RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 SNX7Q9UNH6 387 aa9.34□□□□□ -0.91
USP54-207ENST00000451492 TP53TG5Q9Y2B4 290 aa9.34□□□□□ -0.91
USP54-207ENST00000451492 PCSK5Q92824 1860 aa9.34□□□□□ -0.91
USP54-207ENST00000451492 ANKRD12Q6UB98 2062 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 COL6A6A6NMZ7 2263 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 ARGFXA6NJG6 315 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 SDR42E2A6NKP2 422 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 C21orf140B9A014 251 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 RASGRF2O14827 1237 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 CBSLP0DN79 551 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 SFTPCP11686 197 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 OGNP20774 298 aaKnown RBP9.33□□□□□ -0.92
USP54-207ENST00000451492 CD9P21926 228 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 PTPN4P29074 926 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 CBSP35520 551 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 GRIA3P42263 894 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 MAGEA6P43360 314 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 FNTAP49354 379 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 FOXL2P58012 376 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 GNG11P61952 73 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 MPP1Q00013 466 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 GRB7Q14451 532 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 KIR2DS3Q14952 304 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 SF1Q15637 639 aaKnown RBP9.33□□□□□ -0.92
USP54-207ENST00000451492 KYNUQ16719 465 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 SLC5A12Q1EHB4 618 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 HP1BP3Q5SSJ5 553 aaPredicted RBP9.33□□□□□ -0.92
USP54-207ENST00000451492 PLEKHS1Q5SXH7 462 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 IZUMO3Q5VZ72 239 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 NEPROQ6NW34 567 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 FAM198BQ6UWH4 519 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 CENPUQ71F23 418 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 LRRC6Q86X45 466 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 CILP2Q8IUL8 1156 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 PPIL6Q8IXY8 311 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 ZBTB2Q8N680 514 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 NAT8LQ8N9F0 302 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 ABHD17AQ96GS6 310 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 TCTN2Q96GX1 697 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 FCRL4Q96PJ5 515 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 SLC30A3Q99726 388 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 TRIM51Q9BSJ1 452 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 ACAT2Q9BWD1 397 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 CCDC68Q9H2F9 335 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 ADNPQ9H2P0 1102 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 XAB2Q9HCS7 855 aaKnown RBP9.33□□□□□ -0.92
USP54-207ENST00000451492 LATS2Q9NRM7 1088 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 IARS2Q9NSE4 1012 aaKnown RBP9.33□□□□□ -0.92
USP54-207ENST00000451492 STARD5Q9NSY2 213 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 TXLNGQ9NUQ3 528 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 NDOR1Q9UHB4 597 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 FARSAQ9Y285 508 aaKnown RBP9.33□□□□□ -0.92
USP54-207ENST00000451492 NEU2Q9Y3R4 380 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 PCDHGA6Q9Y5G7 932 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 KCNMB2Q9Y691 235 aa9.33□□□□□ -0.92
USP54-207ENST00000451492 MDC1Q14676 2089 aaKnown RBP9.33□□□□□ -0.92
USP54-207ENST00000451492 ZCWPW2A0A1B0GU75 182 aa9.32□□□□□ -0.92
USP54-207ENST00000451492 FAM237BA0A1B0GVD1 139 aa9.32□□□□□ -0.92
USP54-207ENST00000451492 C9J4A7 227 aa9.32□□□□□ -0.92
USP54-207ENST00000451492 DNALI1O14645 258 aaPredicted RBP9.32□□□□□ -0.92
USP54-207ENST00000451492 KPNA5O15131 536 aa9.32□□□□□ -0.92
USP54-207ENST00000451492 ZSCAN9O15535 394 aaPredicted RBP9.32□□□□□ -0.92
USP54-207ENST00000451492 NRP2O60462 931 aa9.32□□□□□ -0.92
USP54-207ENST00000451492 RFPL1O75677 317 aa9.32□□□□□ -0.92
USP54-207ENST00000451492 USP1O94782 785 aa9.32□□□□□ -0.92
USP54-207ENST00000451492 SLCO2B1O94956 709 aa9.32□□□□□ -0.92
USP54-207ENST00000451492 C1orf105O95561 183 aa9.32□□□□□ -0.92
USP54-207ENST00000451492 SYF2O95926 243 aaKnown RBP9.32□□□□□ -0.92
USP54-207ENST00000451492 ESR1P03372 595 aa9.32□□□□□ -0.92
USP54-207ENST00000451492 MLNP12872 115 aa9.32□□□□□ -0.92
USP54-207ENST00000451492 PKMP14618 531 aaKnown RBP9.32□□□□□ -0.92
USP54-207ENST00000451492 OTX2P32243 289 aa9.32□□□□□ -0.92
USP54-207ENST00000451492 RORAP35398 523 aa9.32□□□□□ -0.92
USP54-207ENST00000451492 PTGIRP43119 386 aa9.32□□□□□ -0.92
USP54-207ENST00000451492 DHX9Q08211 1270 aaKnown RBP9.32□□□□□ -0.92
USP54-207ENST00000451492 PTK6Q13882 451 aa9.32□□□□□ -0.92
USP54-207ENST00000451492 FASTKQ14296 549 aaKnown RBP9.32□□□□□ -0.92
USP54-207ENST00000451492 LONRF1Q17RB8 773 aa9.32□□□□□ -0.92
USP54-207ENST00000451492 KLHL38Q2WGJ6 581 aa9.32□□□□□ -0.92
USP54-207ENST00000451492 BBS9Q3SYG4 887 aa9.32□□□□□ -0.92
USP54-207ENST00000451492 LACTB2Q53H82 288 aaPredicted RBP9.32□□□□□ -0.92
USP54-207ENST00000451492 ACSBG2Q5FVE4 666 aa9.32□□□□□ -0.92
USP54-207ENST00000451492 RNASEH2BQ5TBB1 312 aaKnown RBP9.32□□□□□ -0.92
USP54-207ENST00000451492 MLIPQ5VWP3 458 aa9.32□□□□□ -0.92
USP54-207ENST00000451492 SUSD1Q6UWL2 747 aa9.32□□□□□ -0.92
USP54-207ENST00000451492 SYVN1Q86TM6 617 aa9.32□□□□□ -0.92
USP54-207ENST00000451492 KCNMB4Q86W47 210 aa9.32□□□□□ -0.92
USP54-207ENST00000451492 RAB42Q8N4Z0 105 aa9.32□□□□□ -0.92
USP54-207ENST00000451492 METTL27Q8N6F8 245 aaPredicted RBP9.32□□□□□ -0.92
USP54-207ENST00000451492 PPFIBP2Q8ND30 876 aa9.32□□□□□ -0.92
USP54-207ENST00000451492 MCUQ8NE86 351 aa9.32□□□□□ -0.92
USP54-207ENST00000451492 OR2L8Q8NGY9 312 aa9.32□□□□□ -0.92
USP54-207ENST00000451492 MENTQ9BUN1 341 aa9.32□□□□□ -0.92
USP54-207ENST00000451492 RAB11FIP5Q9BXF6 653 aa9.32□□□□□ -0.92
USP54-207ENST00000451492 TRIM55Q9BYV6 548 aa9.32□□□□□ -0.92
USP54-207ENST00000451492 TRIM31Q9BZY9 425 aa9.32□□□□□ -0.92
USP54-207ENST00000451492 SYTL2Q9HCH5 934 aa9.32□□□□□ -0.92
USP54-207ENST00000451492 SLC17A6Q9P2U8 582 aa9.32□□□□□ -0.92
USP54-207ENST00000451492 GPN3Q9UHW5 284 aaPredicted RBP9.32□□□□□ -0.92
USP54-207ENST00000451492 ZNF462Q96JM2 2506 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms