RNA–Protein interactions for RNA: ENST00000444983.6

CCNE1-203, Transcript of cyclin E1, humanhuman

TSL 1 (best) BASIC

Gene CCNE1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-203ENST00000444983 SIGLEC6O43699 453 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 TRIM13O60858 407 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 ALPPL2P10696 532 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 FGF3P11487 239 aaPredicted RBP14.65□□□□□ -0.06
CCNE1-203ENST00000444983 GFAPP14136 432 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 PKLRP30613 574 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 HSD17B2P37059 387 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 AGTR2P50052 363 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 HERVK_113P63132 956 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 NR1D2Q14995 579 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 LIPMQ5VYY2 423 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 METTL2BQ6P1Q9 378 aaKnown RBP14.65□□□□□ -0.06
CCNE1-203ENST00000444983 PRR23CQ6ZRP0 262 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 PTGR2Q8N8N7 351 aaPredicted RBP14.65□□□□□ -0.06
CCNE1-203ENST00000444983 FAM76AQ8TAV0 307 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 MGARPQ8TDB4 240 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 ATL1Q8WXF7 558 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 APOLD1Q96LR9 279 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 IL17FQ96PD4 163 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 TMEM237Q96Q45 408 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 PHOX2BQ99453 314 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 EGFL8Q99944 293 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 ERVK-6Q9BXR3 956 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 RIF1Q5UIP0 2472 aaKnown RBP14.65□□□□□ -0.06
CCNE1-203ENST00000444983 SIX3O95343 332 aaPredicted RBP14.65□□□□□ -0.06
CCNE1-203ENST00000444983 RPS17P08708 135 aaKnown RBP14.65□□□□□ -0.06
CCNE1-203ENST00000444983 GLB1P16278 677 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 PNLIPRP1P54315 467 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 NHLH1Q02575 133 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 FASTKQ14296 549 aaKnown RBP14.65□□□□□ -0.06
CCNE1-203ENST00000444983 KRT33BQ14525 404 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 SUZ12Q15022 739 aaKnown RBP14.65□□□□□ -0.06
CCNE1-203ENST00000444983 PROX2Q3B8N5 592 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 FBXO48Q5FWF7 155 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 ZNF678Q5SXM1 525 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 HHATQ5VTY9 493 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 CES4AQ5XG92 561 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 ANKS6Q68DC2 871 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 TRIM48Q8IWZ4 208 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 EID2Q8N6I1 236 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 OR2L8Q8NGY9 312 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 ESAMQ96AP7 390 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 RAB11FIP5Q9BXF6 653 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 CD244Q9BZW8 370 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 ATG10Q9H0Y0 220 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 INTS9Q9NV88 658 aaKnown RBP14.65□□□□□ -0.06
CCNE1-203ENST00000444983 INTS7Q9NVH2 962 aaKnown RBP14.65□□□□□ -0.06
CCNE1-203ENST00000444983 NCKIPSDQ9NZQ3 722 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 BTBD3Q9Y2F9 522 aa14.65□□□□□ -0.06
CCNE1-203ENST00000444983 PCM1Q15154 2024 aa14.64□□□□□ -0.07
CCNE1-203ENST00000444983 A0A1W2PPV9 198 aa14.64□□□□□ -0.07
CCNE1-203ENST00000444983 LRRC14BA6NHZ5 514 aa14.64□□□□□ -0.07
CCNE1-203ENST00000444983 E2F3O00716 465 aa14.64□□□□□ -0.07
CCNE1-203ENST00000444983 PRICKLE3O43900 615 aaPredicted RBP14.64□□□□□ -0.07
CCNE1-203ENST00000444983 KDM1AO60341 852 aa14.64□□□□□ -0.07
CCNE1-203ENST00000444983 CD59P13987 128 aa14.64□□□□□ -0.07
CCNE1-203ENST00000444983 SHMT2P34897 504 aa14.64□□□□□ -0.07
CCNE1-203ENST00000444983 GDF5P43026 501 aa14.64□□□□□ -0.07
CCNE1-203ENST00000444983 PTCHD3Q3KNS1 767 aa14.64□□□□□ -0.07
CCNE1-203ENST00000444983 UNC50Q53HI1 259 aa14.64□□□□□ -0.07
CCNE1-203ENST00000444983 NUDCD3Q8IVD9 361 aa14.64□□□□□ -0.07
CCNE1-203ENST00000444983 ADGRF3Q8IZF5 1079 aa14.64□□□□□ -0.07
CCNE1-203ENST00000444983 LMNTD1Q8N9Z9 388 aa14.64□□□□□ -0.07
CCNE1-203ENST00000444983 MOCOSQ96EN8 888 aa14.64□□□□□ -0.07
CCNE1-203ENST00000444983 EDEM2Q9BV94 578 aa14.64□□□□□ -0.07
CCNE1-203ENST00000444983 GATA5Q9BWX5 397 aaPredicted RBP14.64□□□□□ -0.07
CCNE1-203ENST00000444983 SGPP1Q9BX95 441 aa14.64□□□□□ -0.07
CCNE1-203ENST00000444983 XKR8Q9H6D3 395 aa14.64□□□□□ -0.07
CCNE1-203ENST00000444983 TMEM9BQ9NQ34 198 aa14.64□□□□□ -0.07
CCNE1-203ENST00000444983 OR6C2Q9NZP2 312 aa14.64□□□□□ -0.07
CCNE1-203ENST00000444983 LNPEPQ9UIQ6 1025 aa14.64□□□□□ -0.07
CCNE1-203ENST00000444983 PADI4Q9UM07 663 aa14.64□□□□□ -0.07
CCNE1-203ENST00000444983 TNPO3Q9Y5L0 923 aaKnown RBP14.64□□□□□ -0.07
CCNE1-203ENST00000444983 RNF215Q9Y6U7 377 aa14.64□□□□□ -0.07
CCNE1-203ENST00000444983 WDR91A4D1P6 747 aa14.63□□□□□ -0.07
CCNE1-203ENST00000444983 FAM221BA6H8Z2 402 aa14.63□□□□□ -0.07
CCNE1-203ENST00000444983 PABPN1LA6NDY0 278 aaKnown RBP14.63□□□□□ -0.07
CCNE1-203ENST00000444983 LILRA5A6NI73 299 aa14.63□□□□□ -0.07
CCNE1-203ENST00000444983 FLRT2O43155 660 aa14.63□□□□□ -0.07
CCNE1-203ENST00000444983 FOXD2O60548 495 aaPredicted RBP14.63□□□□□ -0.07
CCNE1-203ENST00000444983 STK16O75716 305 aa14.63□□□□□ -0.07
CCNE1-203ENST00000444983 S100BP04271 92 aaPredicted RBP14.63□□□□□ -0.07
CCNE1-203ENST00000444983 PNLIPP16233 465 aa14.63□□□□□ -0.07
CCNE1-203ENST00000444983 GRK6P43250 576 aa14.63□□□□□ -0.07
CCNE1-203ENST00000444983 HSPA7P48741 367 aa14.63□□□□□ -0.07
CCNE1-203ENST00000444983 NAGLUP54802 743 aa14.63□□□□□ -0.07
CCNE1-203ENST00000444983 ATG14Q6ZNE5 492 aa14.63□□□□□ -0.07
CCNE1-203ENST00000444983 AMIGO1Q86WK6 493 aa14.63□□□□□ -0.07
CCNE1-203ENST00000444983 PPFIBP2Q8ND30 876 aa14.63□□□□□ -0.07
CCNE1-203ENST00000444983 OR4E2Q8NGC2 313 aa14.63□□□□□ -0.07
CCNE1-203ENST00000444983 LCN9Q8WX39 176 aa14.63□□□□□ -0.07
CCNE1-203ENST00000444983 SH3KBP1Q96B97 665 aa14.63□□□□□ -0.07
CCNE1-203ENST00000444983 PYCR2Q96C36 320 aa14.63□□□□□ -0.07
CCNE1-203ENST00000444983 OR4K3Q96R72 315 aa14.63□□□□□ -0.07
CCNE1-203ENST00000444983 PAIP2Q9BPZ3 127 aaKnown RBP14.63□□□□□ -0.07
CCNE1-203ENST00000444983 LDHAL6BQ9BYZ2 381 aaPredicted RBP14.63□□□□□ -0.07
CCNE1-203ENST00000444983 PITPNM3Q9BZ71 974 aa14.63□□□□□ -0.07
CCNE1-203ENST00000444983 LRIT1Q9P2V4 623 aa14.63□□□□□ -0.07
CCNE1-203ENST00000444983 PCTPQ9UKL6 214 aa14.63□□□□□ -0.07
CCNE1-203ENST00000444983 ASXL3Q9C0F0 2248 aa14.63□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms