RNA–Protein interactions for RNA: ENST00000447182.6

SDCBP-204, Transcript of syndecan binding protein, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SDCBP, Length 2,103 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-204ENST00000447182 APOL5Q9BWW9 433 aa18.64■□□□□ 0.57
SDCBP-204ENST00000447182 NACA2Q9H009 215 aa18.64■□□□□ 0.57
SDCBP-204ENST00000447182 RMND5AQ9H871 391 aa18.64■□□□□ 0.57
SDCBP-204ENST00000447182 ERVK-18Q9QC07 812 aa18.64■□□□□ 0.57
SDCBP-204ENST00000447182 LHX3Q9UBR4 397 aa18.64■□□□□ 0.57
SDCBP-204ENST00000447182 SAMD4AQ9UPU9 718 aaKnown RBP18.64■□□□□ 0.57
SDCBP-204ENST00000447182 PCDHB9Q9Y5E1 797 aa18.64■□□□□ 0.57
SDCBP-204ENST00000447182 GAPDHSO14556 408 aaPredicted RBP18.63■□□□□ 0.57
SDCBP-204ENST00000447182 MITFO75030 526 aaPredicted RBP18.63■□□□□ 0.57
SDCBP-204ENST00000447182 SLC25A14O95258 325 aaPredicted RBP18.63■□□□□ 0.57
SDCBP-204ENST00000447182 CCNDBP1O95273 360 aa18.63■□□□□ 0.57
SDCBP-204ENST00000447182 EPB42P16452 691 aa18.63■□□□□ 0.57
SDCBP-204ENST00000447182 PCSK2P16519 638 aa18.63■□□□□ 0.57
SDCBP-204ENST00000447182 GRK3P35626 688 aa18.63■□□□□ 0.57
SDCBP-204ENST00000447182 RPS14P62263 151 aaKnown RBP18.63■□□□□ 0.57
SDCBP-204ENST00000447182 TWF1Q12792 350 aa18.63■□□□□ 0.57
SDCBP-204ENST00000447182 DUSP4Q13115 394 aa18.63■□□□□ 0.57
SDCBP-204ENST00000447182 KDM4DQ6B0I6 523 aa18.63■□□□□ 0.57
SDCBP-204ENST00000447182 RSPO2Q6UXX9 243 aaPredicted RBP18.63■□□□□ 0.57
SDCBP-204ENST00000447182 P2RY8Q86VZ1 359 aa18.63■□□□□ 0.57
SDCBP-204ENST00000447182 FAM9CQ8IZT9 166 aa18.63■□□□□ 0.57
SDCBP-204ENST00000447182 ELMOD1Q8N336 334 aa18.63■□□□□ 0.57
SDCBP-204ENST00000447182 DYNC2LI1Q8TCX1 351 aa18.63■□□□□ 0.57
SDCBP-204ENST00000447182 PHF10Q8WUB8 498 aaKnown RBP18.63■□□□□ 0.57
SDCBP-204ENST00000447182 BOCQ9BWV1 1114 aa18.63■□□□□ 0.57
SDCBP-204ENST00000447182 ATP13A3Q9H7F0 1226 aa18.63■□□□□ 0.57
SDCBP-204ENST00000447182 SCN3BQ9NY72 215 aa18.63■□□□□ 0.57
SDCBP-204ENST00000447182 PRAMEF1O95521 474 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 KLKB1P03952 638 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 ITGB6P18564 788 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 ATF6P18850 670 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 S100A3P33764 101 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 GGT5P36269 586 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 MAGEA10P43363 369 aaPredicted RBP18.62■□□□□ 0.57
SDCBP-204ENST00000447182 MVKQ03426 396 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 KCNA10Q16322 511 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 TTLL9Q3SXZ7 439 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 INO80DQ53TQ3 878 aaPredicted RBP18.62■□□□□ 0.57
SDCBP-204ENST00000447182 CARD16Q5EG05 197 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 SGO1Q5FBB7 561 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 GPRC6AQ5T6X5 926 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 ZBTB2Q8N680 514 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 OR6Q1Q8NGQ2 317 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 CLHC1Q8NHS4 586 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 NDNFQ8TB73 568 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 C2orf15Q8WU43 125 aaKnown RBP18.62■□□□□ 0.57
SDCBP-204ENST00000447182 ULK4Q96C45 1275 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 TM9SF3Q9HD45 589 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 IL1RAPQ9NPH3 570 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 TRMT13Q9NUP7 481 aaKnown RBP18.62■□□□□ 0.57
SDCBP-204ENST00000447182 ITGB1BP2Q9UKP3 347 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 PRSS21Q9Y6M0 314 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 CENPFP49454 3210 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 TMEM247A6NEH6 219 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 GJB5O95377 273 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 KRT6AP02538 564 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 KRT6BP04259 564 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 PRPS2P11908 318 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 TGM1P22735 817 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 FSHRP23945 695 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 RXRGP48443 463 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 KRT6CP48668 564 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 CLK3P49761 638 aaKnown RBP18.62■□□□□ 0.57
SDCBP-204ENST00000447182 DAPP51397 102 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 IFITM3Q01628 133 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 CLCA4Q14CN2 919 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 OR2T5Q6IEZ7 315 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 FAM151BQ6UXP7 276 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 LINGO4Q6UY18 593 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 PGBD3Q8N328 593 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 OR2T29Q8NH02 315 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 TESCQ96BS2 214 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 ACPTQ9BZG2 426 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 PMF1-BGLAPU3KQ54 211 aa18.62■□□□□ 0.57
SDCBP-204ENST00000447182 TRBV5-4A0A0C4DH59 114 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 TOR1BO14657 336 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 TSPAN3O60637 253 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 NADKO95544 446 aaPredicted RBP18.61■□□□□ 0.57
SDCBP-204ENST00000447182 FMO3P31513 532 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 CA5AP35218 305 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 ARHGDIAP52565 204 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 GBX1Q14549 363 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 PERM1Q5SV97 790 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 TTC23LQ6PF05 361 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 ZNF783Q6ZMS7 281 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 PRSS48Q7RTY5 328 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 GALNT5Q7Z7M9 940 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 SVOPQ8N4V2 548 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 GLMNQ92990 594 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 HHIPQ96QV1 700 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 PARVBQ9HBI1 364 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 CCNB1IP1Q9NPC3 277 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 DNMT3BQ9UBC3 853 aaKnown RBP18.61■□□□□ 0.57
SDCBP-204ENST00000447182 DLGAP4Q9Y2H0 992 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 TRIM17Q9Y577 477 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 MICAL3Q7RTP6 2002 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 H0Y626 953 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 SEPT4O43236 478 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 STK16O75716 305 aa18.61■□□□□ 0.57
SDCBP-204ENST00000447182 STC2O76061 302 aa18.61■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms