RNA–Protein interactions for RNA: ENST00000427724.6

TCOF1-204, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5

Gene TCOF1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-204ENST00000427724 KCTD14Q9BQ13 255 aaPredicted RBP10.43□□□□□ -0.74
TCOF1-204ENST00000427724 SCHIP1Q9P0W5 487 aaPredicted RBP10.43□□□□□ -0.74
TCOF1-204ENST00000427724 BLOC1S6Q9UL45 172 aa10.43□□□□□ -0.74
TCOF1-204ENST00000427724 FOXD2O60548 495 aaPredicted RBP10.42□□□□□ -0.74
TCOF1-204ENST00000427724 PENKP01210 267 aaPredicted RBP10.42□□□□□ -0.74
TCOF1-204ENST00000427724 FGF3P11487 239 aaPredicted RBP10.42□□□□□ -0.74
TCOF1-204ENST00000427724 CD38P28907 300 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 CCR10P46092 362 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 TAS2R39P59534 338 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 HYAL2Q12891 473 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 PWP1Q13610 501 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 ZBTB6Q15916 424 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 CCSAPQ6IQ19 270 aaPredicted RBP10.42□□□□□ -0.74
TCOF1-204ENST00000427724 KIAA1211LQ6NV74 962 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 GATAD2AQ86YP4 633 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 FAM9CQ8IZT9 166 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 EID2Q8N6I1 236 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 ZNF555Q8NEP9 628 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 ACTRT2Q8TDY3 377 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 OCEL1Q9H607 264 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 CLK4Q9HAZ1 481 aaKnown RBP10.42□□□□□ -0.74
TCOF1-204ENST00000427724 PNPLA3Q9NST1 481 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 WDR37Q9Y2I8 494 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 CCDC162PA2VCL2 907 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 FAM221BA6H8Z2 402 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 STATHP02808 62 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 ATP6V1B2P21281 511 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 NR4A1P22736 598 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 HNF1BP35680 557 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 LSM3P62310 102 aaKnown RBP10.42□□□□□ -0.74
TCOF1-204ENST00000427724 SLC7A9P82251 487 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 HECTD2Q5U5R9 776 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 Q6ZSR6 202 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 SNX20Q7Z614 316 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 ZMIZ2Q8NF64 920 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 ZNF641Q96N77 438 aaPredicted RBP10.42□□□□□ -0.74
TCOF1-204ENST00000427724 SH3GL1Q99961 368 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 CNPPD1Q9BV87 410 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 BRINP2Q9C0B6 783 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 RERGLQ9H628 205 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 SNX6Q9UNH7 406 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 GPR179Q6PRD1 2367 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 NBASA2RRP1 2371 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 TMEM233B4DJY2 109 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 PTGES3LE9PB15 166 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 C6P13671 934 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 PFKLP17858 780 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 ITPKBP27987 946 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 ADAM17P78536 824 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 CHRNB3Q05901 458 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 ELOAQ14241 798 aaKnown RBP10.42□□□□□ -0.74
TCOF1-204ENST00000427724 COLEC12Q5KU26 742 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 C1orf53Q5VUE5 145 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 CLEC6AQ6EIG7 209 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 CUZD1Q86UP6 607 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 PGAM4Q8N0Y7 254 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 RDH11Q8TC12 318 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 BCL7CQ8WUZ0 217 aaPredicted RBP10.42□□□□□ -0.74
TCOF1-204ENST00000427724 LPGAT1Q92604 370 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 FGF14Q92915 247 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 SLC22A18Q96BI1 424 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 PCDHAC1Q9H158 963 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 ARMC7Q9H6L4 198 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 KCNK13Q9HB14 408 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 TCAF1Q9Y4C2 921 aa10.42□□□□□ -0.74
TCOF1-204ENST00000427724 J3QRK9 145 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 TP73O15350 636 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 MBTPS2O43462 519 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 PRMT3O60678 531 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 CNOT3O75175 753 aaKnown RBP10.41□□□□□ -0.74
TCOF1-204ENST00000427724 EGFP01133 1207 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 ADRB3P13945 408 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 HGFP14210 728 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 INPP1P49441 399 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 MSLNQ13421 630 aaPredicted RBP10.41□□□□□ -0.74
TCOF1-204ENST00000427724 TRIM25Q14258 630 aaKnown RBP10.41□□□□□ -0.74
TCOF1-204ENST00000427724 SQLEQ14534 574 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 CDKN3Q16667 212 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 ZYG11AQ6WRX3 759 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 ZNF621Q6ZSS3 439 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 BNIPLQ7Z465 357 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 ADCY4Q8NFM4 1077 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 OR2T34Q8NGX1 318 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 MAGEE2Q8TD90 523 aaPredicted RBP10.41□□□□□ -0.74
TCOF1-204ENST00000427724 FBXL8Q96CD0 374 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 REXO5Q96IC2 774 aaKnown RBP10.41□□□□□ -0.74
TCOF1-204ENST00000427724 ZSWIM3Q96MP5 696 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 CCDC106Q9BWC9 280 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 TUBA8Q9NY65 449 aaPredicted RBP10.41□□□□□ -0.74
TCOF1-204ENST00000427724 POLG2Q9UHN1 485 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 CER1O95813 267 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 F11P03951 625 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 SRCP12931 536 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 IGFBP6P24592 240 aaPredicted RBP10.41□□□□□ -0.74
TCOF1-204ENST00000427724 HOXA9P31269 272 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 CLK3P49761 638 aaKnown RBP10.41□□□□□ -0.74
TCOF1-204ENST00000427724 RAD23AP54725 363 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 ALDH6A1Q02252 535 aaKnown RBP10.41□□□□□ -0.74
TCOF1-204ENST00000427724 SLC13A2Q13183 592 aa10.41□□□□□ -0.74
TCOF1-204ENST00000427724 ARHGAP40Q5TG30 622 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms