RNA–Protein interactions for RNA: ENST00000435607.3

SCN4A-201, Transcript of sodium voltage-gated channel alpha subunit 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN4A, Length 7,805 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4A-201ENST00000435607 FAM71AQ8IYT1 594 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 TFECO14948 347 aaPredicted RBP10.98□□□□□ -0.65
SCN4A-201ENST00000435607 PAPSS1O43252 624 aaPredicted RBP10.98□□□□□ -0.65
SCN4A-201ENST00000435607 FAM214AQ32MH5 1076 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 C3P1Q6ZMU1 363 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.98□□□□□ -0.65
SCN4A-201ENST00000435607 USP30Q70CQ3 517 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 AKAP14Q86UN6 197 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 CMTR2Q8IYT2 770 aaKnown RBP10.98□□□□□ -0.65
SCN4A-201ENST00000435607 ARL10Q8N8L6 244 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 SLC35C1Q96A29 364 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 PGM2Q96G03 612 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 A0A1B0GVI7 797 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 ZNF670-ZNF695F2Z2N8 137 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 CYB5BO43169 146 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 GPR37L1O60883 481 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 GADD45GO95257 159 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 ANXA3P12429 323 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 POLR2HP52434 150 aaKnown RBP10.98□□□□□ -0.65
SCN4A-201ENST00000435607 RIDAP52758 137 aaKnown RBP10.98□□□□□ -0.65
SCN4A-201ENST00000435607 CEP76Q8TAP6 659 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 RBP7Q96R05 134 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 ELAC1Q9H777 363 aaKnown RBP10.98□□□□□ -0.65
SCN4A-201ENST00000435607 RMI1Q9H9A7 625 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 ABCB9Q9NP78 766 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 KCNN3Q9UGI6 736 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 FAM227AF5H4B4 570 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 EML1O00423 815 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 CDKN1CP49918 316 aaPredicted RBP10.98□□□□□ -0.65
SCN4A-201ENST00000435607 RFWD3Q6PCD5 774 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 LYSMD3Q7Z3D4 306 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 IQCHQ86VS3 1027 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 ELMO3Q96BJ8 720 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 OR2AG1Q9H205 316 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 EPHA3P29320 983 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 DRG2P55039 364 aaKnown RBP10.98□□□□□ -0.65
SCN4A-201ENST00000435607 LRP8Q14114 963 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 SYT16Q17RD7 645 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 MTX3Q5HYI7 312 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 PRPF38BQ5VTL8 546 aaKnown RBP10.98□□□□□ -0.65
SCN4A-201ENST00000435607 BRAT1Q6PJG6 821 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 LINC00471Q8N535 108 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 TWIST2Q8WVJ9 160 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 RCN3Q96D15 328 aa10.98□□□□□ -0.65
SCN4A-201ENST00000435607 NUMA1Q14980 2115 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 KCNU1A8MYU2 1149 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 MAN2B1O00754 1011 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 NDUFS4O43181 175 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 LYPLA1O75608 230 aaPredicted RBP10.97□□□□□ -0.65
SCN4A-201ENST00000435607 SCGB1D2O95969 90 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 CALCAP01258 141 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 ACP5P13686 325 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 PIK3CBP42338 1070 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 NRG1Q02297 640 aaPredicted RBP10.97□□□□□ -0.65
SCN4A-201ENST00000435607 PPM1MQ96MI6 270 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 CHST7Q9NS84 486 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 UNC13BO14795 1591 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 KANTRA0A1W2PQU2 76 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 DPPA5A6NC42 116 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 BHMG1C9JSJ3 638 aaPredicted RBP10.97□□□□□ -0.65
SCN4A-201ENST00000435607 NADKO95544 446 aaPredicted RBP10.97□□□□□ -0.65
SCN4A-201ENST00000435607 MALLQ13021 153 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 ABRAXAS2Q15018 415 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 GPR107Q5VW38 600 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 IL23RQ5VWK5 629 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 KIAA0895LQ68EN5 471 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 SLC26A9Q7LBE3 791 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 ZNF100Q8IYN0 542 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 SPATA6LQ8N4H0 392 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 OR5T2Q8NGG2 359 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 CPT1CQ8TCG5 803 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 SH3RF2Q8TEC5 729 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 NAA11Q9BSU3 229 aaPredicted RBP10.97□□□□□ -0.65
SCN4A-201ENST00000435607 A0A1W2PRQ8 180 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 C2orf72A6NCS6 295 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 B4GALT4O60513 344 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 SCELO95171 688 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 RCBTB2O95199 551 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 ZSCAN5DPP0CG00 497 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 RBPJQ06330 500 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 ARSKQ6UWY0 536 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 PCYOX1Q9UHG3 505 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 PLCL2Q9UPR0 1127 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 PCDHGA2Q9Y5H1 932 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 ARL5AQ9Y689 179 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 ORC5O43913 435 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 BCKDHAP12694 445 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 CLCN4P51793 760 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 BNIP3Q12983 259 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 EFR3AQ14156 821 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 PDK3Q15120 406 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 SVOPLQ8N434 492 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 SCGB1C1Q8TD33 95 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 TLR9Q9NR96 1032 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 TREHO43280 583 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 CBX6O95503 412 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 PRKCHP24723 683 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 FRS2Q8WU20 508 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 ZNF700Q9H0M5 742 aa10.97□□□□□ -0.65
SCN4A-201ENST00000435607 TBC1D17Q9HA65 648 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms