RNA–Protein interactions for RNA: ENST00000440835.6

PTPRR-204, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 2,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-204ENST00000440835 PRLP01236 227 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 EPOP01588 193 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 GSTM1P09488 218 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 NELFEP18615 380 aaKnown RBP5.87□□□□□ -1.47
PTPRR-204ENST00000440835 IL1R2P27930 398 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 DLSTP36957 453 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 CYP4F2P78329 520 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 PPIDQ08752 370 aaKnown RBP5.87□□□□□ -1.47
PTPRR-204ENST00000440835 SEMA5AQ13591 1074 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 CYP1B1Q16678 543 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 GSTA3Q16772 222 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 DEFB109BQ30KR1 87 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 TFDP3Q5H9I0 405 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 ZDHHC24Q6UX98 284 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 SPOCD1Q6ZMY3 1216 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 TIPARPQ7Z3E1 657 aaKnown RBP5.87□□□□□ -1.47
PTPRR-204ENST00000440835 SNX32Q86XE0 403 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 PPP1R3BQ86XI6 285 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 EFCAB3Q8N7B9 438 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 ANKRD42Q8N9B4 389 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 NETO2Q8NC67 525 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.87□□□□□ -1.47
PTPRR-204ENST00000440835 HSPH1Q92598 858 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 ZNF75CPQ92670 426 aaPredicted RBP5.87□□□□□ -1.47
PTPRR-204ENST00000440835 GLYATL1Q969I3 302 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 TADA1Q96BN2 335 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 PPP1R14BQ96C90 147 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 SLC41A2Q96JW4 573 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 ZNF184Q99676 751 aaPredicted RBP5.87□□□□□ -1.47
PTPRR-204ENST00000440835 SIKE1Q9BRV8 207 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 CENPKQ9BS16 269 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 ULBP3Q9BZM4 244 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 ZFYVE1Q9HBF4 777 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 MTRF1LQ9UGC7 380 aaKnown RBP5.87□□□□□ -1.47
PTPRR-204ENST00000440835 PCYOX1Q9UHG3 505 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 HTR3EA5X5Y0 456 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 A8MX80 341 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 DPM1O60762 260 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 B3GALNT1O75752 331 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 IDO1P14902 403 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 AMD1P17707 334 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 CTPS1P17812 591 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 LPOP22079 712 aaPredicted RBP5.87□□□□□ -1.47
PTPRR-204ENST00000440835 NDUFS1P28331 727 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 FOXN2P32314 431 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 COILP38432 576 aaPredicted RBP5.87□□□□□ -1.47
PTPRR-204ENST00000440835 MARCKSL1P49006 195 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 PSMD7P51665 324 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 TAS2R40P59535 323 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 SLC34A1Q06495 639 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 CALCOCO2Q13137 446 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 NFATC2Q13469 925 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 DNASE1L3Q13609 305 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 DPYSL3Q14195 570 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 PDK1Q15118 436 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 LDLRAP1Q5SW96 308 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 TMTC4Q5T4D3 741 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 NCBP2-AS2Q69YL0 99 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 CCDC137Q6PK04 289 aaKnown RBP5.87□□□□□ -1.47
PTPRR-204ENST00000440835 ASB18Q6ZVZ8 466 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 CHST15Q7LFX5 561 aaPredicted RBP5.87□□□□□ -1.47
PTPRR-204ENST00000440835 SATL1Q86VE3 508 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 PATE1Q8WXA2 126 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 SCAMP4Q969E2 229 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 HAUS1Q96CS2 278 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 C17orf62Q9BQA9 187 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 FERMT1Q9BQL6 677 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 SLC25A51Q9H1U9 297 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 TMEM9Q9P0T7 183 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 C5AR2Q9P296 337 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 RARRES3Q9UL19 164 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 R3HDM2Q9Y2K5 976 aaKnown RBP5.87□□□□□ -1.47
PTPRR-204ENST00000440835 ZNF711Q9Y462 761 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 HEBP2Q9Y5Z4 205 aa5.87□□□□□ -1.47
PTPRR-204ENST00000440835 EIF3FO00303 357 aaPredicted RBP5.86□□□□□ -1.47
PTPRR-204ENST00000440835 LSM1O15116 133 aaKnown RBP5.86□□□□□ -1.47
PTPRR-204ENST00000440835 VPS4BO75351 444 aa5.86□□□□□ -1.47
PTPRR-204ENST00000440835 SPAG6O75602 509 aa5.86□□□□□ -1.47
PTPRR-204ENST00000440835 CEACAM4O75871 244 aa5.86□□□□□ -1.47
PTPRR-204ENST00000440835 ATP5HO75947 161 aa5.86□□□□□ -1.47
PTPRR-204ENST00000440835 SLC25A14O95258 325 aaPredicted RBP5.86□□□□□ -1.47
PTPRR-204ENST00000440835 CLDN7O95471 211 aa5.86□□□□□ -1.47
PTPRR-204ENST00000440835 HBQ1P09105 142 aa5.86□□□□□ -1.47
PTPRR-204ENST00000440835 COL6A2P12110 1019 aa5.86□□□□□ -1.47
PTPRR-204ENST00000440835 PPM1FP49593 454 aaPredicted RBP5.86□□□□□ -1.47
PTPRR-204ENST00000440835 PGDP52209 483 aa5.86□□□□□ -1.47
PTPRR-204ENST00000440835 RPS15P62841 145 aaKnown RBP5.86□□□□□ -1.47
PTPRR-204ENST00000440835 CAV1Q03135 178 aa5.86□□□□□ -1.47
PTPRR-204ENST00000440835 TCEA2Q15560 299 aa5.86□□□□□ -1.47
PTPRR-204ENST00000440835 CCNG2Q16589 344 aa5.86□□□□□ -1.47
PTPRR-204ENST00000440835 C10orf62Q5T681 223 aaPredicted RBP5.86□□□□□ -1.47
PTPRR-204ENST00000440835 FHL5Q5TD97 284 aa5.86□□□□□ -1.47
PTPRR-204ENST00000440835 DUPD1Q68J44 220 aa5.86□□□□□ -1.47
PTPRR-204ENST00000440835 KLC3Q6P597 504 aa5.86□□□□□ -1.47
PTPRR-204ENST00000440835 ADGRG6Q86SQ4 1221 aa5.86□□□□□ -1.47
PTPRR-204ENST00000440835 JAZF1Q86VZ6 243 aa5.86□□□□□ -1.47
PTPRR-204ENST00000440835 RFX6Q8HWS3 928 aa5.86□□□□□ -1.47
PTPRR-204ENST00000440835 RASGRP3Q8IV61 690 aa5.86□□□□□ -1.47
PTPRR-204ENST00000440835 SFTPA2Q8IWL1 248 aa5.86□□□□□ -1.47
PTPRR-204ENST00000440835 LPCAT1Q8NF37 534 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms