RNA–Protein interactions for RNA: ENST00000438419.6

TRAPPC13-204, Transcript of trafficking protein particle complex 13, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene TRAPPC13, Length 1,437 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC13-204ENST00000438419 FAM170AA1A519 330 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 PIGNO95427 931 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 WDPCPO95876 746 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 CYP11B2P19099 503 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 TLX1P31314 330 aaPredicted RBP3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 CTNNA1P35221 906 aaKnown RBP3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 TNNT3P45378 269 aaPredicted RBP3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 CDH11P55287 796 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 TUBB4BP68371 445 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 PRKCZQ05513 592 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 LGALS3BPQ08380 585 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 MZT1Q08AG7 82 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 BFSP1Q12934 665 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 ZNF273Q14593 569 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 ELFN2Q5R3F8 820 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 FAM198BQ6UWH4 519 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 CFAP206Q8IYR0 622 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 MAML2Q8IZL2 1156 aaPredicted RBP3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 FCAMRQ8WWV6 532 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 ROBO4Q8WZ75 1007 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 HSD17B8Q92506 261 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 NR4A3Q92570 626 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 FBXO17Q96EF6 278 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 DUX3Q96PT4 197 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 CITED2Q99967 270 aaPredicted RBP3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 FERMT1Q9BQL6 677 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 MGME1Q9BQP7 344 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 THUMPD3Q9BV44 507 aaKnown RBP3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 PELI2Q9HAT8 420 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 MYNNQ9NPC7 610 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 SPHK1Q9NYA1 384 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 ZDHHC2Q9UIJ5 367 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 CPSF3Q9UKF6 684 aaKnown RBP3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 GTF3C4Q9UKN8 822 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 PRR23AA6NEV1 266 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 PRKRAO75569 313 aaKnown RBP3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 ACSL3O95573 720 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 ATP5BP06576 529 aaKnown RBP3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 RAB40ALP0C0E4 278 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 ERVK-10P10266 1014 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 PDGFRAP16234 1089 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 EEF1B2P24534 225 aaKnown RBP3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 ITGA3P26006 1051 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 HOXC8P31273 242 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 CAPZA1P52907 286 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 PPIGQ13427 754 aaKnown RBP eCLIP3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 GFI1BQ5VTD9 330 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 ARHGAP24Q8N264 748 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 DNAJC22Q8N4W6 341 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 OR13J1Q8NGT2 312 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 FGFBP3Q8TAT2 258 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 SSMEM1Q8WWF3 244 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 SYN2Q92777 582 aaPredicted RBP3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 SPSB1Q96BD6 273 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 DHX58Q96C10 678 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 F2RL3Q96RI0 385 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 SLC52A3Q9NQ40 469 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 SERINC1Q9NRX5 453 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 FLRT3Q9NZU0 649 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 MDFICQ9P1T7 246 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 B3GAT1Q9P2W7 334 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 RASAL2Q9UJF2 1139 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 MTUS1Q9ULD2 1270 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 ABT1Q9ULW3 272 aaKnown RBP3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 C2CD2Q9Y426 696 aa3.36□□□□□ -1.87
TRAPPC13-204ENST00000438419 WDR46O15213 610 aaKnown RBP3.35□□□□□ -1.87
TRAPPC13-204ENST00000438419 SLC22A2O15244 555 aa3.35□□□□□ -1.87
TRAPPC13-204ENST00000438419 SLU7O95391 586 aaKnown RBP3.35□□□□□ -1.87
TRAPPC13-204ENST00000438419 TGDSO95455 350 aa3.35□□□□□ -1.87
TRAPPC13-204ENST00000438419 PLA2G4BP0C869 781 aa3.35□□□□□ -1.87
TRAPPC13-204ENST00000438419 EFNA1P20827 205 aaPredicted RBP3.35□□□□□ -1.87
TRAPPC13-204ENST00000438419 MUTP22033 750 aa3.35□□□□□ -1.87
TRAPPC13-204ENST00000438419 TCEA1P23193 301 aaKnown RBP3.35□□□□□ -1.87
TRAPPC13-204ENST00000438419 PTPN3P26045 913 aa3.35□□□□□ -1.87
TRAPPC13-204ENST00000438419 GLIPR1P48060 266 aa3.35□□□□□ -1.87
TRAPPC13-204ENST00000438419 BMXP51813 675 aa3.35□□□□□ -1.87
TRAPPC13-204ENST00000438419 DMPKQ09013 629 aa3.35□□□□□ -1.87
TRAPPC13-204ENST00000438419 KIAA1644Q3SXP7 199 aa3.35□□□□□ -1.87
TRAPPC13-204ENST00000438419 PRR27Q6MZM9 219 aa3.35□□□□□ -1.87
TRAPPC13-204ENST00000438419 MFSD6Q6ZSS7 791 aa3.35□□□□□ -1.87
TRAPPC13-204ENST00000438419 TMPRSS11BQ86T26 416 aa3.35□□□□□ -1.87
TRAPPC13-204ENST00000438419 TLK2Q86UE8 772 aa3.35□□□□□ -1.87
TRAPPC13-204ENST00000438419 NUDT13Q86X67 352 aa3.35□□□□□ -1.87
TRAPPC13-204ENST00000438419 NPEPL1Q8NDH3 523 aa3.35□□□□□ -1.87
TRAPPC13-204ENST00000438419 FAM76AQ8TAV0 307 aa3.35□□□□□ -1.87
TRAPPC13-204ENST00000438419 GRHL3Q8TE85 626 aa3.35□□□□□ -1.87
TRAPPC13-204ENST00000438419 IRGQQ8WZA9 623 aa3.35□□□□□ -1.87
TRAPPC13-204ENST00000438419 EXT2Q93063 718 aa3.35□□□□□ -1.87
TRAPPC13-204ENST00000438419 TMEM143Q96AN5 459 aa3.35□□□□□ -1.87
TRAPPC13-204ENST00000438419 ZNF501Q96CX3 271 aaPredicted RBP3.35□□□□□ -1.87
TRAPPC13-204ENST00000438419 OTUB1Q96FW1 271 aaPredicted RBP3.35□□□□□ -1.87
TRAPPC13-204ENST00000438419 VMP1Q96GC9 406 aa3.35□□□□□ -1.87
TRAPPC13-204ENST00000438419 DESI2Q9BSY9 194 aa3.35□□□□□ -1.87
TRAPPC13-204ENST00000438419 KATNB1Q9BVA0 655 aa3.35□□□□□ -1.87
TRAPPC13-204ENST00000438419 GKN1Q9NS71 199 aa3.35□□□□□ -1.87
TRAPPC13-204ENST00000438419 ZNF701Q9NV72 531 aaPredicted RBP3.35□□□□□ -1.87
TRAPPC13-204ENST00000438419 LRWD1Q9UFC0 647 aa3.35□□□□□ -1.87
TRAPPC13-204ENST00000438419 IGLV9-49A0A0B4J1Y8 123 aa3.34□□□□□ -1.88
TRAPPC13-204ENST00000438419 LOC101059948A0A1B0GTJ6 334 aa3.34□□□□□ -1.88
TRAPPC13-204ENST00000438419 A0A1W2PPQ1 181 aa3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms