RNA–Protein interactions for RNA: ENST00000428599.6

CTNND1-208, Transcript of catenin delta 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNND1, Length 6,016 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-208ENST00000428599 TCAF1Q9Y4C2 921 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 GNB5O14775 395 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 WNT9AO14904 365 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 MATN3O15232 486 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 UNC5CO95185 931 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 ESR1P03372 595 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 DNAJA1P31689 397 aaKnown RBP8.77□□□□□ -1.01
CTNND1-208ENST00000428599 GBX2P52951 348 aaPredicted RBP8.77□□□□□ -1.01
CTNND1-208ENST00000428599 XIAPP98170 497 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 FOLH1Q04609 750 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 NFATC2Q13469 925 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 MTX3Q5HYI7 312 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 ZNF613Q6PF04 617 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 LINGO2Q7L985 606 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 LRRC70Q7Z2Q7 622 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 RALGPS2Q86X27 583 aaPredicted RBP8.77□□□□□ -1.01
CTNND1-208ENST00000428599 PROKR2Q8NFJ6 384 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 OR7D4Q8NG98 312 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 ZNF570Q96NI8 536 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 PHF12Q96QT6 1004 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 LDHAL6BQ9BYZ2 381 aaPredicted RBP8.77□□□□□ -1.01
CTNND1-208ENST00000428599 BTBD1Q9H0C5 482 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 DOT1LQ8TEK3 1739 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 DAPL1A0PJW8 107 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 A6NCN8 305 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 ADH5P11766 374 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 MMP8P22894 467 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 ZNF41P51814 821 aaPredicted RBP8.77□□□□□ -1.01
CTNND1-208ENST00000428599 MRPL49Q13405 166 aaKnown RBP8.77□□□□□ -1.01
CTNND1-208ENST00000428599 AUHQ13825 339 aaKnown RBP8.77□□□□□ -1.01
CTNND1-208ENST00000428599 ZNF234Q14588 700 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 ANO7Q6IWH7 933 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 PRSS55Q6UWB4 352 aaPredicted RBP8.77□□□□□ -1.01
CTNND1-208ENST00000428599 ARMCX6Q7L4S7 300 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 NUDT13Q86X67 352 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 SPPL2CQ8IUH8 684 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 GHDCQ8N2G8 530 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 ZNF565Q8N9K5 539 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 BORCS8Q96FH0 119 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 CAMK1GQ96NX5 476 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 FAM124BQ9H5Z6 455 aaPredicted RBP8.77□□□□□ -1.01
CTNND1-208ENST00000428599 STXBP5LQ9Y2K9 1186 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 PCDHGC4Q9Y5F7 938 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 LRP6O75581 1613 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 ZNF878C9JN71 531 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 MFSD11O43934 449 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 ITGA10O75578 1167 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 IFNA21P01568 189 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 ZNF3P17036 446 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 APLP1P51693 650 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 FOXK1P85037 733 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 SIM2Q14190 667 aaPredicted RBP8.77□□□□□ -1.01
CTNND1-208ENST00000428599 NOMO1Q15155 1222 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 SLC10A6Q3KNW5 377 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 SPIN3Q5JUX0 258 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 IRF2BP1Q8IU81 584 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 OR2T34Q8NGX1 318 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 OR2T3Q8NH03 318 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 CNDP2Q96KP4 475 aaKnown RBP8.77□□□□□ -1.01
CTNND1-208ENST00000428599 TBATAQ96M53 351 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 ZNF347Q96SE7 839 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 GMLQ99445 158 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 OSBPL2Q9H1P3 480 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 ADAP2Q9NPF8 381 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 WRAP73Q9P2S5 460 aaPredicted RBP8.77□□□□□ -1.01
CTNND1-208ENST00000428599 TMPRSS11EQ9UL52 423 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 INSL6Q9Y581 213 aa8.77□□□□□ -1.01
CTNND1-208ENST00000428599 ARFGEF2Q9Y6D5 1785 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 SPEF2Q9C093 1822 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 ADAMTS3O15072 1205 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 VEGFDO43915 354 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 GOT2P00505 430 aaKnown RBP8.76□□□□□ -1.01
CTNND1-208ENST00000428599 ZNF8P17098 575 aaPredicted RBP8.76□□□□□ -1.01
CTNND1-208ENST00000428599 ITIH1P19827 911 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 RFTN1Q14699 578 aaPredicted RBP8.76□□□□□ -1.01
CTNND1-208ENST00000428599 RAB43Q86YS6 212 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 NATD1Q8N6N6 113 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 SPERTQ8NA61 448 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 LRRN4CLQ8ND94 238 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 DENND6BQ8NEG7 585 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 LMX1AQ8TE12 382 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 SH3RF2Q8TEC5 729 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 EMID1Q96A84 441 aaPredicted RBP8.76□□□□□ -1.01
CTNND1-208ENST00000428599 CENPMQ9NSP4 180 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 SERTAD3Q9UJW9 196 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 TIMM22Q9Y584 194 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 C5orf51A6NDU8 294 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 A8MU76 341 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 A8MUI8 341 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 GADD45GO95257 159 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 PGLSO95336 258 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 BPGMP07738 259 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 ACP5P13686 325 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 MPSTP25325 297 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 TNFRSF8P28908 595 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 HNRNPH3P31942 346 aaKnown RBP8.76□□□□□ -1.01
CTNND1-208ENST00000428599 CRHR1P34998 444 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 PAMR1Q6UXH9 720 aa8.76□□□□□ -1.01
CTNND1-208ENST00000428599 LRRC69Q6ZNQ3 347 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms