RNA–Protein interactions for RNA: ENST00000437425.6

SGCE-205, Transcript of sarcoglycan epsilon, humanhuman

TSL 2 BASIC

Gene SGCE, Length 1,508 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-205ENST00000437425 WDR60Q8WVS4 1066 aa14.95□□□□□ -0.02
SGCE-205ENST00000437425 SELENOMQ8WWX9 145 aa14.95□□□□□ -0.02
SGCE-205ENST00000437425 RAD51AP1Q96B01 352 aa14.95□□□□□ -0.02
SGCE-205ENST00000437425 REPS1Q96D71 796 aa14.95□□□□□ -0.02
SGCE-205ENST00000437425 CDRT15Q96T59 188 aa14.95□□□□□ -0.02
SGCE-205ENST00000437425 PKP4Q99569 1192 aa14.95□□□□□ -0.02
SGCE-205ENST00000437425 ZBTB18Q99592 522 aa14.95□□□□□ -0.02
SGCE-205ENST00000437425 NPAS2Q99743 824 aa14.95□□□□□ -0.02
SGCE-205ENST00000437425 TIMM29Q9BSF4 260 aa14.95□□□□□ -0.02
SGCE-205ENST00000437425 LRTM1Q9HBL6 345 aa14.95□□□□□ -0.02
SGCE-205ENST00000437425 CD248Q9HCU0 757 aa14.95□□□□□ -0.02
SGCE-205ENST00000437425 C1orf109Q9NX04 203 aa14.95□□□□□ -0.02
SGCE-205ENST00000437425 STX18Q9P2W9 335 aaKnown RBP14.95□□□□□ -0.02
SGCE-205ENST00000437425 FAM8A1Q9UBU6 413 aa14.95□□□□□ -0.02
SGCE-205ENST00000437425 SERGEFQ9UGK8 458 aa14.95□□□□□ -0.02
SGCE-205ENST00000437425 LIMD1Q9UGP4 676 aa14.95□□□□□ -0.02
SGCE-205ENST00000437425 ANGPTL2Q9UKU9 493 aa14.95□□□□□ -0.02
SGCE-205ENST00000437425 ZFR2Q9UPR6 939 aaKnown RBP14.95□□□□□ -0.02
SGCE-205ENST00000437425 POMPQ9Y244 141 aa14.95□□□□□ -0.02
SGCE-205ENST00000437425 KCNE1BA0A087WTH5 132 aa14.94□□□□□ -0.02
SGCE-205ENST00000437425 H3BQ06 376 aaPredicted RBP14.94□□□□□ -0.02
SGCE-205ENST00000437425 NR5A2O00482 541 aa14.94□□□□□ -0.02
SGCE-205ENST00000437425 SOX1O00570 391 aaPredicted RBP14.94□□□□□ -0.02
SGCE-205ENST00000437425 MAN2B1O00754 1011 aa14.94□□□□□ -0.02
SGCE-205ENST00000437425 FBP2O00757 339 aa14.94□□□□□ -0.02
SGCE-205ENST00000437425 PAK4O96013 591 aaPredicted RBP14.94□□□□□ -0.02
SGCE-205ENST00000437425 KELP23276 732 aa14.94□□□□□ -0.02
SGCE-205ENST00000437425 JAK1P23458 1154 aa14.94□□□□□ -0.02
SGCE-205ENST00000437425 IMPA1P29218 277 aa14.94□□□□□ -0.02
SGCE-205ENST00000437425 HALP42357 657 aa14.94□□□□□ -0.02
SGCE-205ENST00000437425 HTR6P50406 440 aa14.94□□□□□ -0.02
SGCE-205ENST00000437425 POLR2JP52435 117 aaKnown RBP14.94□□□□□ -0.02
SGCE-205ENST00000437425 DIO3P55073 304 aa14.94□□□□□ -0.02
SGCE-205ENST00000437425 CHIT1Q13231 466 aa14.94□□□□□ -0.02
SGCE-205ENST00000437425 NAE1Q13564 534 aa14.94□□□□□ -0.02
SGCE-205ENST00000437425 E2F2Q14209 437 aa14.94□□□□□ -0.02
SGCE-205ENST00000437425 SAMD4BQ5PRF9 694 aaKnown RBP14.94□□□□□ -0.02
SGCE-205ENST00000437425 TCHHL1Q5QJ38 904 aaPredicted RBP14.94□□□□□ -0.02
SGCE-205ENST00000437425 METRNLQ641Q3 311 aa14.94□□□□□ -0.02
SGCE-205ENST00000437425 FRG2Q64ET8 278 aa14.94□□□□□ -0.02
SGCE-205ENST00000437425 CRTC3Q6UUV7 619 aa14.94□□□□□ -0.02
SGCE-205ENST00000437425 DCUN1D3Q8IWE4 304 aa14.94□□□□□ -0.02
SGCE-205ENST00000437425 MINDY1Q8N5J2 469 aa14.94□□□□□ -0.02
SGCE-205ENST00000437425 SPDL1Q96EA4 605 aa14.94□□□□□ -0.02
SGCE-205ENST00000437425 CLPTM1LQ96KA5 538 aa14.94□□□□□ -0.02
SGCE-205ENST00000437425 FRG2BQ96QU4 278 aa14.94□□□□□ -0.02
SGCE-205ENST00000437425 OR52A5Q9H2C5 316 aa14.94□□□□□ -0.02
SGCE-205ENST00000437425 EHD1Q9H4M9 534 aa14.94□□□□□ -0.02
SGCE-205ENST00000437425 UBE2ZQ9H832 354 aaPredicted RBP14.94□□□□□ -0.02
SGCE-205ENST00000437425 SLC2A4RGQ9NR83 387 aa14.94□□□□□ -0.02
SGCE-205ENST00000437425 LEF1Q9UJU2 399 aaPredicted RBP14.94□□□□□ -0.02
SGCE-205ENST00000437425 PCDHGA11Q9Y5H2 935 aa14.94□□□□□ -0.02
SGCE-205ENST00000437425 ANKRD12Q6UB98 2062 aa14.93□□□□□ -0.02
SGCE-205ENST00000437425 TBC1D3DA0A087WVF3 549 aa14.93□□□□□ -0.02
SGCE-205ENST00000437425 TBC1D3IA0A087WXS9 549 aa14.93□□□□□ -0.02
SGCE-205ENST00000437425 TBC1D3EA0A087X179 549 aa14.93□□□□□ -0.02
SGCE-205ENST00000437425 TBC1D3KA0A087X1G2 549 aa14.93□□□□□ -0.02
SGCE-205ENST00000437425 C15orf38-AP3S2A0A0A6YYH1 394 aa14.93□□□□□ -0.02
SGCE-205ENST00000437425 TBC1D3FA6NER0 549 aaPredicted RBP14.93□□□□□ -0.02
SGCE-205ENST00000437425 ANTXRLA6NF34 631 aa14.93□□□□□ -0.02
SGCE-205ENST00000437425 CCDC154A6NI56 674 aa14.93□□□□□ -0.02
SGCE-205ENST00000437425 TBC1D3LB9A6J9 549 aa14.93□□□□□ -0.02
SGCE-205ENST00000437425 H0YIV9 168 aa14.93□□□□□ -0.02
SGCE-205ENST00000437425 CACNB4O00305 520 aaPredicted RBP14.93□□□□□ -0.02
SGCE-205ENST00000437425 TRIM38O00635 465 aa14.93□□□□□ -0.02
SGCE-205ENST00000437425 PI15O43692 258 aa14.93□□□□□ -0.02
SGCE-205ENST00000437425 SLC16A8O95907 504 aa14.93□□□□□ -0.02
SGCE-205ENST00000437425 TBC1D3HP0C7X1 549 aa14.93□□□□□ -0.02
SGCE-205ENST00000437425 PRPS2P11908 318 aa14.93□□□□□ -0.02
SGCE-205ENST00000437425 SLC2A4P14672 509 aa14.93□□□□□ -0.02
SGCE-205ENST00000437425 GCKP35557 465 aa14.93□□□□□ -0.02
SGCE-205ENST00000437425 CPSF6Q16630 551 aaKnown RBP eCLIP14.93□□□□□ -0.02
SGCE-205ENST00000437425 ZXDCQ2QGD7 858 aaPredicted RBP14.93□□□□□ -0.02
SGCE-205ENST00000437425 PAGE2BQ5JRK9 111 aa14.93□□□□□ -0.02
SGCE-205ENST00000437425 TBC1D3GQ6DHY5 549 aa14.93□□□□□ -0.02
SGCE-205ENST00000437425 TBC1D3CQ6IPX1 549 aa14.93□□□□□ -0.02
SGCE-205ENST00000437425 GRHL2Q6ISB3 625 aa14.93□□□□□ -0.02
SGCE-205ENST00000437425 C8orf82Q6P1X6 216 aaPredicted RBP14.93□□□□□ -0.02
SGCE-205ENST00000437425 SCIMPQ6UWF3 145 aa14.93□□□□□ -0.02
SGCE-205ENST00000437425 ARPINQ7Z6K5 226 aa14.93□□□□□ -0.02
SGCE-205ENST00000437425 CACUL1Q86Y37 369 aa14.93□□□□□ -0.02
SGCE-205ENST00000437425 TBC1D3Q8IZP1 549 aaPredicted RBP14.93□□□□□ -0.02
SGCE-205ENST00000437425 RAB42Q8N4Z0 105 aa14.93□□□□□ -0.02
SGCE-205ENST00000437425 LILRA3Q8N6C8 439 aaPredicted RBP14.93□□□□□ -0.02
SGCE-205ENST00000437425 OR9I1Q8NGQ6 314 aa14.93□□□□□ -0.02
SGCE-205ENST00000437425 FAM3CQ92520 227 aa14.93□□□□□ -0.02
SGCE-205ENST00000437425 FOXJ1Q92949 421 aa14.93□□□□□ -0.02
SGCE-205ENST00000437425 CMTM7Q96FZ5 175 aa14.93□□□□□ -0.02
SGCE-205ENST00000437425 LRCH3Q96II8 777 aa14.93□□□□□ -0.02
SGCE-205ENST00000437425 ATG10Q9H0Y0 220 aa14.93□□□□□ -0.02
SGCE-205ENST00000437425 BRF2Q9HAW0 419 aa14.93□□□□□ -0.02
SGCE-205ENST00000437425 MMP17Q9ULZ9 603 aa14.93□□□□□ -0.02
SGCE-205ENST00000437425 TMEM98Q9Y2Y6 226 aa14.93□□□□□ -0.02
SGCE-205ENST00000437425 DYRK1BQ9Y463 629 aa14.93□□□□□ -0.02
SGCE-205ENST00000437425 LRRC72A6NJI9 287 aa14.92□□□□□ -0.02
SGCE-205ENST00000437425 TOR1BO14657 336 aa14.92□□□□□ -0.02
SGCE-205ENST00000437425 FFAR3O14843 346 aa14.92□□□□□ -0.02
SGCE-205ENST00000437425 CFLARO15519 480 aa14.92□□□□□ -0.02
SGCE-205ENST00000437425 GPR42O15529 346 aa14.92□□□□□ -0.02
SGCE-205ENST00000437425 EEDO75530 441 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms