RNA–Protein interactions for RNA: ENST00000429662.6

GABPB1-205, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene GABPB1, Length 1,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-205ENST00000429662 IPPKQ9H8X2 491 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 LIN28AQ9H9Z2 209 aaKnown RBP8.51□□□□□ -1.05
GABPB1-205ENST00000429662 LATS2Q9NRM7 1088 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 FAM118AQ9NWS6 357 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 IL17CQ9P0M4 197 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 OPTCQ9UBM4 332 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 NIPSNAP3AQ9UFN0 247 aaPredicted RBP8.51□□□□□ -1.05
GABPB1-205ENST00000429662 ADGRE2Q9UHX3 823 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 PRG3Q9Y2Y8 225 aaPredicted RBP8.51□□□□□ -1.05
GABPB1-205ENST00000429662 MRPL42Q9Y6G3 142 aaKnown RBP8.51□□□□□ -1.05
GABPB1-205ENST00000429662 GCN1Q92616 2671 aaKnown RBP8.51□□□□□ -1.05
GABPB1-205ENST00000429662 DOCK4Q8N1I0 1966 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 MYO16Q9Y6X6 1858 aa8.51□□□□□ -1.05
GABPB1-205ENST00000429662 ABHD14A-ACY1A0A1B0GW23 586 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 SERTM1A2A2V5 107 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 C9JVG2 144 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 F8W810 466 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 K7EPI3 171 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 CXCR6O00574 342 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 OR7A17O14581 309 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 SLC16A6O15403 523 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 FZD6O60353 706 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 UGT2B11O75310 529 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 ULK1O75385 1050 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 GJB3O75712 270 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 CST1P01037 141 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 KRT6AP02538 564 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 KRT6BP04259 564 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 HNRNPCP07910 306 aaKnown RBP eCLIP8.5□□□□□ -1.05
GABPB1-205ENST00000429662 INHBBP09529 407 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 PRSS56P0CW18 603 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 ITGAMP11215 1152 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 ITIH1P19827 911 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 ITGALP20701 1170 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 SLC6A4P31645 630 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 STT3AP46977 705 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 RGRP47804 291 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 NRIP1P48552 1158 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 KRT6CP48668 564 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 CSNK1DP48730 415 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 ARHGDIAP52565 204 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 ZNF33BQ06732 778 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 ABRQ12979 859 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 TRAF3Q13114 568 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 IMPG1Q17R60 797 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 GPR33Q49SQ1 333 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 C6orf141Q5SZD1 244 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 OTUD3Q5T2D3 398 aaPredicted RBP8.5□□□□□ -1.05
GABPB1-205ENST00000429662 ADGRF1Q5T601 910 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 ARMC12Q5T9G4 340 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 ANKRD26P1Q6NSI1 321 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 C16orf87Q6PH81 154 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 ELMSAN1Q6PJG2 1045 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 SCIMPQ6UWF3 145 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 MACC1Q6ZN28 852 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 TMEM26Q6ZUK4 368 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 SNX20Q7Z614 316 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 GPR149Q86SP6 731 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 RALGPS2Q86X27 583 aaPredicted RBP8.5□□□□□ -1.05
GABPB1-205ENST00000429662 MICU2Q8IYU8 434 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 OFCC1Q8IZS5 231 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 CFAP52Q8N1V2 620 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 CBARPQ8N350 705 aaPredicted RBP8.5□□□□□ -1.05
GABPB1-205ENST00000429662 TMEM132CQ8N3T6 1108 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 ZCCHC7Q8N3Z6 543 aaKnown RBP8.5□□□□□ -1.05
GABPB1-205ENST00000429662 MINDY2Q8NBR6 621 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 ZNF548Q8NEK5 533 aaPredicted RBP8.5□□□□□ -1.05
GABPB1-205ENST00000429662 OR52B6Q8NGF0 335 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 SLC22A17Q8WUG5 538 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 S100ZQ8WXG8 99 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 GTF2H4Q92759 462 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 ZNF566Q969W8 418 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 PLEKHA8Q96JA3 519 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 NSMCE3Q96MG7 304 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 PPM1MQ96MI6 270 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 DCUN1D5Q9BTE7 237 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 THUMPD3Q9BV44 507 aaKnown RBP8.5□□□□□ -1.05
GABPB1-205ENST00000429662 MRPL9Q9BYD2 267 aaKnown RBP8.5□□□□□ -1.05
GABPB1-205ENST00000429662 GPR63Q9BZJ6 419 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 CD244Q9BZW8 370 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 ACTL8Q9H568 366 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 ACTR8Q9H981 624 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 FANCEQ9HB96 536 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 RC3H2Q9HBD1 1191 aaKnown RBP8.5□□□□□ -1.05
GABPB1-205ENST00000429662 LRTM1Q9HBL6 345 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 GIN1Q9NXP7 522 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 DLL3Q9NYJ7 618 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 SLAMF8Q9P0V8 285 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 LIMD1Q9UGP4 676 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 STOML2Q9UJZ1 356 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 RALYQ9UKM9 306 aaKnown RBP8.5□□□□□ -1.05
GABPB1-205ENST00000429662 ERVW-1Q9UQF0 538 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 PDE10AQ9Y233 779 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 MAN2B2Q9Y2E5 1009 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 TMED5Q9Y3A6 229 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 CCL27Q9Y4X3 112 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 POLR3HQ9Y535 204 aaPredicted RBP8.5□□□□□ -1.05
GABPB1-205ENST00000429662 PCDHB7Q9Y5E2 793 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 PCDHGB1Q9Y5G3 927 aa8.5□□□□□ -1.05
GABPB1-205ENST00000429662 AP1M2Q9Y6Q5 423 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms