070 264 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 PDHA2P29803 388 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 HOXC12P31275 282 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 SSTR4P31391 388 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 AKT1P31749 480 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 ADRA1AP35348 466 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 CASRP41180 1078 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 TNNT3P45378 269 aaPredicted RBP4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 KPNA2P52292 529 aaKnown RBP4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 NAP1L1P55209 391 aaKnown RBP4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 XIAPP98170 497 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 MC1RQ01726 317 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 OTUD4Q01804 1114 aaKnown RBP4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 DMPKQ09013 629 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 PRKG2Q13237 762 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 MSLNQ13421 630 aaPredicted RBP4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 IKZF1Q13422 519 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 TUBB3Q13509 450 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 DNASE1L3Q13609 305 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 ITGA9Q13797 1035 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 KRT33BQ14525 404 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 TAF1AQ15573 450 aaPredicted RBP4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 LONRF2Q1L5Z9 754 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 MSMPQ1L6U9 139 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 NADK2Q4G0N4 442 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 LACTB2Q53H82 288 aaPredicted RBP4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 DNTTIP2Q5QJE6 756 aaKnown RBP4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 ANKRD20A2Q5SQ80 823 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 CCDC181Q5TID7 509 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 ANKRD20A1Q5TYW2 823 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 ANKRD20A3Q5VUR7 823 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 HIST2H2BCQ6DN03 193 aa4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 DARS2Q6PI48 645 aaKnown RBP4.56□□□□□ -1.68
GTF3C3-208ENST00000455546 MYO7BQ6PIF6 2116 aa4.56□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms