RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 RGS4P49798 205 aa15.24■□□□□ 0.03
SHOX2-202ENST00000425436 ILF3Q12906 894 aaKnown RBP eCLIP15.24■□□□□ 0.03
SHOX2-202ENST00000425436 SNCBQ16143 134 aa15.24■□□□□ 0.03
SHOX2-202ENST00000425436 CTSL3PQ5NE16 218 aa15.24■□□□□ 0.03
SHOX2-202ENST00000425436 SFTPA2Q8IWL1 248 aa15.24■□□□□ 0.03
SHOX2-202ENST00000425436 CPSF7Q8N684 471 aaKnown RBP15.24■□□□□ 0.03
SHOX2-202ENST00000425436 TEX9Q8N6V9 391 aa15.24■□□□□ 0.03
SHOX2-202ENST00000425436 FAM46DQ8NEK8 389 aa15.24■□□□□ 0.03
SHOX2-202ENST00000425436 MAGEC3Q8TD91 643 aa15.24■□□□□ 0.03
SHOX2-202ENST00000425436 RHBDD1Q8TEB9 315 aa15.24■□□□□ 0.03
SHOX2-202ENST00000425436 MCUR1Q96AQ8 359 aa15.24■□□□□ 0.03
SHOX2-202ENST00000425436 PTERQ96BW5 349 aa15.24■□□□□ 0.03
SHOX2-202ENST00000425436 PHF21BQ96EK2 531 aa15.24■□□□□ 0.03
SHOX2-202ENST00000425436 SPATS2LQ9NUQ6 558 aaKnown RBP15.24■□□□□ 0.03
SHOX2-202ENST00000425436 FAM8A1Q9UBU6 413 aa15.24■□□□□ 0.03
SHOX2-202ENST00000425436 GPR34Q9UPC5 381 aa15.24■□□□□ 0.03
SHOX2-202ENST00000425436 STK38LQ9Y2H1 464 aa15.24■□□□□ 0.03
SHOX2-202ENST00000425436 PCDHGB2Q9Y5G2 931 aa15.24■□□□□ 0.03
SHOX2-202ENST00000425436 B2RBV5 119 aa15.23■□□□□ 0.03
SHOX2-202ENST00000425436 LMO7DNF2Z398 122 aa15.23■□□□□ 0.03
SHOX2-202ENST00000425436 GSC2O15499 205 aa15.23■□□□□ 0.03
SHOX2-202ENST00000425436 SUPT7LO94864 414 aa15.23■□□□□ 0.03
SHOX2-202ENST00000425436 ENO1P06733 434 aaKnown RBP15.23■□□□□ 0.03
SHOX2-202ENST00000425436 FGF4P08620 206 aa15.23■□□□□ 0.03
SHOX2-202ENST00000425436 GFAPP14136 432 aa15.23■□□□□ 0.03
SHOX2-202ENST00000425436 ACTR1BP42025 376 aa15.23■□□□□ 0.03
SHOX2-202ENST00000425436 LIMK1P53667 647 aa15.23■□□□□ 0.03
SHOX2-202ENST00000425436 ACTR1AP61163 376 aa15.23■□□□□ 0.03
SHOX2-202ENST00000425436 ARHGAP8P85298 464 aa15.23■□□□□ 0.03
SHOX2-202ENST00000425436 WASHC2DQ5SRD0 308 aa15.23■□□□□ 0.03
SHOX2-202ENST00000425436 CUZD1Q86UP6 607 aa15.23■□□□□ 0.03
SHOX2-202ENST00000425436 GKN2Q86XP6 184 aa15.23■□□□□ 0.03
SHOX2-202ENST00000425436 NAXDQ8IW45 347 aa15.23■□□□□ 0.03
SHOX2-202ENST00000425436 FBXO39Q8N4B4 442 aa15.23■□□□□ 0.03
SHOX2-202ENST00000425436 CEP70Q8NHQ1 597 aa15.23■□□□□ 0.03
SHOX2-202ENST00000425436 NETO1Q8TDF5 533 aa15.23■□□□□ 0.03
SHOX2-202ENST00000425436 C1QTNF3Q9BXJ4 246 aa15.23■□□□□ 0.03
SHOX2-202ENST00000425436 GSDMCQ9BYG8 508 aa15.23■□□□□ 0.03
SHOX2-202ENST00000425436 UNKQ9C0B0 810 aaKnown RBP15.23■□□□□ 0.03
SHOX2-202ENST00000425436 TAS2R1Q9NYW7 299 aa15.23■□□□□ 0.03
SHOX2-202ENST00000425436 TAAR2Q9P1P5 351 aa15.23■□□□□ 0.03
SHOX2-202ENST00000425436 CSNK1G3Q9Y6M4 447 aa15.23■□□□□ 0.03
SHOX2-202ENST00000425436 PIEZO1Q92508 2521 aa15.23■□□□□ 0.03
SHOX2-202ENST00000425436 TRBV23OR9-2A0A075B6M9 112 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 IQCF5A8MTL0 148 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 SIGLEC6O43699 453 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 KLK8O60259 260 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 SNX2O60749 519 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 THRAP10827 490 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 ITGB6P18564 788 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 KCNC1P48547 511 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 CLCN7P51798 805 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 IRX1P78414 480 aaPredicted RBP15.22■□□□□ 0.03
SHOX2-202ENST00000425436 OR4D1Q15615 310 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 RSPO4Q2I0M5 234 aaPredicted RBP15.22■□□□□ 0.03
SHOX2-202ENST00000425436 SLC9B1Q4ZJI4 515 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 ANKS6Q68DC2 871 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 PACS2Q86VP3 889 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 AMZ2Q86W34 360 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 TREML1Q86YW5 311 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 CLYBLQ8N0X4 340 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 PTGR2Q8N8N7 351 aaPredicted RBP15.22■□□□□ 0.03
SHOX2-202ENST00000425436 CD200R1Q8TD46 325 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 ACTRT2Q8TDY3 377 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 MAELQ96JY0 434 aaKnown RBP15.22■□□□□ 0.03
SHOX2-202ENST00000425436 DPEP2Q9H4A9 486 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 OSGEPL1Q9H4B0 414 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 GSTO2Q9H4Y5 243 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 PFDN4Q9NQP4 134 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 LATS2Q9NRM7 1088 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 TRAF6Q9Y4K3 522 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 SPEGQ15772 3267 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 FLRT2O43155 660 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 ATP6V1G2O95670 118 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 MLYCDO95822 493 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 EML2O95834 649 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 MTHFD2P13995 350 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 GRK6P43250 576 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 PRLHRP49683 370 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 INHBCP55103 352 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 LRP8Q14114 963 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 NFE2L1Q14494 772 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 PFKFB4Q16877 469 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 TTLL9Q3SXZ7 439 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 BCL7AQ4VC05 210 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 UNC50Q53HI1 259 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 VWA5B1Q5TIE3 1220 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 FAM83HQ6ZRV2 1179 aaPredicted RBP15.22■□□□□ 0.03
SHOX2-202ENST00000425436 EFL1Q7Z2Z2 1120 aaKnown RBP15.22■□□□□ 0.03
SHOX2-202ENST00000425436 ADAMTSL2Q86TH1 951 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 GPSM1Q86YR5 675 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 CFAP206Q8IYR0 622 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 SIDT2Q8NBJ9 832 aaKnown RBP15.22■□□□□ 0.03
SHOX2-202ENST00000425436 OR4C6Q8NH72 309 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 LINGO1Q96FE5 620 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 PRR11Q96HE9 360 aaPredicted RBP15.22■□□□□ 0.03
SHOX2-202ENST00000425436 ZNF514Q96K75 400 aaPredicted RBP15.22■□□□□ 0.03
SHOX2-202ENST00000425436 PANX3Q96QZ0 392 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 CCM2Q9BSQ5 444 aa15.22■□□□□ 0.03
SHOX2-202ENST00000425436 NUF2Q9BZD4 464 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 46 ms