RNA–Protein interactions for RNA: ENST00000438647.3

RAPGEF1-206, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene RAPGEF1, Length 588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-206ENST00000438647 CDHR3Q6ZTQ4 885 aa23.87■■□□□ 1.41
RAPGEF1-206ENST00000438647 IGDCC3Q8IVU1 814 aa23.87■■□□□ 1.41
RAPGEF1-206ENST00000438647 CNTN4Q8IWV2 1026 aa23.87■■□□□ 1.41
RAPGEF1-206ENST00000438647 STARD8Q92502 1023 aa23.87■■□□□ 1.41
RAPGEF1-206ENST00000438647 CATSPER2Q96P56 530 aa23.87■■□□□ 1.41
RAPGEF1-206ENST00000438647 IL17FQ96PD4 163 aa23.87■■□□□ 1.41
RAPGEF1-206ENST00000438647 AARSD1Q9BTE6 412 aaKnown RBP23.87■■□□□ 1.41
RAPGEF1-206ENST00000438647 PPANQ9NQ55 473 aaKnown RBP23.87■■□□□ 1.41
RAPGEF1-206ENST00000438647 INTS7Q9NVH2 962 aaKnown RBP23.87■■□□□ 1.41
RAPGEF1-206ENST00000438647 SPATA7Q9P0W8 599 aa23.87■■□□□ 1.41
RAPGEF1-206ENST00000438647 GALPQ9UBC7 116 aa23.87■■□□□ 1.41
RAPGEF1-206ENST00000438647 CIDEBQ9UHD4 219 aa23.87■■□□□ 1.41
RAPGEF1-206ENST00000438647 TSR3Q9UJK0 312 aaKnown RBP23.87■■□□□ 1.41
RAPGEF1-206ENST00000438647 CHMP2BQ9UQN3 213 aa23.87■■□□□ 1.41
RAPGEF1-206ENST00000438647 TEX264Q9Y6I9 313 aa23.87■■□□□ 1.41
RAPGEF1-206ENST00000438647 VPS26AO75436 327 aa23.86■■□□□ 1.41
RAPGEF1-206ENST00000438647 FKBP9O95302 570 aa23.86■■□□□ 1.41
RAPGEF1-206ENST00000438647 CATP04040 527 aaKnown RBP23.86■■□□□ 1.41
RAPGEF1-206ENST00000438647 ITGA1P56199 1179 aa23.86■■□□□ 1.41
RAPGEF1-206ENST00000438647 CALCOCO2Q13137 446 aa23.86■■□□□ 1.41
RAPGEF1-206ENST00000438647 UGT3A1Q6NUS8 523 aa23.86■■□□□ 1.41
RAPGEF1-206ENST00000438647 GPR135Q8IZ08 494 aa23.86■■□□□ 1.41
RAPGEF1-206ENST00000438647 HMGCLL1Q8TB92 370 aa23.86■■□□□ 1.41
RAPGEF1-206ENST00000438647 INPP5DQ92835 1189 aa23.86■■□□□ 1.41
RAPGEF1-206ENST00000438647 CFAP36Q96G28 342 aa23.86■■□□□ 1.41
RAPGEF1-206ENST00000438647 LRFN5Q96NI6 719 aa23.86■■□□□ 1.41
RAPGEF1-206ENST00000438647 CAMSAP3Q9P1Y5 1249 aaPredicted RBP23.86■■□□□ 1.41
RAPGEF1-206ENST00000438647 SNX24Q9Y343 169 aa23.86■■□□□ 1.41
RAPGEF1-206ENST00000438647 DHRS7Q9Y394 339 aa23.86■■□□□ 1.41
RAPGEF1-206ENST00000438647 C21orf140B9A014 251 aa23.85■■□□□ 1.41
RAPGEF1-206ENST00000438647 E7EQ34 232 aa23.85■■□□□ 1.41
RAPGEF1-206ENST00000438647 EIF3FO00303 357 aaPredicted RBP23.85■■□□□ 1.41
RAPGEF1-206ENST00000438647 KLK3P07288 261 aaPredicted RBP23.85■■□□□ 1.41
RAPGEF1-206ENST00000438647 F7P08709 466 aaPredicted RBP23.85■■□□□ 1.41
RAPGEF1-206ENST00000438647 CBSLP0DN79 551 aa23.85■■□□□ 1.41
RAPGEF1-206ENST00000438647 CBSP35520 551 aa23.85■■□□□ 1.41
RAPGEF1-206ENST00000438647 RPL21P46778 160 aaKnown RBP23.85■■□□□ 1.41
RAPGEF1-206ENST00000438647 CYP4F2P78329 520 aa23.85■■□□□ 1.41
RAPGEF1-206ENST00000438647 CRTC2Q53ET0 693 aaPredicted RBP23.85■■□□□ 1.41
RAPGEF1-206ENST00000438647 PCSK4Q6UW60 755 aa23.85■■□□□ 1.41
RAPGEF1-206ENST00000438647 GALNT7Q86SF2 657 aa23.85■■□□□ 1.41
RAPGEF1-206ENST00000438647 OR1L3Q8NH93 324 aa23.85■■□□□ 1.41
RAPGEF1-206ENST00000438647 PWWP2AQ96N64 755 aa23.85■■□□□ 1.41
RAPGEF1-206ENST00000438647 GPR21Q99679 349 aa23.85■■□□□ 1.41
RAPGEF1-206ENST00000438647 ARHGAP9Q9BRR9 750 aa23.85■■□□□ 1.41
RAPGEF1-206ENST00000438647 ERP44Q9BS26 406 aa23.85■■□□□ 1.41
RAPGEF1-206ENST00000438647 SLC7A5P2Q9GIP4 190 aa23.85■■□□□ 1.41
RAPGEF1-206ENST00000438647 IL17BQ9UHF5 180 aa23.85■■□□□ 1.41
RAPGEF1-206ENST00000438647 MED16Q9Y2X0 877 aa23.85■■□□□ 1.41
RAPGEF1-206ENST00000438647 PSIP1O75475 530 aaKnown RBP23.84■■□□□ 1.41
RAPGEF1-206ENST00000438647 HBQ1P09105 142 aa23.84■■□□□ 1.41
RAPGEF1-206ENST00000438647 TCN2P20062 427 aa23.84■■□□□ 1.41
RAPGEF1-206ENST00000438647 CARSP49589 748 aaKnown RBP23.84■■□□□ 1.41
RAPGEF1-206ENST00000438647 DNASE1L3Q13609 305 aa23.84■■□□□ 1.41
RAPGEF1-206ENST00000438647 SF1Q15637 639 aaKnown RBP23.84■■□□□ 1.41
RAPGEF1-206ENST00000438647 HP1BP3Q5SSJ5 553 aaPredicted RBP23.84■■□□□ 1.41
RAPGEF1-206ENST00000438647 STEAP4Q687X5 459 aa23.84■■□□□ 1.41
RAPGEF1-206ENST00000438647 LRRC8EQ6NSJ5 796 aa23.84■■□□□ 1.41
RAPGEF1-206ENST00000438647 TAX1BP1Q86VP1 789 aa23.84■■□□□ 1.41
RAPGEF1-206ENST00000438647 C2orf73Q8N5S3 287 aaPredicted RBP23.84■■□□□ 1.41
RAPGEF1-206ENST00000438647 OR9A1PQ8NGU1 263 aa23.84■■□□□ 1.41
RAPGEF1-206ENST00000438647 GIMAP7Q8NHV1 300 aa23.84■■□□□ 1.41
RAPGEF1-206ENST00000438647 EXTL1Q92935 676 aa23.84■■□□□ 1.41
RAPGEF1-206ENST00000438647 ACTR5Q9H9F9 607 aaPredicted RBP23.84■■□□□ 1.41
RAPGEF1-206ENST00000438647 FAM60AQ9NP50 221 aa23.84■■□□□ 1.41
RAPGEF1-206ENST00000438647 TAS2R13Q9NYV9 303 aa23.84■■□□□ 1.41
RAPGEF1-206ENST00000438647 WHRNQ9P202 907 aa23.84■■□□□ 1.41
RAPGEF1-206ENST00000438647 TRMT6Q9UJA5 497 aaKnown RBP23.84■■□□□ 1.41
RAPGEF1-206ENST00000438647 PCDHGA6Q9Y5G7 932 aa23.84■■□□□ 1.41
RAPGEF1-206ENST00000438647 TP73O15350 636 aa23.83■■□□□ 1.41
RAPGEF1-206ENST00000438647 MPC1LP0DKB6 136 aa23.83■■□□□ 1.41
RAPGEF1-206ENST00000438647 MAGP20916 626 aa23.83■■□□□ 1.41
RAPGEF1-206ENST00000438647 OAS2P29728 719 aaKnown RBP23.83■■□□□ 1.41
RAPGEF1-206ENST00000438647 SKIV2L2P42285 1042 aaKnown RBP23.83■■□□□ 1.41
RAPGEF1-206ENST00000438647 C2orf54Q08AI8 447 aa23.83■■□□□ 1.41
RAPGEF1-206ENST00000438647 CDC20Q12834 499 aa23.83■■□□□ 1.41
RAPGEF1-206ENST00000438647 PDIA2Q13087 525 aaKnown RBP23.83■■□□□ 1.41
RAPGEF1-206ENST00000438647 CUL1Q13616 776 aa23.83■■□□□ 1.41
RAPGEF1-206ENST00000438647 FRG1Q14331 258 aaKnown RBP23.83■■□□□ 1.41
RAPGEF1-206ENST00000438647 ZIC1Q15915 447 aa23.83■■□□□ 1.41
RAPGEF1-206ENST00000438647 CCSMST1Q4G0I0 132 aa23.83■■□□□ 1.41
RAPGEF1-206ENST00000438647 CD200R1Q8TD46 325 aa23.83■■□□□ 1.41
RAPGEF1-206ENST00000438647 CT55Q8WUE5 264 aa23.83■■□□□ 1.41
RAPGEF1-206ENST00000438647 CLIP3Q96DZ5 547 aa23.83■■□□□ 1.41
RAPGEF1-206ENST00000438647 SLC30A3Q99726 388 aa23.83■■□□□ 1.41
RAPGEF1-206ENST00000438647 FAM117AQ9C073 453 aa23.83■■□□□ 1.41
RAPGEF1-206ENST00000438647 CORO1CQ9ULV4 474 aaPredicted RBP23.83■■□□□ 1.41
RAPGEF1-206ENST00000438647 AP1M2Q9Y6Q5 423 aa23.83■■□□□ 1.41
RAPGEF1-206ENST00000438647 ZNF839A8K0R7 811 aa23.82■■□□□ 1.4
RAPGEF1-206ENST00000438647 ARHGEF33A8MVX0 844 aa23.82■■□□□ 1.4
RAPGEF1-206ENST00000438647 E7ESA3 106 aa23.82■■□□□ 1.4
RAPGEF1-206ENST00000438647 MYO1CO00159 1063 aa23.82■■□□□ 1.4
RAPGEF1-206ENST00000438647 TERTO14746 1132 aaKnown RBP23.82■■□□□ 1.4
RAPGEF1-206ENST00000438647 NKX2-8O15522 239 aa23.82■■□□□ 1.4
RAPGEF1-206ENST00000438647 RAD51CO43502 376 aa23.82■■□□□ 1.4
RAPGEF1-206ENST00000438647 KATNA1O75449 491 aa23.82■■□□□ 1.4
RAPGEF1-206ENST00000438647 OR2B3O76000 313 aa23.82■■□□□ 1.4
RAPGEF1-206ENST00000438647 F8A1P23610 371 aa23.82■■□□□ 1.4
RAPGEF1-206ENST00000438647 HSD17B2P37059 387 aa23.82■■□□□ 1.4
RAPGEF1-206ENST00000438647 CKAP4Q07065 602 aaKnown RBP23.82■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms