RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 PYURFQ96I23 114 aa19.83■□□□□ 0.77
SHOX2-203ENST00000441443 TMEM246Q9BRR3 403 aa19.83■□□□□ 0.77
SHOX2-203ENST00000441443 NUAK2Q9H093 628 aa19.83■□□□□ 0.77
SHOX2-203ENST00000441443 SARS2Q9NP81 518 aaKnown RBP19.83■□□□□ 0.77
SHOX2-203ENST00000441443 hCG_2039718K7EN88 272 aa19.83■□□□□ 0.76
SHOX2-203ENST00000441443 APOA1P02647 267 aa19.83■□□□□ 0.76
SHOX2-203ENST00000441443 ZNF45Q02386 682 aa19.83■□□□□ 0.76
SHOX2-203ENST00000441443 GALNT10Q86SR1 603 aa19.83■□□□□ 0.76
SHOX2-203ENST00000441443 ARRDC2Q8TBH0 407 aa19.83■□□□□ 0.76
SHOX2-203ENST00000441443 Q96MT0 163 aa19.83■□□□□ 0.76
SHOX2-203ENST00000441443 DEPDC7Q96QD5 511 aa19.83■□□□□ 0.76
SHOX2-203ENST00000441443 PCDHGA12O60330 932 aa19.82■□□□□ 0.76
SHOX2-203ENST00000441443 NIPSNAP2O75323 286 aa19.82■□□□□ 0.76
SHOX2-203ENST00000441443 WBP4O75554 376 aaKnown RBP19.82■□□□□ 0.76
SHOX2-203ENST00000441443 IGLV3-25P01717 112 aa19.82■□□□□ 0.76
SHOX2-203ENST00000441443 HOXA9P31269 272 aa19.82■□□□□ 0.76
SHOX2-203ENST00000441443 CTSKP43235 329 aa19.82■□□□□ 0.76
SHOX2-203ENST00000441443 PPP3CCP48454 512 aa19.82■□□□□ 0.76
SHOX2-203ENST00000441443 KEAP1Q14145 624 aa19.82■□□□□ 0.76
SHOX2-203ENST00000441443 PTPRNQ16849 979 aa19.82■□□□□ 0.76
SHOX2-203ENST00000441443 ZFP69Q49AA0 526 aa19.82■□□□□ 0.76
SHOX2-203ENST00000441443 AGMOQ6ZNB7 445 aa19.82■□□□□ 0.76
SHOX2-203ENST00000441443 BEND7Q8N7W2 519 aaPredicted RBP19.82■□□□□ 0.76
SHOX2-203ENST00000441443 OR4F6Q8NGB9 312 aa19.82■□□□□ 0.76
SHOX2-203ENST00000441443 DNASE1L2Q92874 299 aa19.82■□□□□ 0.76
SHOX2-203ENST00000441443 SEMA3CQ99985 751 aa19.82■□□□□ 0.76
SHOX2-203ENST00000441443 TTYH2Q9BSA4 534 aa19.82■□□□□ 0.76
SHOX2-203ENST00000441443 ERVK13-1Q9NX77 482 aa19.82■□□□□ 0.76
SHOX2-203ENST00000441443 PDP1Q9P0J1 537 aaPredicted RBP19.82■□□□□ 0.76
SHOX2-203ENST00000441443 TSPAN3O60637 253 aa19.82■□□□□ 0.76
SHOX2-203ENST00000441443 MED26O95402 600 aa19.82■□□□□ 0.76
SHOX2-203ENST00000441443 HOXB8P17481 243 aaPredicted RBP19.82■□□□□ 0.76
SHOX2-203ENST00000441443 CACNB2Q08289 660 aaPredicted RBP19.82■□□□□ 0.76
SHOX2-203ENST00000441443 GPR150Q8NGU9 434 aa19.82■□□□□ 0.76
SHOX2-203ENST00000441443 FAM120BQ96EK7 910 aaKnown RBP19.82■□□□□ 0.76
SHOX2-203ENST00000441443 ZNF382Q96SR6 550 aa19.82■□□□□ 0.76
SHOX2-203ENST00000441443 ZBTB18Q99592 522 aa19.82■□□□□ 0.76
SHOX2-203ENST00000441443 C1QTNF3Q9BXJ4 246 aa19.82■□□□□ 0.76
SHOX2-203ENST00000441443 OR51E2Q9H255 320 aa19.82■□□□□ 0.76
SHOX2-203ENST00000441443 CCNB1IP1Q9NPC3 277 aa19.82■□□□□ 0.76
SHOX2-203ENST00000441443 DKK3Q9UBP4 350 aa19.82■□□□□ 0.76
SHOX2-203ENST00000441443 FFAR3O14843 346 aa19.81■□□□□ 0.76
SHOX2-203ENST00000441443 GPR42O15529 346 aa19.81■□□□□ 0.76
SHOX2-203ENST00000441443 RETP07949 1114 aa19.81■□□□□ 0.76
SHOX2-203ENST00000441443 DEFA1P59665 94 aa19.81■□□□□ 0.76
SHOX2-203ENST00000441443 DEFA3P59666 94 aa19.81■□□□□ 0.76
SHOX2-203ENST00000441443 TIGD6Q17RP2 521 aa19.81■□□□□ 0.76
SHOX2-203ENST00000441443 BCL7AQ4VC05 210 aa19.81■□□□□ 0.76
SHOX2-203ENST00000441443 CDKN2AIPNLQ96HQ2 116 aa19.81■□□□□ 0.76
SHOX2-203ENST00000441443 CCDC177Q9NQR7 707 aaPredicted RBP19.81■□□□□ 0.76
SHOX2-203ENST00000441443 LOC285095A0A1B0GVY8 99 aa19.81■□□□□ 0.76
SHOX2-203ENST00000441443 CCRL2O00421 344 aa19.81■□□□□ 0.76
SHOX2-203ENST00000441443 NDUFS3O75489 264 aa19.81■□□□□ 0.76
SHOX2-203ENST00000441443 B3GALT4O96024 378 aa19.81■□□□□ 0.76
SHOX2-203ENST00000441443 UGT2B10P36537 528 aa19.81■□□□□ 0.76
SHOX2-203ENST00000441443 HMGCS1Q01581 520 aa19.81■□□□□ 0.76
SHOX2-203ENST00000441443 ACVR1Q04771 509 aa19.81■□□□□ 0.76
SHOX2-203ENST00000441443 RUNDC3AQ59EK9 446 aa19.81■□□□□ 0.76
SHOX2-203ENST00000441443 KDM4DQ6B0I6 523 aa19.81■□□□□ 0.76
SHOX2-203ENST00000441443 ZNF544Q6NX49 715 aa19.81■□□□□ 0.76
SHOX2-203ENST00000441443 TTC23LQ6PF05 361 aa19.81■□□□□ 0.76
SHOX2-203ENST00000441443 GALNT12Q8IXK2 581 aa19.81■□□□□ 0.76
SHOX2-203ENST00000441443 LINGO1Q96FE5 620 aa19.81■□□□□ 0.76
SHOX2-203ENST00000441443 ZFYVE19Q96K21 471 aa19.81■□□□□ 0.76
SHOX2-203ENST00000441443 NEDD4LQ96PU5 975 aa19.81■□□□□ 0.76
SHOX2-203ENST00000441443 NDRG4Q9ULP0 352 aaKnown RBP19.81■□□□□ 0.76
SHOX2-203ENST00000441443 WBP11Q9Y2W2 641 aaKnown RBP19.81■□□□□ 0.76
SHOX2-203ENST00000441443 A0A0U1RQS6 177 aa19.81■□□□□ 0.76
SHOX2-203ENST00000441443 CENPXA8MT69 81 aa19.81■□□□□ 0.76
SHOX2-203ENST00000441443 AGRPO00253 132 aa19.81■□□□□ 0.76
SHOX2-203ENST00000441443 PER2O15055 1255 aa19.81■□□□□ 0.76
SHOX2-203ENST00000441443 OR1I1O60431 355 aa19.81■□□□□ 0.76
SHOX2-203ENST00000441443 PGRP06401 933 aa19.81■□□□□ 0.76
SHOX2-203ENST00000441443 LHX1P48742 406 aa19.81■□□□□ 0.76
SHOX2-203ENST00000441443 EIF4EBP2Q13542 120 aaPredicted RBP19.81■□□□□ 0.76
SHOX2-203ENST00000441443 BRMS1LQ5PSV4 323 aa19.81■□□□□ 0.76
SHOX2-203ENST00000441443 ZCCHC8Q6NZY4 707 aaKnown RBP19.81■□□□□ 0.76
SHOX2-203ENST00000441443 Q6ZPB1 254 aaPredicted RBP19.81■□□□□ 0.76
SHOX2-203ENST00000441443 ATG16L2Q8NAA4 619 aa19.81■□□□□ 0.76
SHOX2-203ENST00000441443 TRPV1Q8NER1 839 aa19.81■□□□□ 0.76
SHOX2-203ENST00000441443 SMIM14Q96QK8 99 aa19.81■□□□□ 0.76
SHOX2-203ENST00000441443 COPS4Q9BT78 406 aa19.81■□□□□ 0.76
SHOX2-203ENST00000441443 MAGIXQ9H6Y5 334 aa19.81■□□□□ 0.76
SHOX2-203ENST00000441443 TMLHEQ9NVH6 421 aa19.81■□□□□ 0.76
SHOX2-203ENST00000441443 KLK8O60259 260 aa19.8■□□□□ 0.76
SHOX2-203ENST00000441443 OR4Q2P0C623 313 aa19.8■□□□□ 0.76
SHOX2-203ENST00000441443 NRIP1P48552 1158 aa19.8■□□□□ 0.76
SHOX2-203ENST00000441443 ARHGDIAP52565 204 aa19.8■□□□□ 0.76
SHOX2-203ENST00000441443 PRKCDQ05655 676 aa19.8■□□□□ 0.76
SHOX2-203ENST00000441443 ALFQ53S48 1182 aa19.8■□□□□ 0.76
SHOX2-203ENST00000441443 SGO1Q5FBB7 561 aa19.8■□□□□ 0.76
SHOX2-203ENST00000441443 ANKRD46Q86W74 232 aa19.8■□□□□ 0.76
SHOX2-203ENST00000441443 OR52E6Q96RD3 313 aa19.8■□□□□ 0.76
SHOX2-203ENST00000441443 SNX18Q96RF0 628 aa19.8■□□□□ 0.76
SHOX2-203ENST00000441443 CENPOQ9BU64 300 aa19.8■□□□□ 0.76
SHOX2-203ENST00000441443 DPY30Q9C005 99 aa19.8■□□□□ 0.76
SHOX2-203ENST00000441443 ARHGAP39Q9C0H5 1083 aa19.8■□□□□ 0.76
SHOX2-203ENST00000441443 PAQR5Q9NXK6 330 aaPredicted RBP19.8■□□□□ 0.76
SHOX2-203ENST00000441443 KIF17Q9P2E2 1029 aa19.8■□□□□ 0.76
SHOX2-203ENST00000441443 TRPV2Q9Y5S1 764 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms