RNA–Protein interactions for RNA: ENST00000447669.6

RFFL-206, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 2,030 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-206ENST00000447669 C1orf210Q8IVY1 113 aa24.16■■□□□ 1.46
RFFL-206ENST00000447669 CLYBLQ8N0X4 340 aa24.16■■□□□ 1.46
RFFL-206ENST00000447669 JPH3Q8WXH2 748 aaPredicted RBP24.16■■□□□ 1.46
RFFL-206ENST00000447669 ZNF382Q96SR6 550 aa24.16■■□□□ 1.46
RFFL-206ENST00000447669 HBEGFQ99075 208 aa24.16■■□□□ 1.46
RFFL-206ENST00000447669 DNAJC28Q9NX36 388 aa24.16■■□□□ 1.46
RFFL-206ENST00000447669 RNF11Q9Y3C5 154 aa24.16■■□□□ 1.46
RFFL-206ENST00000447669 PCM1Q15154 2024 aa24.16■■□□□ 1.46
RFFL-206ENST00000447669 NUDT1P36639 197 aa24.15■■□□□ 1.46
RFFL-206ENST00000447669 MAGEA9P43362 315 aa24.15■■□□□ 1.46
RFFL-206ENST00000447669 KANK2Q63ZY3 851 aa24.15■■□□□ 1.46
RFFL-206ENST00000447669 THOC6Q86W42 341 aaKnown RBP24.15■■□□□ 1.46
RFFL-206ENST00000447669 TCAIMQ8N3R3 496 aa24.15■■□□□ 1.46
RFFL-206ENST00000447669 GIMAP2Q9UG22 337 aa24.15■■□□□ 1.46
RFFL-206ENST00000447669 FGF4P08620 206 aa24.15■■□□□ 1.46
RFFL-206ENST00000447669 RPE65Q16518 533 aa24.15■■□□□ 1.46
RFFL-206ENST00000447669 SPRED3Q2MJR0 410 aa24.15■■□□□ 1.46
RFFL-206ENST00000447669 TRPM8Q7Z2W7 1104 aa24.15■■□□□ 1.46
RFFL-206ENST00000447669 MILR1Q7Z6M3 343 aa24.15■■□□□ 1.46
RFFL-206ENST00000447669 DCUN1D3Q8IWE4 304 aa24.15■■□□□ 1.46
RFFL-206ENST00000447669 MFSD2AQ8NA29 543 aa24.15■■□□□ 1.46
RFFL-206ENST00000447669 FBXO15Q8NCQ5 510 aaPredicted RBP24.15■■□□□ 1.46
RFFL-206ENST00000447669 PATE1Q8WXA2 126 aa24.15■■□□□ 1.46
RFFL-206ENST00000447669 MYLK2Q9H1R3 596 aa24.15■■□□□ 1.46
RFFL-206ENST00000447669 XKR8Q9H6D3 395 aa24.15■■□□□ 1.46
RFFL-206ENST00000447669 G3BP2Q9UN86 482 aaKnown RBP24.15■■□□□ 1.46
RFFL-206ENST00000447669 SH2B3Q9UQQ2 575 aa24.15■■□□□ 1.46
RFFL-206ENST00000447669 DGKBQ9Y6T7 804 aa24.15■■□□□ 1.46
RFFL-206ENST00000447669 KLHL33A6NCF5 533 aa24.14■■□□□ 1.45
RFFL-206ENST00000447669 E9PBE3 544 aa24.14■■□□□ 1.45
RFFL-206ENST00000447669 TOR1BO14657 336 aa24.14■■□□□ 1.45
RFFL-206ENST00000447669 FFAR3O14843 346 aa24.14■■□□□ 1.45
RFFL-206ENST00000447669 GPR42O15529 346 aa24.14■■□□□ 1.45
RFFL-206ENST00000447669 KLHL41O60662 606 aa24.14■■□□□ 1.45
RFFL-206ENST00000447669 GPR37L1O60883 481 aa24.14■■□□□ 1.45
RFFL-206ENST00000447669 CRCPO75575 148 aa24.14■■□□□ 1.45
RFFL-206ENST00000447669 MAPK9P45984 424 aa24.14■■□□□ 1.45
RFFL-206ENST00000447669 RACK1P63244 317 aaKnown RBP24.14■■□□□ 1.45
RFFL-206ENST00000447669 YBX1P67809 324 aaKnown RBP24.14■■□□□ 1.45
RFFL-206ENST00000447669 TWIST2Q8WVJ9 160 aa24.14■■□□□ 1.45
RFFL-206ENST00000447669 NMUR2Q9GZQ4 415 aa24.14■■□□□ 1.45
RFFL-206ENST00000447669 TRIT1Q9H3H1 467 aaKnown RBP24.14■■□□□ 1.45
RFFL-206ENST00000447669 ARMCX1Q9P291 453 aa24.14■■□□□ 1.45
RFFL-206ENST00000447669 CCT8L1PA6NM43 557 aa24.13■■□□□ 1.45
RFFL-206ENST00000447669 SDHDO14521 159 aa24.13■■□□□ 1.45
RFFL-206ENST00000447669 PIP5K1BO14986 540 aa24.13■■□□□ 1.45
RFFL-206ENST00000447669 CAPN1P07384 714 aa24.13■■□□□ 1.45
RFFL-206ENST00000447669 LINC00032P0C843 101 aa24.13■■□□□ 1.45
RFFL-206ENST00000447669 HTR6P50406 440 aa24.13■■□□□ 1.45
RFFL-206ENST00000447669 TBPL1P62380 186 aa24.13■■□□□ 1.45
RFFL-206ENST00000447669 TMEM198Q66K66 360 aa24.13■■□□□ 1.45
RFFL-206ENST00000447669 LRRC70Q7Z2Q7 622 aa24.13■■□□□ 1.45
RFFL-206ENST00000447669 OR56A3Q8NH54 315 aa24.13■■□□□ 1.45
RFFL-206ENST00000447669 RAD51AP1Q96B01 352 aa24.13■■□□□ 1.45
RFFL-206ENST00000447669 SKA1Q96BD8 255 aa24.13■■□□□ 1.45
RFFL-206ENST00000447669 ERP27Q96DN0 273 aa24.13■■□□□ 1.45
RFFL-206ENST00000447669 PCED1AQ9H1Q7 454 aa24.13■■□□□ 1.45
RFFL-206ENST00000447669 DNAJC11Q9NVH1 559 aa24.13■■□□□ 1.45
RFFL-206ENST00000447669 VTI1BQ9UEU0 232 aa24.13■■□□□ 1.45
RFFL-206ENST00000447669 E7ENX8 843 aa24.13■■□□□ 1.45
RFFL-206ENST00000447669 TLR4O00206 839 aa24.13■■□□□ 1.45
RFFL-206ENST00000447669 GIPC1O14908 333 aa24.13■■□□□ 1.45
RFFL-206ENST00000447669 SNUPNO95149 360 aaKnown RBP24.13■■□□□ 1.45
RFFL-206ENST00000447669 TAP2Q03519 686 aa24.13■■□□□ 1.45
RFFL-206ENST00000447669 LSM12Q3MHD2 195 aaKnown RBP24.13■■□□□ 1.45
RFFL-206ENST00000447669 NXNQ6DKJ4 435 aa24.13■■□□□ 1.45
RFFL-206ENST00000447669 PARGQ86W56 976 aa24.13■■□□□ 1.45
RFFL-206ENST00000447669 LRRC56Q8IYG6 542 aaPredicted RBP24.13■■□□□ 1.45
RFFL-206ENST00000447669 PHACTR4Q8IZ21 702 aa24.13■■□□□ 1.45
RFFL-206ENST00000447669 MARK4Q96L34 752 aa24.13■■□□□ 1.45
RFFL-206ENST00000447669 MENTQ9BUN1 341 aa24.13■■□□□ 1.45
RFFL-206ENST00000447669 DUSP15Q9H1R2 295 aaPredicted RBP24.13■■□□□ 1.45
RFFL-206ENST00000447669 TRNAU1APQ9NX07 287 aaKnown RBP24.13■■□□□ 1.45
RFFL-206ENST00000447669 ZNF624Q9P2J8 865 aaPredicted RBP24.13■■□□□ 1.45
RFFL-206ENST00000447669 KCNJ13O60928 360 aa24.12■■□□□ 1.45
RFFL-206ENST00000447669 OTCP00480 354 aa24.12■■□□□ 1.45
RFFL-206ENST00000447669 JUNDP17535 347 aa24.12■■□□□ 1.45
RFFL-206ENST00000447669 PNLIPRP1P54315 467 aa24.12■■□□□ 1.45
RFFL-206ENST00000447669 KRT33BQ14525 404 aa24.12■■□□□ 1.45
RFFL-206ENST00000447669 PRRT3Q5FWE3 981 aa24.12■■□□□ 1.45
RFFL-206ENST00000447669 TTC23LQ6PF05 361 aa24.12■■□□□ 1.45
RFFL-206ENST00000447669 DDIASQ8IXT1 998 aa24.12■■□□□ 1.45
RFFL-206ENST00000447669 TBC1D21Q8IYX1 336 aa24.12■■□□□ 1.45
RFFL-206ENST00000447669 METTL6Q8TCB7 284 aa24.12■■□□□ 1.45
RFFL-206ENST00000447669 ATL1Q8WXF7 558 aa24.12■■□□□ 1.45
RFFL-206ENST00000447669 LRRC37BQ96QE4 947 aa24.12■■□□□ 1.45
RFFL-206ENST00000447669 FARSBQ9NSD9 589 aaKnown RBP24.12■■□□□ 1.45
RFFL-206ENST00000447669 APOBEC2Q9Y235 224 aaKnown RBP24.12■■□□□ 1.45
RFFL-206ENST00000447669 E7EQ34 232 aa24.11■■□□□ 1.45
RFFL-206ENST00000447669 HOXA6P31267 233 aa24.11■■□□□ 1.45
RFFL-206ENST00000447669 ILF3Q12906 894 aaKnown RBP eCLIP24.11■■□□□ 1.457e-7■■□□□ 13.2
RFFL-206ENST00000447669 LRP8Q14114 963 aa24.11■■□□□ 1.45
RFFL-206ENST00000447669 CCT6BQ92526 530 aa24.11■■□□□ 1.45
RFFL-206ENST00000447669 MTFMTQ96DP5 389 aaKnown RBP24.11■■□□□ 1.45
RFFL-206ENST00000447669 CAMK1GQ96NX5 476 aa24.11■■□□□ 1.45
RFFL-206ENST00000447669 SIKE1Q9BRV8 207 aa24.11■■□□□ 1.45
RFFL-206ENST00000447669 ACAT2Q9BWD1 397 aa24.11■■□□□ 1.45
RFFL-206ENST00000447669 TCF7L2Q9NQB0 619 aa24.11■■□□□ 1.45
RFFL-206ENST00000447669 WDR87Q6ZQQ6 2873 aa24.11■■□□□ 1.45
RFFL-206ENST00000447669 SLCO1B7G3V0H7 640 aa24.11■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms