RNA–Protein interactions for RNA: ENST00000425562.6

LRCH3-203, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene LRCH3, Length 2,970 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-203ENST00000425562 DNASE1L2Q92874 299 aa13.18□□□□□ -0.3
LRCH3-203ENST00000425562 CDKN2AIPNLQ96HQ2 116 aa13.18□□□□□ -0.3
LRCH3-203ENST00000425562 TPD52L3Q96J77 140 aa13.18□□□□□ -0.3
LRCH3-203ENST00000425562 ASB2Q96Q27 587 aa13.18□□□□□ -0.3
LRCH3-203ENST00000425562 ADAM2Q99965 735 aa13.18□□□□□ -0.3
LRCH3-203ENST00000425562 CENPOQ9BU64 300 aa13.18□□□□□ -0.3
LRCH3-203ENST00000425562 SPON2Q9BUD6 331 aa13.18□□□□□ -0.3
LRCH3-203ENST00000425562 DPY30Q9C005 99 aa13.18□□□□□ -0.3
LRCH3-203ENST00000425562 TFB2MQ9H5Q4 396 aaKnown RBP13.18□□□□□ -0.3
LRCH3-203ENST00000425562 NECTIN3Q9NQS3 549 aa13.18□□□□□ -0.3
LRCH3-203ENST00000425562 ABCC13Q9NSE7 274 aa13.18□□□□□ -0.3
LRCH3-203ENST00000425562 THG1LQ9NWX6 298 aaKnown RBP13.18□□□□□ -0.3
LRCH3-203ENST00000425562 TRPV2Q9Y5S1 764 aa13.18□□□□□ -0.3
LRCH3-203ENST00000425562 SMIM30A4D0T7 59 aa13.18□□□□□ -0.3
LRCH3-203ENST00000425562 KRT87PA6NCN2 255 aa13.18□□□□□ -0.3
LRCH3-203ENST00000425562 E2F3O00716 465 aa13.18□□□□□ -0.3
LRCH3-203ENST00000425562 HOXC11O43248 304 aaPredicted RBP13.18□□□□□ -0.3
LRCH3-203ENST00000425562 PCDHGA12O60330 932 aa13.18□□□□□ -0.3
LRCH3-203ENST00000425562 SLC10A3P09131 477 aa13.18□□□□□ -0.3
LRCH3-203ENST00000425562 PRR35P0CG20 571 aa13.18□□□□□ -0.3
LRCH3-203ENST00000425562 BMP1P13497 986 aa13.18□□□□□ -0.3
LRCH3-203ENST00000425562 GABARAPL2P60520 117 aa13.18□□□□□ -0.3
LRCH3-203ENST00000425562 CCDC58Q4VC31 144 aa13.18□□□□□ -0.3
LRCH3-203ENST00000425562 LYPD8Q6UX82 237 aa13.18□□□□□ -0.3
LRCH3-203ENST00000425562 CD300LGQ6UXG3 332 aa13.18□□□□□ -0.3
LRCH3-203ENST00000425562 REM2Q8IYK8 340 aaPredicted RBP13.18□□□□□ -0.3
LRCH3-203ENST00000425562 OR52J3Q8NH60 311 aa13.18□□□□□ -0.3
LRCH3-203ENST00000425562 GTF3C2Q8WUA4 911 aaPredicted RBP13.18□□□□□ -0.3
LRCH3-203ENST00000425562 IGSF8Q969P0 613 aa13.18□□□□□ -0.3
LRCH3-203ENST00000425562 ACBD6Q9BR61 282 aa13.18□□□□□ -0.3
LRCH3-203ENST00000425562 TYW5A2RUC4 315 aaKnown RBP13.17□□□□□ -0.3
LRCH3-203ENST00000425562 AGAP5A6NIR3 686 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 CELF2O95319 508 aaKnown RBP13.17□□□□□ -0.3
LRCH3-203ENST00000425562 COL6A1P12109 1028 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 TGM4P49221 684 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 CYP27C1Q4G0S4 372 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 COQ5Q5HYK3 327 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 FAM209AQ5JX71 171 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 ATAD3CQ5T2N8 411 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 ARTNQ5T4W7 220 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 KLHDC9Q8NEP7 349 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 TRIB2Q92519 343 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 TXNDC15Q96J42 360 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 IPPKQ9H8X2 491 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 SIRT5Q9NXA8 310 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 PAQR5Q9NXK6 330 aaPredicted RBP13.17□□□□□ -0.3
LRCH3-203ENST00000425562 ZIM2Q9NZV7 527 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 VPS4BO75351 444 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 IGLV3-25P01717 112 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 TNFRSF1BP20333 461 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 CYP2C18P33260 490 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 S100A5P33763 92 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 CDKN2CP42773 168 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 OR2B6P58173 313 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 ZNF235Q14590 738 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 BCL7AQ4VC05 210 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 ZNF598Q86UK7 904 aaKnown RBP13.17□□□□□ -0.3
LRCH3-203ENST00000425562 ZNF280BQ86YH2 543 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 RASAL3Q86YV0 1011 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 ATP6V0D2Q8N8Y2 350 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 ATAD1Q8NBU5 361 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 PJA1Q8NG27 643 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 ARRDC2Q8TBH0 407 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 PHF10Q8WUB8 498 aaKnown RBP13.17□□□□□ -0.3
LRCH3-203ENST00000425562 EGFL8Q99944 293 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 TMEM246Q9BRR3 403 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 USE1Q9NZ43 259 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 TRMT6Q9UJA5 497 aaKnown RBP13.17□□□□□ -0.3
LRCH3-203ENST00000425562 MOSPD1Q9UJG1 213 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 SAMHD1Q9Y3Z3 626 aaKnown RBP13.17□□□□□ -0.3
LRCH3-203ENST00000425562 RPP40O75818 363 aaKnown RBP13.17□□□□□ -0.3
LRCH3-203ENST00000425562 PGRP06401 933 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 CCDC159P0C7I6 412 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 POU2F1P14859 743 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 AKT1P31749 480 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 TGFBR2P37173 567 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 ZMAT1Q5H9K5 638 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 LRRC49Q8IUZ0 686 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 RNF175Q8N4F7 328 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 SREK1IP1Q8N9Q2 155 aaPredicted RBP13.17□□□□□ -0.3
LRCH3-203ENST00000425562 REXO5Q96IC2 774 aaKnown RBP13.17□□□□□ -0.3
LRCH3-203ENST00000425562 SPATA17Q96L03 361 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 RPRD1AQ96P16 312 aaPredicted RBP13.17□□□□□ -0.3
LRCH3-203ENST00000425562 DEPDC7Q96QD5 511 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 NUAK2Q9H093 628 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 EHD3Q9NZN3 535 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 AFF4Q9UHB7 1163 aaKnown RBP13.17□□□□□ -0.3
LRCH3-203ENST00000425562 FKBPLQ9UIM3 349 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 ZNF221Q9UK13 617 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 NOD1Q9Y239 953 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 PCDHGC4Q9Y5F7 938 aa13.17□□□□□ -0.3
LRCH3-203ENST00000425562 A0A0D9SEW6 157 aa13.16□□□□□ -0.3
LRCH3-203ENST00000425562 A8MX80 341 aa13.16□□□□□ -0.3
LRCH3-203ENST00000425562 TLL1O43897 1013 aa13.16□□□□□ -0.3
LRCH3-203ENST00000425562 HPRP00739 348 aa13.16□□□□□ -0.3
LRCH3-203ENST00000425562 TOP3AQ13472 1001 aaPredicted RBP13.16□□□□□ -0.3
LRCH3-203ENST00000425562 CPSF6Q16630 551 aaKnown RBP eCLIP13.16□□□□□ -0.3
LRCH3-203ENST00000425562 MANEALQ5VSG8 457 aa13.16□□□□□ -0.3
LRCH3-203ENST00000425562 SPRYD7Q5W111 196 aa13.16□□□□□ -0.3
LRCH3-203ENST00000425562 CPZQ66K79 652 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms