RNA–Protein interactions for RNA: ENST00000448770.5

POLR1B-209, Transcript of RNA polymerase I subunit B, humanhuman

TSL 1 (best)

Gene POLR1B, Length 2,494 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1B-209ENST00000448770 CELF2O95319 508 aaKnown RBP13.34□□□□□ -0.27
POLR1B-209ENST00000448770 PRAMEF1O95521 474 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 CCDC159P0C7I6 412 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 ITGAMP11215 1152 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 IGFBP5P24593 272 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 GKP32189 559 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 MAGEA2P43356 314 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 NEK2P51955 445 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 SEMG2Q02383 582 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 EPS8Q12929 822 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 NPTX1Q15818 432 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 PTRHD1Q6GMV3 140 aaKnown RBP13.34□□□□□ -0.27
POLR1B-209ENST00000448770 CCDC81Q6ZN84 652 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 RNF168Q8IYW5 571 aaPredicted RBP13.34□□□□□ -0.27
POLR1B-209ENST00000448770 DYNC2LI1Q8TCX1 351 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 USP7Q93009 1102 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 VMP1Q96GC9 406 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 PYURFQ96I23 114 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 DUSP21Q9H596 190 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 WWOXQ9NZC7 414 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 TRIM17Q9Y577 477 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 PCDHGB1Q9Y5G3 927 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 LAMA3Q16787 3333 aa13.34□□□□□ -0.27
POLR1B-209ENST00000448770 UPK3BL1B0FP48 263 aa13.33□□□□□ -0.28
POLR1B-209ENST00000448770 UPK3BL2E5RIL1 263 aa13.33□□□□□ -0.28
POLR1B-209ENST00000448770 PER2O15055 1255 aa13.33□□□□□ -0.28
POLR1B-209ENST00000448770 COCHO43405 550 aa13.33□□□□□ -0.28
POLR1B-209ENST00000448770 LRATO95237 230 aa13.33□□□□□ -0.28
POLR1B-209ENST00000448770 NADKO95544 446 aaPredicted RBP13.33□□□□□ -0.28
POLR1B-209ENST00000448770 FADS2O95864 444 aaKnown RBP13.33□□□□□ -0.28
POLR1B-209ENST00000448770 IL6P05231 212 aa13.33□□□□□ -0.28
POLR1B-209ENST00000448770 IRF1P10914 325 aa13.33□□□□□ -0.28
POLR1B-209ENST00000448770 IL1RL1Q01638 556 aa13.33□□□□□ -0.28
POLR1B-209ENST00000448770 PGS1Q32NB8 556 aa13.33□□□□□ -0.28
POLR1B-209ENST00000448770 LRIF1Q5T3J3 769 aa13.33□□□□□ -0.28
POLR1B-209ENST00000448770 ZDHHC21Q8IVQ6 265 aa13.33□□□□□ -0.28
POLR1B-209ENST00000448770 PIK3C3Q8NEB9 887 aa13.33□□□□□ -0.28
POLR1B-209ENST00000448770 OR7A2PQ8NGA2 310 aa13.33□□□□□ -0.28
POLR1B-209ENST00000448770 WFDC5Q8TCV5 224 aa13.33□□□□□ -0.28
POLR1B-209ENST00000448770 FAM120BQ96EK7 910 aaKnown RBP13.33□□□□□ -0.28
POLR1B-209ENST00000448770 REXO5Q96IC2 774 aaKnown RBP13.33□□□□□ -0.28
POLR1B-209ENST00000448770 TSSK3Q96PN8 268 aa13.33□□□□□ -0.28
POLR1B-209ENST00000448770 OPTCQ9UBM4 332 aa13.33□□□□□ -0.28
POLR1B-209ENST00000448770 VPS4AQ9UN37 437 aa13.33□□□□□ -0.28
POLR1B-209ENST00000448770 GABRQQ9UN88 632 aa13.33□□□□□ -0.28
POLR1B-209ENST00000448770 NUP214P35658 2090 aaPredicted RBP13.33□□□□□ -0.28
POLR1B-209ENST00000448770 SCN8AQ9UQD0 1980 aa13.33□□□□□ -0.28
POLR1B-209ENST00000448770 ILVBLA1L0T0 632 aa13.33□□□□□ -0.28
POLR1B-209ENST00000448770 TTC34A8MYJ7 566 aa13.33□□□□□ -0.28
POLR1B-209ENST00000448770 hCG_2039718K7EN88 272 aa13.33□□□□□ -0.28
POLR1B-209ENST00000448770 M0QX08 132 aa13.33□□□□□ -0.28
POLR1B-209ENST00000448770 ULK1O75385 1050 aa13.33□□□□□ -0.28
POLR1B-209ENST00000448770 STC2O76061 302 aa13.33□□□□□ -0.28
POLR1B-209ENST00000448770 PDYNP01213 254 aa13.33□□□□□ -0.28
POLR1B-209ENST00000448770 CORO1AP31146 461 aaKnown RBP13.33□□□□□ -0.28
POLR1B-209ENST00000448770 EIF2B2P49770 351 aaKnown RBP13.33□□□□□ -0.28
POLR1B-209ENST00000448770 TOP3AQ13472 1001 aaPredicted RBP13.33□□□□□ -0.28
POLR1B-209ENST00000448770 CPSF6Q16630 551 aaKnown RBP eCLIP13.33□□□□□ -0.28
POLR1B-209ENST00000448770 PAGE2BQ5JRK9 111 aa13.33□□□□□ -0.28
POLR1B-209ENST00000448770 ATG9BQ674R7 924 aa13.33□□□□□ -0.28
POLR1B-209ENST00000448770 SHQ1Q6PI26 577 aaKnown RBP13.33□□□□□ -0.28
POLR1B-209ENST00000448770 PRSS55Q6UWB4 352 aaPredicted RBP13.33□□□□□ -0.28
POLR1B-209ENST00000448770 VTCN1Q7Z7D3 282 aa13.33□□□□□ -0.28
POLR1B-209ENST00000448770 RASAL3Q86YV0 1011 aa13.33□□□□□ -0.28
POLR1B-209ENST00000448770 GLMNQ92990 594 aa13.33□□□□□ -0.28
POLR1B-209ENST00000448770 SPATA17Q96L03 361 aa13.33□□□□□ -0.28
POLR1B-209ENST00000448770 HEPHQ9BQS7 1158 aa13.33□□□□□ -0.28
POLR1B-209ENST00000448770 ADGRE3Q9BY15 652 aa13.33□□□□□ -0.28
POLR1B-209ENST00000448770 MAGIXQ9H6Y5 334 aa13.33□□□□□ -0.28
POLR1B-209ENST00000448770 MBD1Q9UIS9 605 aaPredicted RBP13.33□□□□□ -0.28
POLR1B-209ENST00000448770 PIKFYVEQ9Y2I7 2098 aa13.32□□□□□ -0.28
POLR1B-209ENST00000448770 GOLGA8CPA6NN73 597 aa13.32□□□□□ -0.28
POLR1B-209ENST00000448770 A8MX80 341 aa13.32□□□□□ -0.28
POLR1B-209ENST00000448770 KPNA4O00629 521 aaPredicted RBP13.32□□□□□ -0.28
POLR1B-209ENST00000448770 SYN3O14994 580 aa13.32□□□□□ -0.28
POLR1B-209ENST00000448770 PRAMEF4O60810 478 aa13.32□□□□□ -0.28
POLR1B-209ENST00000448770 S100BP04271 92 aaPredicted RBP13.32□□□□□ -0.28
POLR1B-209ENST00000448770 LCKP06239 509 aa13.32□□□□□ -0.28
POLR1B-209ENST00000448770 TGFBR2P37173 567 aa13.32□□□□□ -0.28
POLR1B-209ENST00000448770 VLDLRP98155 873 aa13.32□□□□□ -0.28
POLR1B-209ENST00000448770 GTF2H3Q13889 308 aa13.32□□□□□ -0.28
POLR1B-209ENST00000448770 CLCA4Q14CN2 919 aa13.32□□□□□ -0.28
POLR1B-209ENST00000448770 INAQ16352 499 aa13.32□□□□□ -0.28
POLR1B-209ENST00000448770 PRAMEF9Q5VWM5 478 aa13.32□□□□□ -0.28
POLR1B-209ENST00000448770 CAPN13Q6MZZ7 669 aaPredicted RBP13.32□□□□□ -0.28
POLR1B-209ENST00000448770 OR6Q1Q8NGQ2 317 aa13.32□□□□□ -0.28
POLR1B-209ENST00000448770 GPR63Q9BZJ6 419 aa13.32□□□□□ -0.28
POLR1B-209ENST00000448770 TM6SF2Q9BZW4 377 aa13.32□□□□□ -0.28
POLR1B-209ENST00000448770 DNMT3LQ9UJW3 386 aa13.32□□□□□ -0.28
POLR1B-209ENST00000448770 ANGPTL3Q9Y5C1 460 aa13.32□□□□□ -0.28
POLR1B-209ENST00000448770 SLC28A1O00337 649 aa13.32□□□□□ -0.28
POLR1B-209ENST00000448770 CLDN11O75508 207 aa13.32□□□□□ -0.28
POLR1B-209ENST00000448770 ZNF682O95780 498 aa13.32□□□□□ -0.28
POLR1B-209ENST00000448770 JUNDP17535 347 aa13.32□□□□□ -0.28
POLR1B-209ENST00000448770 HMGCLP35914 325 aa13.32□□□□□ -0.28
POLR1B-209ENST00000448770 RPS14P62263 151 aaKnown RBP13.32□□□□□ -0.28
POLR1B-209ENST00000448770 GPR17Q13304 367 aa13.32□□□□□ -0.28
POLR1B-209ENST00000448770 ACOX1Q15067 660 aa13.32□□□□□ -0.28
POLR1B-209ENST00000448770 MAPK11Q15759 364 aa13.32□□□□□ -0.28
POLR1B-209ENST00000448770 ZC3H12BQ5HYM0 836 aaKnown RBP13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms