RNA–Protein interactions for RNA: ENST00000439986.8

CCBE1-202, Transcript of collagen and calcium binding EGF domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCBE1, Length 6,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCBE1-202ENST00000439986 TPRA1Q86W33 373 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 NRSN1Q8IZ57 195 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 FSTL5Q8N475 847 aaPredicted RBP11.38□□□□□ -0.59
CCBE1-202ENST00000439986 TMEM199Q8N511 208 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 MIPEPQ99797 713 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 ADAM19Q9H013 955 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 SGK2Q9HBY8 427 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 ARNT2Q9HBZ2 717 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 SMPD3Q9NY59 655 aaPredicted RBP11.38□□□□□ -0.59
CCBE1-202ENST00000439986 DTLQ9NZJ0 730 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 ARFGEF2Q9Y6D5 1785 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 C9JVG2 144 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 NIPSNAP2O75323 286 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 MATN4O95460 622 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 NADKO95544 446 aaPredicted RBP11.38□□□□□ -0.59
CCBE1-202ENST00000439986 CXCL14O95715 111 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 AFF3P51826 1226 aaKnown RBP11.38□□□□□ -0.59
CCBE1-202ENST00000439986 MPP1Q00013 466 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 SIX1Q15475 284 aaPredicted RBP11.38□□□□□ -0.59
CCBE1-202ENST00000439986 SLC39A4Q6P5W5 647 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 KCNIP4Q6PIL6 250 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 OTOP3Q7RTS5 596 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 LRRC52Q8N7C0 313 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 KBTBD7Q8WVZ9 684 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 HDAC10Q969S8 669 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 LMLNQ96KR4 655 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 PCDHAC1Q9H158 963 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 DSN1Q9H410 356 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 PREBQ9HCU5 417 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 SLC28A1O00337 649 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 TPST2O60704 377 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 DBIP07108 87 aaKnown RBP11.38□□□□□ -0.59
CCBE1-202ENST00000439986 PTPN9P43378 593 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 PSMD5Q16401 504 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 CLEC6AQ6EIG7 209 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 VTCN1Q7Z7D3 282 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 RAVER1Q8IY67 606 aaKnown RBP11.38□□□□□ -0.59
CCBE1-202ENST00000439986 DENND1AQ8TEH3 1009 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 PIH1D2Q8WWB5 315 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 GPER1Q99527 375 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 PRMT8Q9NR22 394 aaPredicted RBP11.38□□□□□ -0.59
CCBE1-202ENST00000439986 ZNF221Q9UK13 617 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 DCLK1O15075 740 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 WNT3AP56704 352 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 MAP4K2Q12851 820 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 DSC3Q14574 896 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 CBX2Q14781 532 aaPredicted RBP11.38□□□□□ -0.59
CCBE1-202ENST00000439986 SEC23BQ15437 767 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 TAB1Q15750 504 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 TYSND1Q2T9J0 566 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 KLHL22Q53GT1 634 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 GPRIN3Q6ZVF9 776 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 RIOX2Q8IUF8 465 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 IGDCC3Q8IVU1 814 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 MTURNQ8N3F0 131 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 KAT2AQ92830 837 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 ZHX1-C8orf76Q96EF9 292 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 OR52B2Q96RD2 323 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 GFOD1Q9NXC2 390 aa11.38□□□□□ -0.59
CCBE1-202ENST00000439986 AP1G1O43747 822 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 MLYCDO95822 493 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 OAS1P00973 400 aaKnown RBP11.37□□□□□ -0.59
CCBE1-202ENST00000439986 SLC35G4P0C7Q5 338 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 IVDP26440 423 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 CASP9P55211 416 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 RAB5BP61020 215 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 MERTKQ12866 999 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.37□□□□□ -0.59
CCBE1-202ENST00000439986 FIBCD1Q8N539 461 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 NKAPQ8N5F7 415 aaKnown RBP11.37□□□□□ -0.59
CCBE1-202ENST00000439986 S100ZQ8WXG8 99 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 OR52E6Q96RD3 313 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 NIFKQ9BYG3 293 aaKnown RBP11.37□□□□□ -0.59
CCBE1-202ENST00000439986 MTG2Q9H4K7 406 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 ZNF230Q9UIE0 474 aaPredicted RBP11.37□□□□□ -0.59
CCBE1-202ENST00000439986 SAMHD1Q9Y3Z3 626 aaKnown RBP11.37□□□□□ -0.59
CCBE1-202ENST00000439986 A0A1W2PQH9 124 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 A0A1W2PRV1 198 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 CIB4A0PJX0 185 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 OR6C70A6NIJ9 312 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 FAM159BA6NKW6 160 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 STX16O14662 325 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 SLC22A3O75751 556 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 FTH1P02794 183 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 GIMD1P0DJR0 217 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 GNAZP19086 355 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 BRCC3P46736 316 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 TMPRSS11BQ86T26 416 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 GHDCQ8N2G8 530 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 BPIFCQ8NFQ6 507 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 DUSP16Q9BY84 665 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 UCKL1Q9NWZ5 548 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 RHPN2P1A8MT19 583 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 GNAO1P09471 354 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 BMP7P18075 431 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 RPS9P46781 194 aaKnown RBP11.37□□□□□ -0.59
CCBE1-202ENST00000439986 MANFP55145 182 aaKnown RBP11.37□□□□□ -0.59
CCBE1-202ENST00000439986 SPATC1Q76KD6 591 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 GRAMD2AQ8IUY3 354 aa11.37□□□□□ -0.59
CCBE1-202ENST00000439986 CLIP4Q8N3C7 705 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms