RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 ABRAXAS1Q6UWZ7 409 aa17.72■□□□□ 0.43
HMGN1-206ENST00000431390 LPCAT2Q7L5N7 544 aa17.72■□□□□ 0.43
HMGN1-206ENST00000431390 GOLGA7Q7Z5G4 137 aa17.72■□□□□ 0.43
HMGN1-206ENST00000431390 RGL4Q8IZJ4 473 aa17.72■□□□□ 0.43
HMGN1-206ENST00000431390 TEX9Q8N6V9 391 aa17.72■□□□□ 0.43
HMGN1-206ENST00000431390 TMEM168Q9H0V1 697 aa17.72■□□□□ 0.43
HMGN1-206ENST00000431390 TRIT1Q9H3H1 467 aaKnown RBP17.72■□□□□ 0.43
HMGN1-206ENST00000431390 MID1IP1Q9NPA3 183 aa17.72■□□□□ 0.43
HMGN1-206ENST00000431390 WDR37Q9Y2I8 494 aa17.72■□□□□ 0.43
HMGN1-206ENST00000431390 ANGPTL3Q9Y5C1 460 aa17.72■□□□□ 0.43
HMGN1-206ENST00000431390 PDZK1P1A8MUH7 402 aa17.71■□□□□ 0.43
HMGN1-206ENST00000431390 GIPC1O14908 333 aa17.71■□□□□ 0.43
HMGN1-206ENST00000431390 HDAC3O15379 428 aa17.71■□□□□ 0.43
HMGN1-206ENST00000431390 ESRRBO95718 433 aa17.71■□□□□ 0.43
HMGN1-206ENST00000431390 SLC16A8O95907 504 aa17.71■□□□□ 0.43
HMGN1-206ENST00000431390 MAOBP27338 520 aa17.71■□□□□ 0.43
HMGN1-206ENST00000431390 IMPA1P29218 277 aa17.71■□□□□ 0.43
HMGN1-206ENST00000431390 AQP5P55064 265 aa17.71■□□□□ 0.43
HMGN1-206ENST00000431390 ILF3Q12906 894 aaKnown RBP eCLIP17.71■□□□□ 0.43
HMGN1-206ENST00000431390 ZXDCQ2QGD7 858 aaPredicted RBP17.71■□□□□ 0.43
HMGN1-206ENST00000431390 PTCHD3Q3KNS1 767 aa17.71■□□□□ 0.43
HMGN1-206ENST00000431390 AGTRAPQ6RW13 159 aa17.71■□□□□ 0.43
HMGN1-206ENST00000431390 OR5AR1Q8NGP9 310 aa17.71■□□□□ 0.43
HMGN1-206ENST00000431390 AGR3Q8TD06 166 aa17.71■□□□□ 0.43
HMGN1-206ENST00000431390 GPBAR1Q8TDU6 330 aa17.71■□□□□ 0.43
HMGN1-206ENST00000431390 C12orf66Q96MD2 445 aa17.71■□□□□ 0.43
HMGN1-206ENST00000431390 INSM2Q96T92 566 aaPredicted RBP17.71■□□□□ 0.43
HMGN1-206ENST00000431390 TMEM120AQ9BXJ8 343 aa17.71■□□□□ 0.43
HMGN1-206ENST00000431390 MIR1-1HGQ9H1L0 117 aa17.71■□□□□ 0.43
HMGN1-206ENST00000431390 DNAJC28Q9NX36 388 aa17.71■□□□□ 0.43
HMGN1-206ENST00000431390 ZFHX4Q86UP3 3567 aa17.71■□□□□ 0.43
HMGN1-206ENST00000431390 CHD8Q9HCK8 2581 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 TLR4O00206 839 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 PPP6CO00743 305 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 ZNF195O14628 629 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 SCAMP1O15126 338 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 KATNA1O75449 491 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 OTCP00480 354 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 EPB42P16452 691 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 ACTR1BP42025 376 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 HALP42357 657 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 GDF5P43026 501 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 ACTR1AP61163 376 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 CCDC6Q16204 474 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 RBBP7Q16576 425 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 AASDHQ4L235 1098 aaPredicted RBP17.7■□□□□ 0.42
HMGN1-206ENST00000431390 HOMEZQ8IX15 550 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 PHACTR4Q8IZ21 702 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 CLYBLQ8N0X4 340 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 OR56A3Q8NH54 315 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 GAB3Q8WWW8 586 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 STON2Q8WXE9 905 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 GSDMCQ9BYG8 508 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 MVB12BQ9H7P6 319 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 NOL11Q9H8H0 719 aaKnown RBP17.7■□□□□ 0.42
HMGN1-206ENST00000431390 IPPKQ9H8X2 491 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 PRDM8Q9NQV8 689 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 TRAF6Q9Y4K3 522 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 HEBP2Q9Y5Z4 205 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 KRT87PA6NCN2 255 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 AZIN1O14977 448 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 WDR47O94967 919 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 AK4P27144 223 aaPredicted RBP17.7■□□□□ 0.42
HMGN1-206ENST00000431390 HSD17B2P37059 387 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 GRB7Q14451 532 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 ARHGAP19Q14CB8 494 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 CLCA4Q14CN2 919 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 SF3A2Q15428 464 aaKnown RBP17.7■□□□□ 0.42
HMGN1-206ENST00000431390 GPRIN3Q6ZVF9 776 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 MAVSQ7Z434 540 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 NRROSQ86YC3 692 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 CHCHD4Q8N4Q1 142 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 PHC3Q8NDX5 983 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 NTMT1Q9BV86 223 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 TNFRSF12AQ9NP84 129 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 DNAJC11Q9NVH1 559 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 SPATA7Q9P0W8 599 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 TBC1D29Q9UFV1 150 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 POLG2Q9UHN1 485 aa17.7■□□□□ 0.42
HMGN1-206ENST00000431390 CFAP20Q9Y6A4 193 aaKnown RBP17.7■□□□□ 0.42
HMGN1-206ENST00000431390 TNRC6BQ9UPQ9 1833 aaKnown RBP17.69■□□□□ 0.42
HMGN1-206ENST00000431390 USP24Q9UPU5 2620 aa17.69■□□□□ 0.42
HMGN1-206ENST00000431390 OR7A17O14581 309 aa17.69■□□□□ 0.42
HMGN1-206ENST00000431390 VILLO15195 856 aa17.69■□□□□ 0.42
HMGN1-206ENST00000431390 FOXD2O60548 495 aaPredicted RBP17.69■□□□□ 0.42
HMGN1-206ENST00000431390 ERGP11308 486 aa17.69■□□□□ 0.42
HMGN1-206ENST00000431390 MTHFD1P11586 935 aaKnown RBP17.69■□□□□ 0.42
HMGN1-206ENST00000431390 CCNG1P51959 295 aa17.69■□□□□ 0.42
HMGN1-206ENST00000431390 RPE65Q16518 533 aa17.69■□□□□ 0.42
HMGN1-206ENST00000431390 KANK2Q63ZY3 851 aa17.69■□□□□ 0.42
HMGN1-206ENST00000431390 PMS2CLQ68D20 193 aa17.69■□□□□ 0.42
HMGN1-206ENST00000431390 EPGNQ6UW88 154 aa17.69■□□□□ 0.42
HMGN1-206ENST00000431390 SYVN1Q86TM6 617 aa17.69■□□□□ 0.42
HMGN1-206ENST00000431390 OR52B6Q8NGF0 335 aa17.69■□□□□ 0.42
HMGN1-206ENST00000431390 CCL4L1Q8NHW4 92 aa17.69■□□□□ 0.42
HMGN1-206ENST00000431390 ZNF480Q8WV37 535 aa17.69■□□□□ 0.42
HMGN1-206ENST00000431390 ATP6V1E2Q96A05 226 aa17.69■□□□□ 0.42
HMGN1-206ENST00000431390 FERD3LQ96RJ6 166 aa17.69■□□□□ 0.42
HMGN1-206ENST00000431390 ATG10Q9H0Y0 220 aa17.69■□□□□ 0.42
HMGN1-206ENST00000431390 ARRDC1-AS1Q9H2J1 176 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms