RNA–Protein interactions for RNA: ENST00000434813.3

CLK1-205, Transcript of CDC like kinase 1, humanhuman

TSL 2 BASIC

Gene CLK1, Length 2,026 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-205ENST00000434813 PLEKHS1Q5SXH7 462 aa18.12■□□□□ 0.49
CLK1-205ENST00000434813 OTUD3Q5T2D3 398 aaPredicted RBP18.12■□□□□ 0.49
CLK1-205ENST00000434813 ATG9BQ674R7 924 aa18.12■□□□□ 0.49
CLK1-205ENST00000434813 LILRA6Q6PI73 481 aa18.12■□□□□ 0.49
CLK1-205ENST00000434813 ENPP6Q6UWR7 440 aa18.12■□□□□ 0.49
CLK1-205ENST00000434813 MICU2Q8IYU8 434 aa18.12■□□□□ 0.49
CLK1-205ENST00000434813 L3MBTL4Q8NA19 623 aa18.12■□□□□ 0.49
CLK1-205ENST00000434813 FBXO30Q8TB52 745 aa18.12■□□□□ 0.49
CLK1-205ENST00000434813 CLP1Q92989 425 aaKnown RBP18.12■□□□□ 0.49
CLK1-205ENST00000434813 CPPED1Q9BRF8 314 aaPredicted RBP18.12■□□□□ 0.49
CLK1-205ENST00000434813 KCNH6Q9H252 994 aa18.12■□□□□ 0.49
CLK1-205ENST00000434813 SOX17Q9H6I2 414 aaPredicted RBP18.12■□□□□ 0.49
CLK1-205ENST00000434813 KAT8Q9H7Z6 458 aaKnown RBP18.12■□□□□ 0.49
CLK1-205ENST00000434813 PKD2L2Q9NZM6 624 aa18.12■□□□□ 0.49
CLK1-205ENST00000434813 INVSQ9Y283 1065 aa18.12■□□□□ 0.49
CLK1-205ENST00000434813 A0A096LPI6 279 aa18.11■□□□□ 0.49
CLK1-205ENST00000434813 A0A1B0GVG6 124 aa18.11■□□□□ 0.49
CLK1-205ENST00000434813 RETP07949 1114 aa18.11■□□□□ 0.49
CLK1-205ENST00000434813 HIST1H2AGP0C0S8 130 aaPredicted RBP18.11■□□□□ 0.49
CLK1-205ENST00000434813 PCNAP12004 261 aa18.11■□□□□ 0.49
CLK1-205ENST00000434813 ACPPP15309 386 aa18.11■□□□□ 0.49
CLK1-205ENST00000434813 HIST1H2ADP20671 130 aa18.11■□□□□ 0.49
CLK1-205ENST00000434813 GTDC1Q4AE62 458 aa18.11■□□□□ 0.49
CLK1-205ENST00000434813 CCNYL2Q5T2Q4 361 aa18.11■□□□□ 0.49
CLK1-205ENST00000434813 ASTLQ6HA08 431 aaPredicted RBP18.11■□□□□ 0.49
CLK1-205ENST00000434813 CALHM3Q86XJ0 350 aa18.11■□□□□ 0.49
CLK1-205ENST00000434813 ELMOD1Q8N336 334 aa18.11■□□□□ 0.49
CLK1-205ENST00000434813 MTFMTQ96DP5 389 aaKnown RBP18.11■□□□□ 0.49
CLK1-205ENST00000434813 SLC47A1Q96FL8 570 aa18.11■□□□□ 0.49
CLK1-205ENST00000434813 CMTM7Q96FZ5 175 aa18.11■□□□□ 0.49
CLK1-205ENST00000434813 HIST1H2AHQ96KK5 128 aa18.11■□□□□ 0.49
CLK1-205ENST00000434813 RDH12Q96NR8 316 aa18.11■□□□□ 0.49
CLK1-205ENST00000434813 HIST1H2AJQ99878 128 aa18.11■□□□□ 0.49
CLK1-205ENST00000434813 H2AFJQ9BTM1 129 aa18.11■□□□□ 0.49
CLK1-205ENST00000434813 NPLQ9BXD5 320 aaPredicted RBP18.11■□□□□ 0.49
CLK1-205ENST00000434813 SERHLQ9NQF3 203 aa18.11■□□□□ 0.49
CLK1-205ENST00000434813 ASAH2Q9NR71 780 aa18.11■□□□□ 0.49
CLK1-205ENST00000434813 DNAJB9Q9UBS3 223 aa18.11■□□□□ 0.49
CLK1-205ENST00000434813 LIMD1Q9UGP4 676 aa18.11■□□□□ 0.49
CLK1-205ENST00000434813 MBD1Q9UIS9 605 aaPredicted RBP18.11■□□□□ 0.49
CLK1-205ENST00000434813 PABPN1LA6NDY0 278 aaKnown RBP18.11■□□□□ 0.49
CLK1-205ENST00000434813 CXCL14O95715 111 aa18.11■□□□□ 0.49
CLK1-205ENST00000434813 ADH1AP07327 375 aa18.11■□□□□ 0.49
CLK1-205ENST00000434813 THRBP10828 461 aa18.11■□□□□ 0.49
CLK1-205ENST00000434813 ATP1B2P14415 290 aaPredicted RBP18.11■□□□□ 0.49
CLK1-205ENST00000434813 TCF3P15923 654 aa18.11■□□□□ 0.49
CLK1-205ENST00000434813 HOXB9P17482 250 aaPredicted RBP18.11■□□□□ 0.49
CLK1-205ENST00000434813 MAPK1P28482 360 aa18.11■□□□□ 0.49
CLK1-205ENST00000434813 PSRC1Q6PGN9 363 aaPredicted RBP18.11■□□□□ 0.49
CLK1-205ENST00000434813 GPR149Q86SP6 731 aa18.11■□□□□ 0.49
CLK1-205ENST00000434813 VRK3Q8IV63 474 aa18.11■□□□□ 0.49
CLK1-205ENST00000434813 POP5Q969H6 163 aaKnown RBP18.11■□□□□ 0.49
CLK1-205ENST00000434813 FAM162AQ96A26 154 aa18.11■□□□□ 0.49
CLK1-205ENST00000434813 TESCQ96BS2 214 aa18.11■□□□□ 0.49
CLK1-205ENST00000434813 SLC6A13Q9NSD5 602 aa18.11■□□□□ 0.49
CLK1-205ENST00000434813 CXXC1Q9P0U4 656 aaPredicted RBP18.11■□□□□ 0.49
CLK1-205ENST00000434813 TMED5Q9Y3A6 229 aa18.11■□□□□ 0.49
CLK1-205ENST00000434813 CROCCQ5TZA2 2017 aa18.11■□□□□ 0.49
CLK1-205ENST00000434813 SERTM1A2A2V5 107 aa18.1■□□□□ 0.49
CLK1-205ENST00000434813 WASH3PC4AMC7 463 aa18.1■□□□□ 0.49
CLK1-205ENST00000434813 GFYI3L273 518 aa18.1■□□□□ 0.49
CLK1-205ENST00000434813 CYP2A7P20853 494 aa18.1■□□□□ 0.49
CLK1-205ENST00000434813 AP1S2P56377 157 aa18.1■□□□□ 0.49
CLK1-205ENST00000434813 PHC1P78364 1004 aa18.1■□□□□ 0.49
CLK1-205ENST00000434813 PTCHD3Q3KNS1 767 aa18.1■□□□□ 0.49
CLK1-205ENST00000434813 NEK5Q6P3R8 708 aa18.1■□□□□ 0.49
CLK1-205ENST00000434813 Q6ZVU0 165 aa18.1■□□□□ 0.49
CLK1-205ENST00000434813 DET1Q7L5Y6 550 aa18.1■□□□□ 0.49
CLK1-205ENST00000434813 ZDHHC13Q8IUH4 622 aa18.1■□□□□ 0.49
CLK1-205ENST00000434813 CLEC4FQ8N1N0 589 aa18.1■□□□□ 0.49
CLK1-205ENST00000434813 CHST14Q8NCH0 376 aa18.1■□□□□ 0.49
CLK1-205ENST00000434813 PNPT1Q8TCS8 783 aaKnown RBP18.1■□□□□ 0.49
CLK1-205ENST00000434813 SKA2Q8WVK7 121 aaPredicted RBP18.1■□□□□ 0.49
CLK1-205ENST00000434813 SDCCAG3Q96C92 435 aa18.1■□□□□ 0.49
CLK1-205ENST00000434813 RAD9AQ99638 391 aa18.1■□□□□ 0.49
CLK1-205ENST00000434813 CORO1BQ9BR76 489 aa18.1■□□□□ 0.49
CLK1-205ENST00000434813 MAGIXQ9H6Y5 334 aa18.1■□□□□ 0.49
CLK1-205ENST00000434813 RMND5AQ9H871 391 aa18.1■□□□□ 0.49
CLK1-205ENST00000434813 CCL26Q9Y258 94 aa18.1■□□□□ 0.49
CLK1-205ENST00000434813 PCDHB14Q9Y5E9 798 aa18.1■□□□□ 0.49
CLK1-205ENST00000434813 C16orf96A6NNT2 1141 aa18.1■□□□□ 0.49
CLK1-205ENST00000434813 KPNA5O15131 536 aa18.1■□□□□ 0.49
CLK1-205ENST00000434813 LINC00271P0C7V0 271 aa18.1■□□□□ 0.49
CLK1-205ENST00000434813 PABPC1P11940 636 aaKnown RBP18.1■□□□□ 0.49
CLK1-205ENST00000434813 ZNF30P17039 623 aa18.1■□□□□ 0.49
CLK1-205ENST00000434813 HOXB6P17509 224 aaKnown RBP18.1■□□□□ 0.49
CLK1-205ENST00000434813 SDC1P18827 310 aa18.1■□□□□ 0.49
CLK1-205ENST00000434813 S100A3P33764 101 aa18.1■□□□□ 0.49
CLK1-205ENST00000434813 TTKP33981 857 aa18.1■□□□□ 0.49
CLK1-205ENST00000434813 HLCSP50747 726 aa18.1■□□□□ 0.49
CLK1-205ENST00000434813 HNRNPFP52597 415 aaKnown RBP18.1■□□□□ 0.49
CLK1-205ENST00000434813 POLR2LP62875 67 aaKnown RBP18.1■□□□□ 0.49
CLK1-205ENST00000434813 LRRC73Q5JTD7 316 aa18.1■□□□□ 0.49
CLK1-205ENST00000434813 GDPD4Q6W3E5 623 aa18.1■□□□□ 0.49
CLK1-205ENST00000434813 NEK10Q6ZWH5 1172 aa18.1■□□□□ 0.49
CLK1-205ENST00000434813 STK32CQ86UX6 486 aa18.1■□□□□ 0.49
CLK1-205ENST00000434813 TMEM25Q86YD3 366 aa18.1■□□□□ 0.49
CLK1-205ENST00000434813 TMEM132CQ8N3T6 1108 aa18.1■□□□□ 0.49
CLK1-205ENST00000434813 SVOPLQ8N434 492 aa18.1■□□□□ 0.49
CLK1-205ENST00000434813 BEND7Q8N7W2 519 aaPredicted RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms