RNA–Protein interactions for RNA: ENST00000454542.5

HDAC4-205, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-205ENST00000454542 FKBP9O95302 570 aa13.69□□□□□ -0.22
HDAC4-205ENST00000454542 WISP3O95389 354 aaPredicted RBP13.69□□□□□ -0.22
HDAC4-205ENST00000454542 CATP04040 527 aaKnown RBP13.69□□□□□ -0.22
HDAC4-205ENST00000454542 FOLR1P15328 257 aa13.69□□□□□ -0.22
HDAC4-205ENST00000454542 CDH3P22223 829 aa13.69□□□□□ -0.22
HDAC4-205ENST00000454542 ITPKBP27987 946 aa13.69□□□□□ -0.22
HDAC4-205ENST00000454542 SKIV2L2P42285 1042 aaKnown RBP13.69□□□□□ -0.22
HDAC4-205ENST00000454542 MAGEA4P43358 317 aa13.69□□□□□ -0.22
HDAC4-205ENST00000454542 GABRA4P48169 554 aa13.69□□□□□ -0.22
HDAC4-205ENST00000454542 ACY1Q03154 408 aa13.69□□□□□ -0.22
HDAC4-205ENST00000454542 SP140Q13342 867 aa13.69□□□□□ -0.22
HDAC4-205ENST00000454542 TUBB3Q13509 450 aa13.69□□□□□ -0.22
HDAC4-205ENST00000454542 MAP7Q14244 749 aa13.69□□□□□ -0.22
HDAC4-205ENST00000454542 KCNAB1Q14722 419 aa13.69□□□□□ -0.22
HDAC4-205ENST00000454542 LARP7Q4G0J3 582 aaKnown RBP eCLIP13.69□□□□□ -0.22
HDAC4-205ENST00000454542 STRA8Q7Z7C7 330 aa13.69□□□□□ -0.22
HDAC4-205ENST00000454542 ZFAND4Q86XD8 727 aa13.69□□□□□ -0.22
HDAC4-205ENST00000454542 C19orf47Q8N9M1 422 aaKnown RBP13.69□□□□□ -0.22
HDAC4-205ENST00000454542 ASB11Q8WXH4 323 aa13.69□□□□□ -0.22
HDAC4-205ENST00000454542 ZNF501Q96CX3 271 aaPredicted RBP13.69□□□□□ -0.22
HDAC4-205ENST00000454542 OR6C1Q96RD1 312 aa13.69□□□□□ -0.22
HDAC4-205ENST00000454542 CTRCQ99895 268 aa13.69□□□□□ -0.22
HDAC4-205ENST00000454542 LRRC4CQ9HCJ2 640 aa13.69□□□□□ -0.22
HDAC4-205ENST00000454542 CIDEBQ9UHD4 219 aa13.69□□□□□ -0.22
HDAC4-205ENST00000454542 TSR3Q9UJK0 312 aaKnown RBP13.69□□□□□ -0.22
HDAC4-205ENST00000454542 PILRAQ9UKJ1 303 aa13.69□□□□□ -0.22
HDAC4-205ENST00000454542 KLK4Q9Y5K2 254 aa13.69□□□□□ -0.22
HDAC4-205ENST00000454542 ITPR1Q14643 2758 aa13.69□□□□□ -0.22
HDAC4-205ENST00000454542 FAM95CA0A1B0GW59 222 aa13.68□□□□□ -0.22
HDAC4-205ENST00000454542 A0A1W2PPV9 198 aa13.68□□□□□ -0.22
HDAC4-205ENST00000454542 SLC9B1P1A6NJY1 282 aa13.68□□□□□ -0.22
HDAC4-205ENST00000454542 CXorf49A8MYA2 514 aaPredicted RBP13.68□□□□□ -0.22
HDAC4-205ENST00000454542 PVRP15151 417 aa13.68□□□□□ -0.22
HDAC4-205ENST00000454542 ZNF37AP17032 561 aaPredicted RBP13.68□□□□□ -0.22
HDAC4-205ENST00000454542 MCM3P25205 808 aa13.68□□□□□ -0.22
HDAC4-205ENST00000454542 TUBB4BP68371 445 aa13.68□□□□□ -0.22
HDAC4-205ENST00000454542 ARHGAP19Q14CB8 494 aa13.68□□□□□ -0.22
HDAC4-205ENST00000454542 ZIC1Q15915 447 aa13.68□□□□□ -0.22
HDAC4-205ENST00000454542 TTC23LQ6PF05 361 aa13.68□□□□□ -0.22
HDAC4-205ENST00000454542 PAQR3Q6TCH7 311 aa13.68□□□□□ -0.22
HDAC4-205ENST00000454542 LRRC69Q6ZNQ3 347 aa13.68□□□□□ -0.22
HDAC4-205ENST00000454542 CAPN12Q6ZSI9 719 aa13.68□□□□□ -0.22
HDAC4-205ENST00000454542 TRIM73Q86UV7 250 aa13.68□□□□□ -0.22
HDAC4-205ENST00000454542 BPHLQ86WA6 291 aaPredicted RBP13.68□□□□□ -0.22
HDAC4-205ENST00000454542 PALM2Q8IXS6 379 aa13.68□□□□□ -0.22
HDAC4-205ENST00000454542 GPATCH11Q8N954 259 aa13.68□□□□□ -0.22
HDAC4-205ENST00000454542 OR9A1PQ8NGU1 263 aa13.68□□□□□ -0.22
HDAC4-205ENST00000454542 OR8K5Q8NH50 307 aa13.68□□□□□ -0.22
HDAC4-205ENST00000454542 SNRNP27Q8WVK2 155 aaKnown RBP13.68□□□□□ -0.22
HDAC4-205ENST00000454542 SKA2Q8WVK7 121 aaPredicted RBP13.68□□□□□ -0.22
HDAC4-205ENST00000454542 DLG3Q92796 817 aa13.68□□□□□ -0.22
HDAC4-205ENST00000454542 SLC22A18Q96BI1 424 aa13.68□□□□□ -0.22
HDAC4-205ENST00000454542 VPS39Q96JC1 886 aa13.68□□□□□ -0.22
HDAC4-205ENST00000454542 FCRL4Q96PJ5 515 aa13.68□□□□□ -0.22
HDAC4-205ENST00000454542 FUT8Q9BYC5 575 aa13.68□□□□□ -0.22
HDAC4-205ENST00000454542 SYTL2Q9HCH5 934 aa13.68□□□□□ -0.22
HDAC4-205ENST00000454542 DSPP15924 2871 aaKnown RBP13.68□□□□□ -0.22
HDAC4-205ENST00000454542 H3BMH7 237 aa13.67□□□□□ -0.22
HDAC4-205ENST00000454542 KLK10O43240 276 aa13.67□□□□□ -0.22
HDAC4-205ENST00000454542 RAD1O60671 282 aa13.67□□□□□ -0.22
HDAC4-205ENST00000454542 STK17BO94768 372 aa13.67□□□□□ -0.22
HDAC4-205ENST00000454542 TIAF1O95411 115 aa13.67□□□□□ -0.22
HDAC4-205ENST00000454542 ZNF28P17035 718 aa13.67□□□□□ -0.22
HDAC4-205ENST00000454542 STX2P32856 288 aa13.67□□□□□ -0.22
HDAC4-205ENST00000454542 RGS4P49798 205 aa13.67□□□□□ -0.22
HDAC4-205ENST00000454542 UCNP55089 124 aa13.67□□□□□ -0.22
HDAC4-205ENST00000454542 FOXM1Q08050 763 aa13.67□□□□□ -0.22
HDAC4-205ENST00000454542 NAB1Q13506 487 aa13.67□□□□□ -0.22
HDAC4-205ENST00000454542 TGIF1Q15583 401 aa13.67□□□□□ -0.22
HDAC4-205ENST00000454542 C3orf62Q6ZUJ4 267 aa13.67□□□□□ -0.22
HDAC4-205ENST00000454542 TIPARPQ7Z3E1 657 aaKnown RBP13.67□□□□□ -0.22
HDAC4-205ENST00000454542 CCDC25Q86WR0 208 aa13.67□□□□□ -0.22
HDAC4-205ENST00000454542 PPP1R3BQ86XI6 285 aa13.67□□□□□ -0.22
HDAC4-205ENST00000454542 LRRC56Q8IYG6 542 aaPredicted RBP13.67□□□□□ -0.22
HDAC4-205ENST00000454542 LMNTD1Q8N9Z9 388 aa13.67□□□□□ -0.22
HDAC4-205ENST00000454542 LRRN4CLQ8ND94 238 aa13.67□□□□□ -0.22
HDAC4-205ENST00000454542 CDKL2Q92772 493 aa13.67□□□□□ -0.22
HDAC4-205ENST00000454542 NKD1Q969G9 470 aa13.67□□□□□ -0.22
HDAC4-205ENST00000454542 PDLIM5Q96HC4 596 aaKnown RBP13.67□□□□□ -0.22
HDAC4-205ENST00000454542 NAF1Q96HR8 494 aaKnown RBP13.67□□□□□ -0.22
HDAC4-205ENST00000454542 GPR22Q99680 433 aa13.67□□□□□ -0.22
HDAC4-205ENST00000454542 RBBP8Q99708 897 aa13.67□□□□□ -0.22
HDAC4-205ENST00000454542 CPNE1Q99829 537 aa13.67□□□□□ -0.22
HDAC4-205ENST00000454542 POPDC3Q9HBV1 291 aa13.67□□□□□ -0.22
HDAC4-205ENST00000454542 ENAMQ9NRM1 1142 aa13.67□□□□□ -0.22
HDAC4-205ENST00000454542 FGF21Q9NSA1 209 aa13.67□□□□□ -0.22
HDAC4-205ENST00000454542 SOHLH2Q9NX45 425 aa13.67□□□□□ -0.22
HDAC4-205ENST00000454542 RARRES3Q9UL19 164 aa13.67□□□□□ -0.22
HDAC4-205ENST00000454542 SLC39A10Q9ULF5 831 aa13.67□□□□□ -0.22
HDAC4-205ENST00000454542 VWA7Q9Y334 891 aa13.67□□□□□ -0.22
HDAC4-205ENST00000454542 SLC16A5O15375 505 aa13.66□□□□□ -0.22
HDAC4-205ENST00000454542 PIAS1O75925 651 aa13.66□□□□□ -0.22
HDAC4-205ENST00000454542 C8GP07360 202 aa13.66□□□□□ -0.22
HDAC4-205ENST00000454542 OAS2P29728 719 aaKnown RBP13.66□□□□□ -0.22
HDAC4-205ENST00000454542 GP5P40197 560 aa13.66□□□□□ -0.22
HDAC4-205ENST00000454542 PGGT1BP53609 377 aa13.66□□□□□ -0.22
HDAC4-205ENST00000454542 TAS2R39P59534 338 aa13.66□□□□□ -0.22
HDAC4-205ENST00000454542 PDAP1Q13442 181 aaKnown RBP13.66□□□□□ -0.22
HDAC4-205ENST00000454542 GPR19Q15760 415 aa13.66□□□□□ -0.22
HDAC4-205ENST00000454542 ZKSCAN8Q15776 578 aaPredicted RBP13.66□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms