RNA–Protein interactions for RNA: ENST00000435891.5

CLSTN1-203, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 3,829 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-203ENST00000435891 RAET1EQ8TD07 263 aa10.17□□□□□ -0.78
CLSTN1-203ENST00000435891 SLC22A17Q8WUG5 538 aa10.17□□□□□ -0.78
CLSTN1-203ENST00000435891 PPP3R2Q96LZ3 170 aa10.17□□□□□ -0.78
CLSTN1-203ENST00000435891 DPY30Q9C005 99 aa10.17□□□□□ -0.78
CLSTN1-203ENST00000435891 TOR3AQ9H497 397 aa10.17□□□□□ -0.78
CLSTN1-203ENST00000435891 HPS4Q9NQG7 708 aa10.17□□□□□ -0.78
CLSTN1-203ENST00000435891 CRLS1Q9UJA2 301 aa10.17□□□□□ -0.78
CLSTN1-203ENST00000435891 SCN8AQ9UQD0 1980 aa10.17□□□□□ -0.78
CLSTN1-203ENST00000435891 TRBV5-4A0A0C4DH59 114 aa10.17□□□□□ -0.78
CLSTN1-203ENST00000435891 DEAF1O75398 565 aaPredicted RBP10.17□□□□□ -0.78
CLSTN1-203ENST00000435891 PRKD3O94806 890 aa10.17□□□□□ -0.78
CLSTN1-203ENST00000435891 RPS3P23396 243 aaKnown RBP eCLIP10.17□□□□□ -0.782e-8■■□□□ 13.9
CLSTN1-203ENST00000435891 EEF1B2P24534 225 aaKnown RBP10.17□□□□□ -0.78
CLSTN1-203ENST00000435891 TACR1P25103 407 aa10.17□□□□□ -0.78
CLSTN1-203ENST00000435891 CTSOP43234 321 aaPredicted RBP10.17□□□□□ -0.78
CLSTN1-203ENST00000435891 STK19P49842 368 aaPredicted RBP10.17□□□□□ -0.78
CLSTN1-203ENST00000435891 CHRNB3Q05901 458 aa10.17□□□□□ -0.78
CLSTN1-203ENST00000435891 BCL2L1Q07817 233 aa10.17□□□□□ -0.78
CLSTN1-203ENST00000435891 CAMK2BQ13554 666 aa10.17□□□□□ -0.78
CLSTN1-203ENST00000435891 FAM98BQ52LJ0 330 aaKnown RBP10.17□□□□□ -0.78
CLSTN1-203ENST00000435891 GALNT18Q6P9A2 607 aa10.17□□□□□ -0.78
CLSTN1-203ENST00000435891 GCNT7Q6ZNI0 430 aa10.17□□□□□ -0.78
CLSTN1-203ENST00000435891 RNF175Q8N4F7 328 aa10.17□□□□□ -0.78
CLSTN1-203ENST00000435891 OR8J3Q8NGG0 315 aa10.17□□□□□ -0.78
CLSTN1-203ENST00000435891 MRPL9Q9BYD2 267 aaKnown RBP10.17□□□□□ -0.78
CLSTN1-203ENST00000435891 AMBRA1Q9C0C7 1298 aa10.17□□□□□ -0.78
CLSTN1-203ENST00000435891 EXD2Q9NVH0 621 aa10.17□□□□□ -0.78
CLSTN1-203ENST00000435891 BACE2Q9Y5Z0 518 aa10.17□□□□□ -0.78
CLSTN1-203ENST00000435891 MYOFQ9NZM1 2061 aa10.17□□□□□ -0.78
CLSTN1-203ENST00000435891 GRXCR2A6NFK2 248 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 PQBP1O60828 265 aaKnown RBP10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 THRBP10828 461 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 ITGALP20701 1170 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 DGKAP23743 735 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 GNPDA1P46926 289 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 RGS4P49798 205 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 HLCSP50747 726 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 B4GALNT1Q00973 533 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 CCNYL2Q5T2Q4 361 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 RBM23Q86U06 439 aaKnown RBP10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 DCAF4L2Q8NA75 395 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 SUN5Q8TC36 379 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 TANKQ92844 425 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 PYCR2Q96C36 320 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 INPP5KQ9BT40 448 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 ACPTQ9BZG2 426 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 HIPK3Q9H422 1215 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 LRTM1Q9HBL6 345 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 AASDHPPTQ9NRN7 309 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 INTS6Q9UL03 887 aaKnown RBP10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 PCDHGA8Q9Y5G5 932 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 U3KQV3 271 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 DOCK6Q96HP0 2047 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 UPK3BL1B0FP48 263 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 UPK3BL2E5RIL1 263 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 TAF4O00268 1085 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 MANBAO00462 879 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 KPNA4O00629 521 aaPredicted RBP10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 RGS14O43566 566 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 TULP3O75386 442 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 BCKDHAP12694 445 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 CD70P32970 193 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 AP1S1P61966 158 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 HJURPQ8NCD3 748 aaPredicted RBP10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 EGLN2Q96KS0 407 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 OR52E6Q96RD3 313 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 COQ7Q99807 217 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 TSEN34Q9BSV6 310 aaKnown RBP10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 CLMPQ9H6B4 373 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 SATB2Q9UPW6 733 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 EIF3LQ9Y262 564 aaKnown RBP10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 PCDHB14Q9Y5E9 798 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 ZBBXA8MT70 800 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 MYO1DO94832 1006 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 CST1P01037 141 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 DCKP27707 260 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 CDKN2CP42773 168 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 CYP4F8P98187 520 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 SLC14A1Q13336 389 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 IMPG1Q17R60 797 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 USP39Q53GS9 565 aaKnown RBP10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 XAF1Q6GPH4 301 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 Q6ZNB5 142 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 ZNF551Q7Z340 670 aaPredicted RBP10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 TRIM46Q7Z4K8 759 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 ITCHQ96J02 903 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 MBOAT4Q96T53 435 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 GORASP2Q9H8Y8 452 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 FANCEQ9HB96 536 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 TMEM45AQ9NWC5 275 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 PKD2L2Q9NZM6 624 aa10.16□□□□□ -0.78
CLSTN1-203ENST00000435891 KRBA1A5PL33 1030 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 G3V2T6 193 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 H0YAE9 185 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 CXCR6O00574 342 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 PRRG1O14668 218 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 GSTA4O15217 222 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 PDYNP01213 254 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 AKT1P31749 480 aa10.15□□□□□ -0.78
CLSTN1-203ENST00000435891 CCR7P32248 378 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms