RNA–Protein interactions for RNA: ENST00000438629.2

LSM1P1-201, Transcript of LSM1 homolog, mRNA degradation associated pseudogene 1, humanhuman

BASIC

Gene LSM1P1, Length 273 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1P1-201ENST00000438629 KLC1Q07866 573 aa3.46□□□□□ -1.86
LSM1P1-201ENST00000438629 DMPKQ09013 629 aa3.46□□□□□ -1.86
LSM1P1-201ENST00000438629 CUL3Q13618 768 aa3.46□□□□□ -1.86
LSM1P1-201ENST00000438629 DCAF10Q5QP82 559 aa3.46□□□□□ -1.86
LSM1P1-201ENST00000438629 C20orf194Q5TEA3 1177 aa3.46□□□□□ -1.86
LSM1P1-201ENST00000438629 MFSD6Q6ZSS7 791 aa3.46□□□□□ -1.86
LSM1P1-201ENST00000438629 TMPRSS11BQ86T26 416 aa3.46□□□□□ -1.86
LSM1P1-201ENST00000438629 TMEM139Q8IV31 216 aa3.46□□□□□ -1.86
LSM1P1-201ENST00000438629 NDUFAF2Q8N183 169 aa3.46□□□□□ -1.86
LSM1P1-201ENST00000438629 RYBPQ8N488 228 aaPredicted RBP3.46□□□□□ -1.86
LSM1P1-201ENST00000438629 CAMKVQ8NCB2 501 aa3.46□□□□□ -1.86
LSM1P1-201ENST00000438629 AFAP1L1Q8TED9 768 aa3.46□□□□□ -1.86
LSM1P1-201ENST00000438629 PHLDA1Q8WV24 401 aaPredicted RBP3.46□□□□□ -1.86
LSM1P1-201ENST00000438629 FCAMRQ8WWV6 532 aa3.46□□□□□ -1.86
LSM1P1-201ENST00000438629 ZNF524Q96C55 264 aa3.46□□□□□ -1.86
LSM1P1-201ENST00000438629 SPATA17Q96L03 361 aa3.46□□□□□ -1.86
LSM1P1-201ENST00000438629 PGLYRP2Q96PD5 576 aa3.46□□□□□ -1.86
LSM1P1-201ENST00000438629 F2RL3Q96RI0 385 aa3.46□□□□□ -1.86
LSM1P1-201ENST00000438629 RAD9AQ99638 391 aa3.46□□□□□ -1.86
LSM1P1-201ENST00000438629 NAA11Q9BSU3 229 aaPredicted RBP3.46□□□□□ -1.86
LSM1P1-201ENST00000438629 KRTAP9-8Q9BYQ0 159 aa3.46□□□□□ -1.86
LSM1P1-201ENST00000438629 CDH20Q9HBT6 801 aa3.46□□□□□ -1.86
LSM1P1-201ENST00000438629 MYNNQ9NPC7 610 aa3.46□□□□□ -1.86
LSM1P1-201ENST00000438629 SDR39U1Q9NRG7 319 aaPredicted RBP3.46□□□□□ -1.86
LSM1P1-201ENST00000438629 CWC25Q9NXE8 425 aaPredicted RBP3.46□□□□□ -1.86
LSM1P1-201ENST00000438629 TBC1D7Q9P0N9 293 aa3.46□□□□□ -1.86
LSM1P1-201ENST00000438629 C5AR2Q9P296 337 aa3.46□□□□□ -1.86
LSM1P1-201ENST00000438629 PCDH11YQ9BZA8 1340 aa3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 GIMAP1-GIMAP5A0A087WTJ2 511 aa3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 IGHV4-61A0A0C4DH41 118 aa3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 A0A1W2PPM1 405 aa3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 DNM1LO00429 736 aa3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 LINC01565O15544 149 aa3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 SPRY1O43609 319 aaPredicted RBP3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 CELF2O95319 508 aaKnown RBP3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 EML2O95834 649 aa3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 IGHV4-59P01825 116 aa3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 ATP5BP06576 529 aaKnown RBP3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 OR52Z1P0C646 297 aa3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 FAM200BP0CF97 657 aa3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 SMIM18P0DKX4 95 aa3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 ERVK-10P10266 1014 aa3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 IRF2P14316 349 aa3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 MYL6BP14649 208 aa3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 CA4P22748 312 aa3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 CEACAM8P31997 349 aaPredicted RBP3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 HSPA4P34932 840 aa3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 MAPK12P53778 367 aa3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 POLR2LP62875 67 aaKnown RBP3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 ROR1Q01973 937 aa3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 ACSM1Q08AH1 577 aa3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 PPIGQ13427 754 aaKnown RBP eCLIP3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 CAMK2DQ13557 499 aa3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 ITPRIPL2Q3MIP1 535 aa3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 MCMDC2Q4G0Z9 681 aa3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 PDLIM3Q53GG5 364 aaPredicted RBP3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 MEX3BQ6ZN04 569 aaKnown RBP3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 SLFN11Q7Z7L1 901 aa3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 CDK20Q8IZL9 346 aa3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 MARVELD2Q8N4S9 558 aa3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 THAP8Q8NA92 274 aa3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 SLC4A11Q8NBS3 891 aa3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 MRPS27Q92552 414 aaKnown RBP3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 SPSB1Q96BD6 273 aa3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 TRIM44Q96DX7 344 aaPredicted RBP3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 GIMAP5Q96F15 307 aa3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 THOC1Q96FV9 657 aaKnown RBP3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 LINC00615Q96LM1 132 aaPredicted RBP3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 SPAG5Q96R06 1193 aa3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 CPNE1Q99829 537 aa3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 URM1Q9BTM9 101 aaKnown RBP3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 LAT2Q9GZY6 243 aa3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 S1PR5Q9H228 398 aa3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 CPVLQ9H3G5 476 aa3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 TXLNGQ9NUQ3 528 aa3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 CACNG4Q9UBN1 327 aa3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 KCNJ14Q9UNX9 436 aa3.45□□□□□ -1.86
LSM1P1-201ENST00000438629 TSPY2A6NKD2 308 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 C2orf81A6NN90 581 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 SLCO1B7G3V0H7 640 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 KLF11O14901 512 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 KRT86O43790 486 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 DIAPH2O60879 1101 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 CLPTM1O96005 669 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 FRMD6-AS1P0C7T7 363 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 PRSS56P0CW18 603 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 FDPSP14324 419 aaKnown RBP3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 PTPN3P26045 913 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 OAS2P29728 719 aaKnown RBP3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 CDC25CP30307 473 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 CHRNB4P30926 498 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 HSD17B3P37058 310 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 CCR10P46092 362 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 HNRNPKP61978 463 aaKnown RBP eCLIP3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 CDR2Q01850 454 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 TFCP2Q12800 502 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 ITGA7Q13683 1181 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 KRT81Q14533 505 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 TEAD2Q15562 447 aa3.44□□□□□ -1.86
LSM1P1-201ENST00000438629 CA9Q16790 459 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms