RNA–Protein interactions for RNA: ENST00000454952.1

NIF3L1-209, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 719 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-209ENST00000454952 VSTM4Q8IW00 320 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 ZNF655Q8N720 491 aaPredicted RBP7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 PHC3Q8NDX5 983 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 OR13C4Q8NGS5 318 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 OR5K2Q8NHB8 316 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 STYXQ8WUJ0 223 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 OR2A14Q96R47 310 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 APOL2Q9BQE5 337 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 KLHL25Q9H0H3 589 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 FAM96AQ9H5X1 160 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 XKR8Q9H6D3 395 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 EPS8L2Q9H6S3 715 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 LRRC40Q9H9A6 602 aa7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 NLE1Q9NVX2 485 aaPredicted RBP7.73□□□□□ -1.17
NIF3L1-209ENST00000454952 CENPEQ02224 2701 aa7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 A0A1B0GUH1 482 aa7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 A0A1B0GX78 115 aa7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 HEATR9A2RTY3 570 aa7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 ISM1B1AKI9 464 aa7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 AKR1B15C9JRZ8 316 aaPredicted RBP7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 H3BMH7 237 aa7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 PJA2O43164 708 aa7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 ONECUT2O95948 504 aa7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 S1PR4O95977 384 aa7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 PTMAP06454 111 aaKnown RBP7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 OR56A5P0C7T3 313 aa7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 RBP3P10745 1247 aa7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 ACADLP28330 430 aa7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 PDHA2P29803 388 aa7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 PPARGP37231 505 aaPredicted RBP7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 MAGEA1P43355 309 aa7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 TSFMP43897 325 aaKnown RBP7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 OTUD4Q01804 1114 aaKnown RBP7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 MSLNQ13421 630 aaPredicted RBP7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 GRM7Q14831 915 aa7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 CRB2Q5IJ48 1285 aa7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 TCTE1Q5JU00 501 aa7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 ARHGEF18Q6ZSZ5 1173 aa7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 CUZD1Q86UP6 607 aa7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 DNAJC22Q8N4W6 341 aa7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 RAB42Q8N4Z0 105 aa7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 OR5AR1Q8NGP9 310 aa7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 ACTL9Q8TC94 416 aa7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 ELMO1Q92556 727 aa7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 DNAJC1Q96KC8 554 aaKnown RBP7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 GORASP1Q9BQQ3 440 aa7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 RAB11FIP5Q9BXF6 653 aa7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 HEMGNQ9BXL5 484 aa7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 OSBPL8Q9BZF1 889 aa7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 SPRTNQ9H040 489 aaPredicted RBP7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 SLC26A1Q9H2B4 701 aa7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 FAM60AQ9NP50 221 aa7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 SEMA3GQ9NS98 782 aa7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 EURLQ9NYK6 297 aa7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 SMARCAL1Q9NZC9 954 aa7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 CDC23Q9UJX2 597 aa7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 FBXL4Q9UKA2 621 aa7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 ENTPD4Q9Y227 616 aa7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 CDYLQ9Y232 598 aa7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 TDRKHQ9Y2W6 561 aaKnown RBP7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 MRFAP1Q9Y605 127 aa7.72□□□□□ -1.17
NIF3L1-209ENST00000454952 PCSK5Q92824 1860 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 GOLGA6L9A6NEM1 432 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 DSCR3O14972 297 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 IPO7O95373 1038 aaKnown RBP7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 UMODP07911 640 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 MYBL2P10244 700 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 ALAS2P22557 587 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 ELAVL4P26378 380 aaKnown RBP7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 COL8A1P27658 744 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 TNFRSF8P28908 595 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 CTNNA1P35221 906 aaKnown RBP7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 GABRA4P48169 554 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 CARSP49589 748 aaKnown RBP7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 RAB28P51157 221 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 CDC16Q13042 620 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 ZNF169Q14929 603 aaPredicted RBP7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 NAA25Q14CX7 972 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 ZIC1Q15915 447 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 INAQ16352 499 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 DBN1Q16643 649 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 PARP6Q2NL67 630 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 DEFB110Q30KQ9 67 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 FAM214AQ32MH5 1076 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 TUBB8Q3ZCM7 444 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 DENND5AQ6IQ26 1287 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 TTC23LQ6PF05 361 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 FAM180AQ6UWF9 173 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 IGFL2Q6UWQ7 119 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 OVCH1Q7RTY7 1134 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 LINC00523Q86TU6 105 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 TRIM73Q86UV7 250 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 KCNMB4Q86W47 210 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 MCATQ8IVS2 390 aaKnown RBP7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 KLHDC8BQ8IXV7 354 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 CCDC170Q8IYT3 715 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 CLDN19Q8N6F1 224 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 BCORP1Q8N888 145 aa7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 TTC29Q8NA56 475 aaPredicted RBP7.71□□□□□ -1.18
NIF3L1-209ENST00000454952 DNAJB14Q8TBM8 379 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms