RNA–Protein interactions for RNA: ENST00000455220.6

CCDC90B-202, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 1 (best) BASIC

Gene CCDC90B, Length 1,550 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-202ENST00000455220 PHF21BQ96EK2 531 aa16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 IL17FQ96PD4 163 aa16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 C1QTNF3Q9BXJ4 246 aa16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 TWSG1Q9GZX9 223 aa16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 RXFP3Q9NSD7 469 aa16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 INTS9Q9NV88 658 aaKnown RBP16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 PLAGL1Q9UM63 463 aa16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 ICKQ9UPZ9 632 aa16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 ASCC3Q8N3C0 2202 aaKnown RBP16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 LY6G6EA0A0G2JKS1 128 aa16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 PPM1DO15297 605 aa16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 SIGLEC6O43699 453 aa16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 NUDT21O43809 227 aaKnown RBP16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 SHMT2P34897 504 aa16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 PNLIPRP1P54315 467 aa16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 HERVK_113P63132 956 aa16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 PCBP2Q15366 365 aaKnown RBP eCLIP16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 ANKS6Q68DC2 871 aa16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 ZNF438Q7Z4V0 828 aa16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 NUDCD3Q8IVD9 361 aa16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 RAB42Q8N4Z0 105 aa16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 OR6Y1Q8NGX8 325 aa16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 OR56A3Q8NH54 315 aa16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 SH3KBP1Q96B97 665 aa16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 L3HYPDHQ96EM0 354 aa16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 APOLD1Q96LR9 279 aa16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 TMEM237Q96Q45 408 aa16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 ERVK-6Q9BXR3 956 aa16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 TMEM9BQ9NQ34 198 aa16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 WWOXQ9NZC7 414 aa16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 LNPEPQ9UIQ6 1025 aa16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 TNPO3Q9Y5L0 923 aaKnown RBP16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 U3KQA8 63 aa16.09■□□□□ 0.17
CCDC90B-202ENST00000455220 FAM221BA6H8Z2 402 aa16.08■□□□□ 0.16
CCDC90B-202ENST00000455220 LILRA5A6NI73 299 aa16.08■□□□□ 0.16
CCDC90B-202ENST00000455220 ZNF839A8K0R7 811 aa16.08■□□□□ 0.16
CCDC90B-202ENST00000455220 E7ENX8 843 aa16.08■□□□□ 0.16
CCDC90B-202ENST00000455220 FLRT2O43155 660 aa16.08■□□□□ 0.16
CCDC90B-202ENST00000455220 TRIM13O60858 407 aa16.08■□□□□ 0.16
CCDC90B-202ENST00000455220 RPS17P08708 135 aaKnown RBP16.08■□□□□ 0.16
CCDC90B-202ENST00000455220 FGF3P11487 239 aaPredicted RBP16.08■□□□□ 0.16
CCDC90B-202ENST00000455220 IMPDH1P20839 514 aa16.08■□□□□ 0.16
CCDC90B-202ENST00000455220 GRK6P43250 576 aa16.08■□□□□ 0.16
CCDC90B-202ENST00000455220 AGTR2P50052 363 aa16.08■□□□□ 0.16
CCDC90B-202ENST00000455220 TAP2Q03519 686 aa16.08■□□□□ 0.16
CCDC90B-202ENST00000455220 NR1D2Q14995 579 aa16.08■□□□□ 0.16
CCDC90B-202ENST00000455220 C18orf21Q32NC0 220 aaPredicted RBP16.08■□□□□ 0.16
CCDC90B-202ENST00000455220 INAVAQ3KP66 663 aa16.08■□□□□ 0.16
CCDC90B-202ENST00000455220 ZNF678Q5SXM1 525 aa16.08■□□□□ 0.16
CCDC90B-202ENST00000455220 RAB44Q7Z6P3 723 aaPredicted RBP16.08■□□□□ 0.16
CCDC90B-202ENST00000455220 EID2Q8N6I1 236 aa16.08■□□□□ 0.16
CCDC90B-202ENST00000455220 LINC01555Q8NAE3 123 aa16.08■□□□□ 0.16
CCDC90B-202ENST00000455220 OR2L8Q8NGY9 312 aa16.08■□□□□ 0.16
CCDC90B-202ENST00000455220 LCN9Q8WX39 176 aa16.08■□□□□ 0.16
CCDC90B-202ENST00000455220 NRTNQ99748 197 aa16.08■□□□□ 0.16
CCDC90B-202ENST00000455220 PAIP2Q9BPZ3 127 aaKnown RBP16.08■□□□□ 0.16
CCDC90B-202ENST00000455220 LDHAL6BQ9BYZ2 381 aaPredicted RBP16.08■□□□□ 0.16
CCDC90B-202ENST00000455220 CD244Q9BZW8 370 aa16.08■□□□□ 0.16
CCDC90B-202ENST00000455220 OR6C2Q9NZP2 312 aa16.08■□□□□ 0.16
CCDC90B-202ENST00000455220 BTBD3Q9Y2F9 522 aa16.08■□□□□ 0.16
CCDC90B-202ENST00000455220 ASB1Q9Y576 335 aa16.08■□□□□ 0.16
CCDC90B-202ENST00000455220 RNF215Q9Y6U7 377 aa16.08■□□□□ 0.16
CCDC90B-202ENST00000455220 RIF1Q5UIP0 2472 aaKnown RBP16.08■□□□□ 0.16
CCDC90B-202ENST00000455220 COL5A1P20908 1838 aaPredicted RBP16.07■□□□□ 0.16
CCDC90B-202ENST00000455220 STK16O75716 305 aa16.07■□□□□ 0.16
CCDC90B-202ENST00000455220 SIX3O95343 332 aaPredicted RBP16.07■□□□□ 0.16
CCDC90B-202ENST00000455220 GLB1P16278 677 aa16.07■□□□□ 0.16
CCDC90B-202ENST00000455220 HSPA7P48741 367 aa16.07■□□□□ 0.16
CCDC90B-202ENST00000455220 NHLH1Q02575 133 aa16.07■□□□□ 0.16
CCDC90B-202ENST00000455220 ASPHQ12797 758 aa16.07■□□□□ 0.16
CCDC90B-202ENST00000455220 FASTKQ14296 549 aaKnown RBP16.07■□□□□ 0.16
CCDC90B-202ENST00000455220 NR0B2Q15466 257 aa16.07■□□□□ 0.16
CCDC90B-202ENST00000455220 PROX2Q3B8N5 592 aa16.07■□□□□ 0.16
CCDC90B-202ENST00000455220 PTCHD3Q3KNS1 767 aa16.07■□□□□ 0.16
CCDC90B-202ENST00000455220 FBXO48Q5FWF7 155 aa16.07■□□□□ 0.16
CCDC90B-202ENST00000455220 AMIGO1Q86WK6 493 aa16.07■□□□□ 0.16
CCDC90B-202ENST00000455220 SYTL1Q8IYJ3 562 aa16.07■□□□□ 0.16
CCDC90B-202ENST00000455220 OR6C4Q8NGE1 309 aa16.07■□□□□ 0.16
CCDC90B-202ENST00000455220 SGPP1Q9BX95 441 aa16.07■□□□□ 0.16
CCDC90B-202ENST00000455220 ATG10Q9H0Y0 220 aa16.07■□□□□ 0.16
CCDC90B-202ENST00000455220 XKR8Q9H6D3 395 aa16.07■□□□□ 0.16
CCDC90B-202ENST00000455220 PADI4Q9UM07 663 aa16.07■□□□□ 0.16
CCDC90B-202ENST00000455220 WDR91A4D1P6 747 aa16.06■□□□□ 0.16
CCDC90B-202ENST00000455220 LRRC14BA6NHZ5 514 aa16.06■□□□□ 0.16
CCDC90B-202ENST00000455220 E2F3O00716 465 aa16.06■□□□□ 0.16
CCDC90B-202ENST00000455220 CD59P13987 128 aa16.06■□□□□ 0.16
CCDC90B-202ENST00000455220 EEF1DP29692 281 aaKnown RBP16.06■□□□□ 0.16
CCDC90B-202ENST00000455220 TBPL1P62380 186 aa16.06■□□□□ 0.16
CCDC90B-202ENST00000455220 NAE1Q13564 534 aa16.06■□□□□ 0.16
CCDC90B-202ENST00000455220 PLCL1Q15111 1095 aa16.06■□□□□ 0.16
CCDC90B-202ENST00000455220 PDK4Q16654 411 aa16.06■□□□□ 0.16
CCDC90B-202ENST00000455220 UNC50Q53HI1 259 aa16.06■□□□□ 0.16
CCDC90B-202ENST00000455220 LRRC70Q7Z2Q7 622 aa16.06■□□□□ 0.16
CCDC90B-202ENST00000455220 PPFIBP2Q8ND30 876 aa16.06■□□□□ 0.16
CCDC90B-202ENST00000455220 OR4E2Q8NGC2 313 aa16.06■□□□□ 0.16
CCDC90B-202ENST00000455220 RAB3IL1Q8TBN0 382 aa16.06■□□□□ 0.16
CCDC90B-202ENST00000455220 SREK1Q8WXA9 508 aaKnown RBP16.06■□□□□ 0.16
CCDC90B-202ENST00000455220 JPH3Q8WXH2 748 aaPredicted RBP16.06■□□□□ 0.16
CCDC90B-202ENST00000455220 SMPDL3AQ92484 453 aa16.06■□□□□ 0.16
CCDC90B-202ENST00000455220 ESAMQ96AP7 390 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms