RNA–Protein interactions for RNA: ENST00000443016.1

USP6NL-203, Transcript of USP6 N-terminal like, humanhuman

TSL 2

Gene USP6NL, Length 2,491 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-203ENST00000443016 ITIH4Q14624 930 aa8.5□□□□□ -1.05
USP6NL-203ENST00000443016 SLMAPQ14BN4 828 aa8.5□□□□□ -1.05
USP6NL-203ENST00000443016 DEFB109BQ30KR1 87 aa8.5□□□□□ -1.05
USP6NL-203ENST00000443016 FBXO38Q6PIJ6 1188 aa8.5□□□□□ -1.05
USP6NL-203ENST00000443016 ZDHHC24Q6UX98 284 aa8.5□□□□□ -1.05
USP6NL-203ENST00000443016 CERS6Q6ZMG9 384 aa8.5□□□□□ -1.05
USP6NL-203ENST00000443016 CCDC25Q86WR0 208 aa8.5□□□□□ -1.05
USP6NL-203ENST00000443016 APOBEC4Q8WW27 367 aaKnown RBP8.5□□□□□ -1.05
USP6NL-203ENST00000443016 OR52A5Q9H2C5 316 aa8.5□□□□□ -1.05
USP6NL-203ENST00000443016 MVB12BQ9H7P6 319 aa8.5□□□□□ -1.05
USP6NL-203ENST00000443016 ZDHHC18Q9NUE0 388 aa8.5□□□□□ -1.05
USP6NL-203ENST00000443016 MRPS18BQ9Y676 258 aaKnown RBP8.5□□□□□ -1.05
USP6NL-203ENST00000443016 BSNQ9UPA5 3926 aa8.5□□□□□ -1.05
USP6NL-203ENST00000443016 PIPSLA2A3N6 862 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 SLC9B1P1A6NJY1 282 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 GOLGA8MH3BSY2 632 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 LIN7AO14910 233 aaPredicted RBP8.49□□□□□ -1.05
USP6NL-203ENST00000443016 SCRG1O75711 98 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 TIAF1O95411 115 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 GSTM1P09488 218 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 CD151P48509 253 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 KPNA2P52292 529 aaKnown RBP8.49□□□□□ -1.05
USP6NL-203ENST00000443016 NFKB2Q00653 900 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 GSTM4Q03013 218 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 KCNAB2Q13303 367 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 FASTKD1Q53R41 847 aaKnown RBP8.49□□□□□ -1.05
USP6NL-203ENST00000443016 ATP1A1-AS1Q5TC04 95 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 ANKRD22Q5VYY1 191 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 AFTPHQ6ULP2 937 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 NLRP9Q7RTR0 991 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 AMIGO1Q86WK6 493 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 THNSL2Q86YJ6 484 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 PPHLN1Q8NEY8 458 aaKnown RBP8.49□□□□□ -1.05
USP6NL-203ENST00000443016 OR52E1Q8NGJ3 308 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 N4BP2L2Q92802 583 aaPredicted RBP8.49□□□□□ -1.05
USP6NL-203ENST00000443016 LRRC39Q96DD0 335 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 PPM1MQ96MI6 270 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 SERPINB12Q96P63 405 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 FCRL4Q96PJ5 515 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 SLC7A5P2Q9GIP4 190 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 ADNPQ9H2P0 1102 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 LHX9Q9NQ69 397 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 C1GALT1Q9NS00 363 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 BFARQ9NZS9 450 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 SAMD15Q9P1V8 674 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 SEMA5BQ9P283 1151 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 POLG2Q9UHN1 485 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 TDRKHQ9Y2W6 561 aaKnown RBP8.49□□□□□ -1.05
USP6NL-203ENST00000443016 NDUFB5O43674 189 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 GOT2P00505 430 aaKnown RBP8.49□□□□□ -1.05
USP6NL-203ENST00000443016 KLK3P07288 261 aaPredicted RBP8.49□□□□□ -1.05
USP6NL-203ENST00000443016 F8A1P23610 371 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 OAS2P29728 719 aaKnown RBP8.49□□□□□ -1.05
USP6NL-203ENST00000443016 CSE1LP55060 971 aaKnown RBP8.49□□□□□ -1.05
USP6NL-203ENST00000443016 SESN2P58004 480 aaPredicted RBP8.49□□□□□ -1.05
USP6NL-203ENST00000443016 GPR19Q15760 415 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 KCTD19Q17RG1 926 aaPredicted RBP8.49□□□□□ -1.05
USP6NL-203ENST00000443016 TSTD2Q5T7W7 516 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 LYPLAL1Q5VWZ2 237 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 LRRC8BQ6P9F7 803 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 NAPRTQ6XQN6 538 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 GSPT2Q8IYD1 628 aaKnown RBP8.49□□□□□ -1.05
USP6NL-203ENST00000443016 CARFQ8N187 725 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 D2HGDHQ8N465 521 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 TEX19Q8NA77 164 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 OR13J1Q8NGT2 312 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 OR4L1Q8NH43 312 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 ZNF778Q96MU6 729 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 NAT9Q9BTE0 207 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 XKR8Q9H6D3 395 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 STARD5Q9NSY2 213 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 SLC2A6Q9UGQ3 507 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 POMT2Q9UKY4 750 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 PRSS21Q9Y6M0 314 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 FLNCQ14315 2725 aa8.49□□□□□ -1.05
USP6NL-203ENST00000443016 HECTD1Q9ULT8 2610 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 C2orf74A8MZ97 194 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 PYCARD-AS1I3L0S3 204 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 KDM1AO60341 852 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 OR1I1O60431 355 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 CPNE3O75131 537 aaKnown RBP8.48□□□□□ -1.05
USP6NL-203ENST00000443016 ZIC2O95409 532 aaPredicted RBP8.48□□□□□ -1.05
USP6NL-203ENST00000443016 ITGB6P18564 788 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 PRDX3P30048 256 aaKnown RBP8.48□□□□□ -1.05
USP6NL-203ENST00000443016 ECHS1P30084 290 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 FOXN2P32314 431 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 RPS15P62841 145 aaKnown RBP8.48□□□□□ -1.05
USP6NL-203ENST00000443016 PLOD1Q02809 727 aaPredicted RBP8.48□□□□□ -1.05
USP6NL-203ENST00000443016 DNASE1L3Q13609 305 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 TRADDQ15628 312 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 BBS9Q3SYG4 887 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 FAM199XQ6PEV8 388 aaPredicted RBP8.48□□□□□ -1.05
USP6NL-203ENST00000443016 PACS1Q6VY07 963 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 PTRH1Q86Y79 214 aaKnown RBP8.48□□□□□ -1.05
USP6NL-203ENST00000443016 OTUD6BQ8N6M0 293 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 CLIP3Q96DZ5 547 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 TSSK1BQ9BXA7 367 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 IL22Q9GZX6 179 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 TWSG1Q9GZX9 223 aa8.48□□□□□ -1.05
USP6NL-203ENST00000443016 KLHL25Q9H0H3 589 aa8.48□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms