RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 TEX44Q53QW1 395 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 C3orf38Q5JPI3 329 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 KHDC1LQ5JSQ8 128 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 CLLU1Q5K131 121 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 C6orf52Q5T4I8 152 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 INTS11Q5TA45 600 aaKnown RBP3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 LCE4AQ5TA78 99 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 HES5Q5TA89 166 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 MANEALQ5VSG8 457 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 TMEM200BQ69YZ2 307 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 XAF1Q6GPH4 301 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 LAMTOR1Q6IAA8 161 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 PMF1Q6P1K2 205 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 GGT6Q6P531 493 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 ZC3H14Q6PJT7 736 aaKnown RBP3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 CD300LDQ6UXZ3 194 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 DPP8Q6V1X1 898 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 NPSR1Q6W5P4 371 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 SH2D5Q6ZV89 423 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 PLEKHM3Q6ZWE6 761 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 G2E3Q7L622 706 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 TAS1R1Q7RTX1 841 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 AACSQ86V21 672 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 HORMAD1Q86X24 394 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 PPP1R3BQ86XI6 285 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 FAM90A1Q86YD7 464 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 HIPK1Q86Z02 1210 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 ZC3H3Q8IXZ2 948 aaKnown RBP3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 UNC5BQ8IZJ1 945 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 SIX6OS1Q8N1H7 587 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 SCML4Q8N228 414 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 TBC1D19Q8N5T2 526 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 ANKRD13CQ8N6S4 541 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 ZNF366Q8N895 744 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 PRELID2Q8N945 189 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 ANKFN1Q8N957 763 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 C12orf29Q8N999 325 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 ZNF540Q8NDQ6 660 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 BEST2Q8NFU1 509 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 SETD6Q8TBK2 473 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 DYNC2LI1Q8TCX1 351 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 MGARPQ8TDB4 240 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 TRAPPC12Q8WVT3 735 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 CPA5Q8WXQ8 436 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 SLC7A6Q92536 515 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 ALG3Q92685 438 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 SNAPC3Q92966 411 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 ZNF566Q969W8 418 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 SLC22A18Q96BI1 424 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 PPWD1Q96BP3 646 aaKnown RBP3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 ZHX1-C8orf76Q96EF9 292 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 C19orf60Q96EN9 201 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 MRPL48Q96GC5 212 aaKnown RBP3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 MAGED4Q96JG8 741 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 RADILQ96JH8 1075 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 TMEM209Q96SK2 561 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 KCNK16Q96T55 309 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 EIF2AK1Q9BQI3 630 aaKnown RBP3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 PDCD2LQ9BRP1 358 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 SYT11Q9BT88 431 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 THTPAQ9BU02 230 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 AP1M1Q9BXS5 423 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 CPEB1Q9BZB8 566 aaKnown RBP3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 DPH1Q9BZG8 443 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 TINAGL1Q9GZM7 467 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 NYXQ9GZU5 481 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 NAA50Q9GZZ1 169 aaKnown RBP3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 ALX4Q9H161 411 aaPredicted RBP3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 OR51M1Q9H341 326 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 ESRP2Q9H6T0 727 aaKnown RBP3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 GAREM1Q9H706 876 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 SMYD3Q9H7B4 428 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 CATSPERBQ9H7T0 1116 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 COG4Q9H9E3 785 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 CAB39LQ9H9S4 337 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 EFCAB1Q9HAE3 211 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 BCO1Q9HAY6 547 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 ERVK-5Q9HDB9 667 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 MRPS30Q9NP92 439 aaKnown RBP3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 HPS4Q9NQG7 708 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 NECTIN3Q9NQS3 549 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 ITM2CQ9NQX7 267 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 GSN-AS1Q9NRJ2 163 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 PCDHB16Q9NRJ7 776 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 PLSCR3Q9NRY6 295 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 ABCC13Q9NSE7 274 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 DNAJC17Q9NVM6 304 aaKnown RBP3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 BABAM1Q9NWV8 329 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 ING3Q9NXR8 418 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 OR6C2Q9NZP2 312 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 COPG2Q9UBF2 871 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 MTRRQ9UBK8 725 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 CD300AQ9UGN4 299 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 TRPS1Q9UHF7 1281 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 BTNL2Q9UIR0 455 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 KLHL21Q9UJP4 597 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 DBNLQ9UJU6 430 aaKnown RBP3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 ACSL5Q9ULC5 683 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 SPATA2Q9UM82 520 aa3.55□□□□□ -1.84
HMGB3P8-201ENST00000449709 COG5Q9UP83 839 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms