RNA–Protein interactions for RNA: ENST00000438700.7

PTCHD3-201, Transcript of patched domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTCHD3, Length 2,529 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-201ENST00000438700 TSPEARQ8WU66 669 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 PPM1MQ96MI6 270 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 C19orf43Q9BQ61 176 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 ACTL8Q9H568 366 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 ZIM2Q9NZV7 527 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 PTBP2Q9UKA9 531 aaKnown RBP13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 SLC8A2Q9UPR5 921 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 SLC27A6Q9Y2P4 619 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 ST14Q9Y5Y6 855 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 TMEM221A6NGB7 291 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 J3QRK9 145 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 CTSLP07711 333 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 BMP2P12643 396 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 IL10P22301 178 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 RPS3P23396 243 aaKnown RBP eCLIP13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 CLCN2P51788 898 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 RPL38P63173 70 aaKnown RBP13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 PTSQ03393 145 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 SFSWAPQ12872 951 aaKnown RBP13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 BNIP3Q12983 259 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 GRIK2Q13002 908 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 TANGO2Q6ICL3 276 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 TMEM26Q6ZUK4 368 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 ZFAND4Q86XD8 727 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 FBXL8Q96CD0 374 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 FBXL20Q96IG2 436 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 FAM83CQ9BQN1 747 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 OARD1Q9Y530 152 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 SZT2Q5T011 3432 aa13.56□□□□□ -0.24
PTCHD3-201ENST00000438700 CCDC85CA6NKD9 419 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 PRRT4C9JH25 899 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 SRPRAP08240 638 aaKnown RBP13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 NUP107P57740 925 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 MTPNP58546 118 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 POLR2LP62875 67 aaKnown RBP13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 HMGCS1Q01581 520 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 ARHGEF7Q14155 803 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 PTGR1Q14914 329 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 POM121L1PQ3SYA9 428 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 TTC33Q6PID6 262 aaPredicted RBP13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 BRAT1Q6PJG6 821 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 NXPE1Q8N323 547 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 CBARPQ8N350 705 aaPredicted RBP13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 ANKFN1Q8N957 763 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 TANKQ92844 425 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 ABHD8Q96I13 439 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 CXorf21Q9HAI6 301 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 ZFP14Q9HCL3 533 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 HPS4Q9NQG7 708 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 AGPAT4Q9NRZ5 378 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 OPTCQ9UBM4 332 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 KLQ9UEF7 1012 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 IL36AQ9UHA7 158 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 COL4A3Q01955 1670 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 KIF26AQ9ULI4 1882 aaPredicted RBP13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 TRBV5-4A0A0C4DH59 114 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 A0A1W2PQ67 120 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 H3BMQ9 156 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 BMP10O95393 424 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 C1SP09871 688 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 SLC2A4P14672 509 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 ST8SIA6P61647 398 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 CD300CQ08708 224 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 GPRC6AQ5T6X5 926 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 ANKRD54Q6NXT1 300 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 VITQ6UXI7 678 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 THAP11Q96EK4 314 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 COG8Q96MW5 612 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 SEPHS2Q99611 448 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 NPLQ9BXD5 320 aaPredicted RBP13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 RPF2Q9H7B2 306 aaKnown RBP13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 TRPV4Q9HBA0 871 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 HEBP1Q9NRV9 189 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 SELENONQ9NZV5 590 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 DEC1Q9P2X7 70 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 ZNHIT2Q9UHR6 403 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 CDH7Q9ULB5 785 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 OAZ3Q9UMX2 235 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 PLXNB3Q9ULL4 1909 aa13.55□□□□□ -0.24
PTCHD3-201ENST00000438700 TCF20Q9UGU0 1960 aaKnown RBP13.54□□□□□ -0.24
PTCHD3-201ENST00000438700 KANSL1LA0AUZ9 987 aa13.54□□□□□ -0.24
PTCHD3-201ENST00000438700 FUCA1P04066 466 aa13.54□□□□□ -0.24
PTCHD3-201ENST00000438700 FASP25445 335 aa13.54□□□□□ -0.24
PTCHD3-201ENST00000438700 RXRGP48443 463 aa13.54□□□□□ -0.24
PTCHD3-201ENST00000438700 MRPL19P49406 292 aaKnown RBP13.54□□□□□ -0.24
PTCHD3-201ENST00000438700 OR4D2P58180 307 aa13.54□□□□□ -0.24
PTCHD3-201ENST00000438700 TUBA4AP68366 448 aa13.54□□□□□ -0.24
PTCHD3-201ENST00000438700 EMX2Q04743 252 aa13.54□□□□□ -0.24
PTCHD3-201ENST00000438700 ATP1A4Q13733 1029 aa13.54□□□□□ -0.24
PTCHD3-201ENST00000438700 SELPLGQ14242 412 aa13.54□□□□□ -0.24
PTCHD3-201ENST00000438700 PPP4R4Q6NUP7 873 aa13.54□□□□□ -0.24
PTCHD3-201ENST00000438700 DET1Q7L5Y6 550 aa13.54□□□□□ -0.24
PTCHD3-201ENST00000438700 SFTPA1Q8IWL2 248 aa13.54□□□□□ -0.24
PTCHD3-201ENST00000438700 RHBDF1Q96CC6 855 aa13.54□□□□□ -0.24
PTCHD3-201ENST00000438700 THG1LQ9NWX6 298 aaKnown RBP13.54□□□□□ -0.24
PTCHD3-201ENST00000438700 OBP2AQ9NY56 170 aa13.54□□□□□ -0.24
PTCHD3-201ENST00000438700 ZNF232Q9UNY5 417 aa13.54□□□□□ -0.24
PTCHD3-201ENST00000438700 KIAA1549LQ6ZVL6 1849 aa13.54□□□□□ -0.24
PTCHD3-201ENST00000438700 RNF103-CHMP3A0A140T963 221 aa13.54□□□□□ -0.24
PTCHD3-201ENST00000438700 H0YJX3 145 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms