RNA–Protein interactions for RNA: ENST00000444315.6

TSPAN9-204, Transcript of tetraspanin 9, humanhuman

TSL 4

Gene TSPAN9, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9-204ENST00000444315 ZNF843Q8N446 348 aa16.18■□□□□ 0.18
TSPAN9-204ENST00000444315 OR2L8Q8NGY9 312 aa16.18■□□□□ 0.18
TSPAN9-204ENST00000444315 SEC14L1Q92503 715 aa16.18■□□□□ 0.18
TSPAN9-204ENST00000444315 BIRC8Q96P09 236 aa16.18■□□□□ 0.18
TSPAN9-204ENST00000444315 TRIM51Q9BSJ1 452 aa16.18■□□□□ 0.18
TSPAN9-204ENST00000444315 NAT9Q9BTE0 207 aa16.18■□□□□ 0.18
TSPAN9-204ENST00000444315 PCYOX1Q9UHG3 505 aa16.18■□□□□ 0.18
TSPAN9-204ENST00000444315 SNX7Q9UNH6 387 aa16.18■□□□□ 0.18
TSPAN9-204ENST00000444315 POLHQ9Y253 713 aa16.18■□□□□ 0.18
TSPAN9-204ENST00000444315 MAN2B2Q9Y2E5 1009 aa16.18■□□□□ 0.18
TSPAN9-204ENST00000444315 NDC80O14777 642 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 TTI1O43156 1089 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 ZNF749O43361 778 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 BANF1O75531 89 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 CREG1O75629 220 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 C1orf105O95561 183 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 MAGP20916 626 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 F8A1P23610 371 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 OAS2P29728 719 aaKnown RBP16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 ARL4CP56559 192 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 RPS18P62269 152 aaKnown RBP16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 MPP1Q00013 466 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 GPS2Q13227 327 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 KCNAB2Q13303 367 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 CUL1Q13616 776 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 CRYMQ14894 314 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 MORF4L2Q15014 288 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 KLHL38Q2WGJ6 581 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 LINC00303Q3SY05 128 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 SPANXN3Q5MJ09 141 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 UGT3A1Q6NUS8 523 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 CENPUQ71F23 418 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 TMEM135Q86UB9 458 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 FAM20CQ8IXL6 584 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 PALM2Q8IXS6 379 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 SYTL1Q8IYJ3 562 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 LMNTD1Q8N9Z9 388 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 APOBEC4Q8WW27 367 aaKnown RBP16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 SNF8Q96H20 258 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 KRT12Q99456 494 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 NDC1Q9BTX1 674 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 GPR87Q9BY21 358 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 SEMA4CQ9C0C4 833 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 CHST8Q9H2A9 424 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 RNF14Q9UBS8 474 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 NDOR1Q9UHB4 597 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 TRMT6Q9UJA5 497 aaKnown RBP16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 FBXO5Q9UKT4 447 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 PLCL2Q9UPR0 1127 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 CHMP2BQ9UQN3 213 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 KLHL20Q9Y2M5 609 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 COMMD10Q9Y6G5 202 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 AP1M2Q9Y6Q5 423 aa16.17■□□□□ 0.18
TSPAN9-204ENST00000444315 ZNF839A8K0R7 811 aa16.16■□□□□ 0.18
TSPAN9-204ENST00000444315 EFCAB8A8MWE9 144 aa16.16■□□□□ 0.18
TSPAN9-204ENST00000444315 MEN1O00255 615 aa16.16■□□□□ 0.18
TSPAN9-204ENST00000444315 ERVK-10P10266 1014 aa16.16■□□□□ 0.18
TSPAN9-204ENST00000444315 PTPN4P29074 926 aa16.16■□□□□ 0.18
TSPAN9-204ENST00000444315 ATP5DP30049 168 aa16.16■□□□□ 0.18
TSPAN9-204ENST00000444315 RPA3P35244 121 aaPredicted RBP16.16■□□□□ 0.18
TSPAN9-204ENST00000444315 ADARP55265 1226 aaKnown RBP16.16■□□□□ 0.18
TSPAN9-204ENST00000444315 HIF1AQ16665 826 aa16.16■□□□□ 0.18
TSPAN9-204ENST00000444315 PTCHD3Q3KNS1 767 aa16.16■□□□□ 0.18
TSPAN9-204ENST00000444315 ACSBG2Q5FVE4 666 aa16.16■□□□□ 0.18
TSPAN9-204ENST00000444315 ZNF789Q5FWF6 425 aa16.16■□□□□ 0.18
TSPAN9-204ENST00000444315 THEMIS2Q5TEJ8 643 aa16.16■□□□□ 0.18
TSPAN9-204ENST00000444315 C1orf189Q5VU69 101 aa16.16■□□□□ 0.18
TSPAN9-204ENST00000444315 CREG2Q8IUH2 290 aa16.16■□□□□ 0.18
TSPAN9-204ENST00000444315 ZNF655Q8N720 491 aaPredicted RBP16.16■□□□□ 0.18
TSPAN9-204ENST00000444315 EXD3Q8N9H8 876 aa16.16■□□□□ 0.18
TSPAN9-204ENST00000444315 SIGLEC10Q96LC7 697 aa16.16■□□□□ 0.18
TSPAN9-204ENST00000444315 MIPEPQ99797 713 aa16.16■□□□□ 0.18
TSPAN9-204ENST00000444315 EBNA1BP2Q99848 306 aaKnown RBP16.16■□□□□ 0.18
TSPAN9-204ENST00000444315 SPATA7Q9P0W8 599 aa16.16■□□□□ 0.18
TSPAN9-204ENST00000444315 ZC3H7BQ9UGR2 993 aaKnown RBP16.16■□□□□ 0.18
TSPAN9-204ENST00000444315 FARSAQ9Y285 508 aaKnown RBP16.16■□□□□ 0.18
TSPAN9-204ENST00000444315 PADI2Q9Y2J8 665 aa16.16■□□□□ 0.18
TSPAN9-204ENST00000444315 FAM169AQ9Y6X4 670 aa16.16■□□□□ 0.18
TSPAN9-204ENST00000444315 SNRNP200O75643 2136 aaKnown RBP16.16■□□□□ 0.18
TSPAN9-204ENST00000444315 ZCWPW2A0A1B0GU75 182 aa16.15■□□□□ 0.18
TSPAN9-204ENST00000444315 SMAPO00193 183 aa16.15■□□□□ 0.18
TSPAN9-204ENST00000444315 ZSCAN9O15535 394 aaPredicted RBP16.15■□□□□ 0.18
TSPAN9-204ENST00000444315 C1QL1O75973 258 aa16.15■□□□□ 0.18
TSPAN9-204ENST00000444315 CMPK1P30085 196 aa16.15■□□□□ 0.18
TSPAN9-204ENST00000444315 PEBP1P30086 187 aaKnown RBP16.15■□□□□ 0.18
TSPAN9-204ENST00000444315 PTGIRP43119 386 aa16.15■□□□□ 0.18
TSPAN9-204ENST00000444315 MAGEA3P43357 314 aa16.15■□□□□ 0.18
TSPAN9-204ENST00000444315 RGS4P49798 205 aa16.15■□□□□ 0.18
TSPAN9-204ENST00000444315 ITGA8P53708 1063 aa16.15■□□□□ 0.18
TSPAN9-204ENST00000444315 CALCOCO2Q13137 446 aa16.15■□□□□ 0.18
TSPAN9-204ENST00000444315 ZC3H12BQ5HYM0 836 aaKnown RBP16.15■□□□□ 0.18
TSPAN9-204ENST00000444315 MLIPQ5VWP3 458 aa16.15■□□□□ 0.18
TSPAN9-204ENST00000444315 SYVN1Q86TM6 617 aa16.15■□□□□ 0.18
TSPAN9-204ENST00000444315 DSELQ8IZU8 1212 aa16.15■□□□□ 0.18
TSPAN9-204ENST00000444315 ENDOVQ8N8Q3 282 aaKnown RBP16.15■□□□□ 0.18
TSPAN9-204ENST00000444315 TTC29Q8NA56 475 aaPredicted RBP16.15■□□□□ 0.18
TSPAN9-204ENST00000444315 C9orf43Q8TAL5 461 aaPredicted RBP16.15■□□□□ 0.18
TSPAN9-204ENST00000444315 DLG3Q92796 817 aa16.15■□□□□ 0.18
TSPAN9-204ENST00000444315 INPP5DQ92835 1189 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms