RNA–Protein interactions for RNA: ENST00000425444.1

SGCE-203, Transcript of sarcoglycan epsilon, humanhuman

TSL 3

Gene SGCE, Length 597 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-203ENST00000425444 COG1Q8WTW3 980 aa12.3□□□□□ -0.44
SGCE-203ENST00000425444 ASZ1Q8WWH4 475 aa12.3□□□□□ -0.44
SGCE-203ENST00000425444 ZNF501Q96CX3 271 aaPredicted RBP12.3□□□□□ -0.44
SGCE-203ENST00000425444 MFSD3Q96ES6 412 aa12.3□□□□□ -0.44
SGCE-203ENST00000425444 PANX3Q96QZ0 392 aa12.3□□□□□ -0.44
SGCE-203ENST00000425444 KIFC1Q9BW19 673 aa12.3□□□□□ -0.44
SGCE-203ENST00000425444 CARD6Q9BX69 1037 aa12.3□□□□□ -0.44
SGCE-203ENST00000425444 KLHL25Q9H0H3 589 aa12.3□□□□□ -0.44
SGCE-203ENST00000425444 KCNF1Q9H3M0 494 aa12.3□□□□□ -0.44
SGCE-203ENST00000425444 PLAGL1Q9UM63 463 aa12.3□□□□□ -0.44
SGCE-203ENST00000425444 SOX13Q9UN79 622 aa12.3□□□□□ -0.44
SGCE-203ENST00000425444 ICKQ9UPZ9 632 aa12.3□□□□□ -0.44
SGCE-203ENST00000425444 SLC5A6Q9Y289 635 aa12.3□□□□□ -0.44
SGCE-203ENST00000425444 BTRCQ9Y297 605 aa12.3□□□□□ -0.44
SGCE-203ENST00000425444 PIPSLA2A3N6 862 aa12.29□□□□□ -0.44
SGCE-203ENST00000425444 CDC14CA4D256 554 aa12.29□□□□□ -0.44
SGCE-203ENST00000425444 BHMG1C9JSJ3 638 aaPredicted RBP12.29□□□□□ -0.44
SGCE-203ENST00000425444 GOLGA8KD6RF30 607 aa12.29□□□□□ -0.44
SGCE-203ENST00000425444 GOLGA8TH3BQL2 631 aa12.29□□□□□ -0.44
SGCE-203ENST00000425444 GOLGA8MH3BSY2 632 aa12.29□□□□□ -0.44
SGCE-203ENST00000425444 CPNE3O75131 537 aaKnown RBP12.29□□□□□ -0.44
SGCE-203ENST00000425444 AVILO75366 819 aa12.29□□□□□ -0.44
SGCE-203ENST00000425444 TMEM63AO94886 807 aa12.29□□□□□ -0.44
SGCE-203ENST00000425444 RPN2P04844 631 aa12.29□□□□□ -0.44
SGCE-203ENST00000425444 ST6GAL1P15907 406 aa12.29□□□□□ -0.44
SGCE-203ENST00000425444 MAGEA6P43360 314 aa12.29□□□□□ -0.44
SGCE-203ENST00000425444 FNTAP49354 379 aa12.29□□□□□ -0.44
SGCE-203ENST00000425444 PGDP52209 483 aa12.29□□□□□ -0.44
SGCE-203ENST00000425444 EIF3BP55884 814 aaKnown RBP12.29□□□□□ -0.44
SGCE-203ENST00000425444 CYP1B1Q16678 543 aa12.29□□□□□ -0.44
SGCE-203ENST00000425444 DNAJC21Q5F1R6 531 aaKnown RBP12.29□□□□□ -0.44
SGCE-203ENST00000425444 RNF187Q5TA31 235 aaPredicted RBP12.29□□□□□ -0.44
SGCE-203ENST00000425444 SPESP1Q6UW49 350 aa12.29□□□□□ -0.44
SGCE-203ENST00000425444 UNC5AQ6ZN44 842 aa12.29□□□□□ -0.44
SGCE-203ENST00000425444 TMEM135Q86UB9 458 aa12.29□□□□□ -0.44
SGCE-203ENST00000425444 TRIM73Q86UV7 250 aa12.29□□□□□ -0.44
SGCE-203ENST00000425444 LRRC6Q86X45 466 aa12.29□□□□□ -0.44
SGCE-203ENST00000425444 SLC22A15Q8IZD6 547 aa12.29□□□□□ -0.44
SGCE-203ENST00000425444 ADGRF3Q8IZF5 1079 aa12.29□□□□□ -0.44
SGCE-203ENST00000425444 OR8K5Q8NH50 307 aa12.29□□□□□ -0.44
SGCE-203ENST00000425444 ACTRT1Q8TDG2 376 aa12.29□□□□□ -0.44
SGCE-203ENST00000425444 SKA2Q8WVK7 121 aaPredicted RBP12.29□□□□□ -0.44
SGCE-203ENST00000425444 CPT1BQ92523 772 aa12.29□□□□□ -0.44
SGCE-203ENST00000425444 N4BP2L2Q92802 583 aaPredicted RBP12.29□□□□□ -0.44
SGCE-203ENST00000425444 FCRL4Q96PJ5 515 aa12.29□□□□□ -0.44
SGCE-203ENST00000425444 UNKQ9C0B0 810 aaKnown RBP12.29□□□□□ -0.44
SGCE-203ENST00000425444 SLC7A5P2Q9GIP4 190 aa12.29□□□□□ -0.44
SGCE-203ENST00000425444 XAB2Q9HCS7 855 aaKnown RBP12.29□□□□□ -0.44
SGCE-203ENST00000425444 LHX9Q9NQ69 397 aa12.29□□□□□ -0.44
SGCE-203ENST00000425444 KCND1Q9NSA2 647 aa12.29□□□□□ -0.44
SGCE-203ENST00000425444 KCND3Q9UK17 655 aa12.29□□□□□ -0.44
SGCE-203ENST00000425444 PADI1Q9ULC6 663 aa12.29□□□□□ -0.44
SGCE-203ENST00000425444 SNX12Q9UMY4 172 aa12.29□□□□□ -0.44
SGCE-203ENST00000425444 PIKFYVEQ9Y2I7 2098 aa12.28□□□□□ -0.44
SGCE-203ENST00000425444 ISM1B1AKI9 464 aa12.28□□□□□ -0.44
SGCE-203ENST00000425444 TMEM150CB9EJG8 249 aa12.28□□□□□ -0.44
SGCE-203ENST00000425444 CES2O00748 559 aa12.28□□□□□ -0.44
SGCE-203ENST00000425444 ZNF185O15231 689 aa12.28□□□□□ -0.44
SGCE-203ENST00000425444 CHRM5P08912 532 aaPredicted RBP12.28□□□□□ -0.44
SGCE-203ENST00000425444 PVRP15151 417 aa12.28□□□□□ -0.44
SGCE-203ENST00000425444 CYP2A7P20853 494 aa12.28□□□□□ -0.44
SGCE-203ENST00000425444 ABRQ12979 859 aa12.28□□□□□ -0.44
SGCE-203ENST00000425444 DNASE1L3Q13609 305 aa12.28□□□□□ -0.44
SGCE-203ENST00000425444 PPP1R7Q15435 360 aa12.28□□□□□ -0.44
SGCE-203ENST00000425444 KIAA0930Q6ICG6 404 aaPredicted RBP12.28□□□□□ -0.44
SGCE-203ENST00000425444 TTC23LQ6PF05 361 aa12.28□□□□□ -0.44
SGCE-203ENST00000425444 OTOAQ7RTW8 1153 aa12.28□□□□□ -0.44
SGCE-203ENST00000425444 VRK3Q8IV63 474 aa12.28□□□□□ -0.44
SGCE-203ENST00000425444 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.28□□□□□ -0.44
SGCE-203ENST00000425444 CT55Q8WUE5 264 aa12.28□□□□□ -0.44
SGCE-203ENST00000425444 ZNF669Q96BR6 464 aaPredicted RBP12.28□□□□□ -0.44
SGCE-203ENST00000425444 SERPINB12Q96P63 405 aa12.28□□□□□ -0.44
SGCE-203ENST00000425444 TRAPPC9Q96Q05 1148 aa12.28□□□□□ -0.44
SGCE-203ENST00000425444 PITPNM3Q9BZ71 974 aa12.28□□□□□ -0.44
SGCE-203ENST00000425444 TWSG1Q9GZX9 223 aa12.28□□□□□ -0.44
SGCE-203ENST00000425444 P2RY12Q9H244 342 aa12.28□□□□□ -0.44
SGCE-203ENST00000425444 SYTL2Q9HCH5 934 aa12.28□□□□□ -0.44
SGCE-203ENST00000425444 OR6C2Q9NZP2 312 aa12.28□□□□□ -0.44
SGCE-203ENST00000425444 LUZP4Q9P127 313 aa12.28□□□□□ -0.44
SGCE-203ENST00000425444 A0A0J9YY10 115 aa12.27□□□□□ -0.45
SGCE-203ENST00000425444 C21orf140B9A014 251 aa12.27□□□□□ -0.45
SGCE-203ENST00000425444 KPNA5O15131 536 aa12.27□□□□□ -0.45
SGCE-203ENST00000425444 GPC4O75487 556 aa12.27□□□□□ -0.45
SGCE-203ENST00000425444 MLNP12872 115 aa12.27□□□□□ -0.45
SGCE-203ENST00000425444 UGT2B7P16662 529 aa12.27□□□□□ -0.45
SGCE-203ENST00000425444 TCP1P17987 556 aaKnown RBP12.27□□□□□ -0.45
SGCE-203ENST00000425444 OGNP20774 298 aaKnown RBP12.27□□□□□ -0.45
SGCE-203ENST00000425444 RPS3P23396 243 aaKnown RBP eCLIP12.27□□□□□ -0.45
SGCE-203ENST00000425444 ARNTP27540 789 aa12.27□□□□□ -0.45
SGCE-203ENST00000425444 AOAHP28039 575 aa12.27□□□□□ -0.45
SGCE-203ENST00000425444 FMO4P31512 558 aa12.27□□□□□ -0.45
SGCE-203ENST00000425444 RAB28P51157 221 aa12.27□□□□□ -0.45
SGCE-203ENST00000425444 THOC5Q13769 683 aaKnown RBP12.27□□□□□ -0.45
SGCE-203ENST00000425444 DHX34Q14147 1143 aaKnown RBP12.27□□□□□ -0.45
SGCE-203ENST00000425444 UNC5DQ6UXZ4 953 aa12.27□□□□□ -0.45
SGCE-203ENST00000425444 CAND1Q86VP6 1230 aaKnown RBP12.27□□□□□ -0.45
SGCE-203ENST00000425444 DCUN1D3Q8IWE4 304 aa12.27□□□□□ -0.45
SGCE-203ENST00000425444 MCEMP1Q8IX19 187 aa12.27□□□□□ -0.45
SGCE-203ENST00000425444 C19orf47Q8N9M1 422 aaKnown RBP12.27□□□□□ -0.45
SGCE-203ENST00000425444 MCUQ8NE86 351 aa12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms