RNA–Protein interactions for RNA: ENST00000436412.1

NIF3L1-208, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 3

Gene NIF3L1, Length 479 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-208ENST00000436412 E2F3O00716 465 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 MTX2O75431 263 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 FTLP02792 175 aaPredicted RBP8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 HLA-DQB2P05538 268 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 MMP2P08253 660 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 PYGMP11217 842 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 MTHFD1P11586 935 aaKnown RBP8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 BPIP17213 487 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 CDH3P22223 829 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 HNRNPH3P31942 346 aaKnown RBP8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 CA5AP35218 305 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 CD86P42081 329 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 ARCN1P48444 511 aaKnown RBP8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 KPNA2P52292 529 aaKnown RBP8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 HK2P52789 917 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 ABRQ12979 859 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 AIMP2Q13155 320 aaKnown RBP8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 XRCC4Q13426 336 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 KRT81Q14533 505 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 PTCHD3Q3KNS1 767 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 KHDC1Q4VXA5 237 aaKnown RBP8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 ZNF789Q5FWF6 425 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 LDLRAP1Q5SW96 308 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 PRAMEF17Q5VTA0 474 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 METRNLQ641Q3 311 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 IGFL2Q6UWQ7 119 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 SPNS3Q6ZMD2 512 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 SYDE1Q6ZW31 735 aaPredicted RBP8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 IRF2BP2Q7Z5L9 587 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 RELL1Q8IUW5 271 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 ANKRD20A12PQ8NF67 263 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 OR1L3Q8NH93 324 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 GDAP1Q8TB36 358 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 ABHD4Q8TB40 342 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 FAM71BQ8TC56 605 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 GRHL3Q8TE85 626 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 PTERQ96BW5 349 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 ERGIC2Q96RQ1 377 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 TLR10Q9BXR5 811 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 GPR63Q9BZJ6 419 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 KIR3DX1Q9H7L2 352 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 P4HTMQ9NXG6 502 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 VTI1BQ9UEU0 232 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 SLC24A2Q9UI40 661 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 POMT2Q9UKY4 750 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 ACSL5Q9ULC5 683 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 SHOC2Q9UQ13 582 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 COLEC10Q9Y6Z7 277 aa8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 FLNAP21333 2647 aaKnown RBP8.13□□□□□ -1.11
NIF3L1-208ENST00000436412 LGALS16A8MUM7 142 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 ZNF749O43361 778 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 LDB2O43679 373 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 MFSD11O43934 449 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 POP7O75817 140 aaKnown RBP8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 LCA5LO95447 670 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 TCF4P15884 667 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 HLA-DPA1P20036 260 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 CAPN3P20807 821 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 NDUFS1P28331 727 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 HMGCLP35914 325 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 FOLR3P41439 243 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 MPP2Q14168 576 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 BECN1Q14457 450 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 SLC14A2Q15849 920 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 CYP2A13Q16696 494 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 ANO6Q4KMQ2 910 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 ATP13A5Q4VNC0 1218 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 AGAP7PQ5VUJ5 663 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 MTFR2Q6P444 385 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 B4GALNT4Q76KP1 1039 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 REC114Q7Z4M0 266 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 FJX1Q86VR8 437 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 GPR135Q8IZ08 494 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 TTC30BQ8N4P2 665 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 NIPA2Q8N8Q9 360 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 GOLM1Q8NBJ4 401 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 OR2Y1Q8NGV0 311 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 DNAJB14Q8TBM8 379 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 PROKR1Q8TCW9 393 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 ZNF653Q96CK0 615 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 HDAC11Q96DB2 347 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 AGAP4Q96P64 663 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 GBP5Q96PP8 586 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 TRAPPC9Q96Q05 1148 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 TRIB3Q96RU7 358 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 SLX1AQ9BQ83 275 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 CLSTN2Q9H4D0 955 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 IMP3Q9NV31 184 aaKnown RBP8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 SUCOQ9UBS9 1254 aaKnown RBP8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 DUSP13Q9UII6 198 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 TMPRSS11EQ9UL52 423 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 PSMD13Q9UNM6 376 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 PTRH2Q9Y3E5 179 aaKnown RBP8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 ZNF711Q9Y462 761 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 HEBP2Q9Y5Z4 205 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 AP1M2Q9Y6Q5 423 aa8.12□□□□□ -1.11
NIF3L1-208ENST00000436412 PCSK5Q92824 1860 aa8.11□□□□□ -1.11
NIF3L1-208ENST00000436412 SHISA3A0PJX4 238 aa8.11□□□□□ -1.11
NIF3L1-208ENST00000436412 AGPSO00116 658 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms