RNA–Protein interactions for RNA: ENST00000424337.6

GTF2IRD1-202, Transcript of GTF2I repeat domain containing 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene GTF2IRD1, Length 3,077 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2IRD1-202ENST00000424337 ZNF549Q6P9A3 640 aa13.7□□□□□ -0.22
GTF2IRD1-202ENST00000424337 SYCE2Q6PIF2 218 aa13.7□□□□□ -0.22
GTF2IRD1-202ENST00000424337 NETO1Q8TDF5 533 aa13.7□□□□□ -0.22
GTF2IRD1-202ENST00000424337 UBASH3BQ8TF42 649 aa13.7□□□□□ -0.22
GTF2IRD1-202ENST00000424337 DNASE1L2Q92874 299 aa13.7□□□□□ -0.22
GTF2IRD1-202ENST00000424337 ATOH8Q96SQ7 321 aa13.7□□□□□ -0.22
GTF2IRD1-202ENST00000424337 OSMRQ99650 979 aa13.7□□□□□ -0.22
GTF2IRD1-202ENST00000424337 GDF15Q99988 308 aa13.7□□□□□ -0.22
GTF2IRD1-202ENST00000424337 COLEC11Q9BWP8 271 aa13.7□□□□□ -0.22
GTF2IRD1-202ENST00000424337 ULBP1Q9BZM6 244 aa13.7□□□□□ -0.22
GTF2IRD1-202ENST00000424337 TEKT2Q9UIF3 430 aa13.7□□□□□ -0.22
GTF2IRD1-202ENST00000424337 HMX3A6NHT5 357 aa13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 ARHGAP33O14559 1287 aa13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 POLR1CO15160 346 aaPredicted RBP13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 PCDHGA12O60330 932 aa13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 SCO1O75880 301 aa13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 SERPINF2P08697 491 aa13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 SMIM10L2AP0DMW4 78 aa13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 SMIM10L2BP0DMW5 78 aa13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 IL7P13232 177 aa13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 SNRPD2P62316 118 aaKnown RBP13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 ZMAT1Q5H9K5 638 aa13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 CPZQ66K79 652 aa13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 VN1R5Q7Z5H4 357 aa13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 CCDC71Q8IV32 467 aaPredicted RBP13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 CYP4Z2PQ8N1L4 340 aa13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 CRYBG2Q8N1P7 616 aa13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 AADATQ8N5Z0 425 aa13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 NXF2Q9GZY0 626 aaKnown RBP13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 ACTL8Q9H568 366 aa13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 ATP13A2Q9NQ11 1180 aa13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 ARIH1Q9Y4X5 557 aaPredicted RBP13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 COL1A2P08123 1366 aa13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 WBP4O75554 376 aaKnown RBP13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 CREG1O75629 220 aa13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 OR4F21O95013 312 aa13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 SNX4O95219 450 aa13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 WISP3O95389 354 aaPredicted RBP13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 UQCRC1P31930 480 aa13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 HCAR3P49019 387 aa13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 CRISP3P54108 245 aa13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 ITKQ08881 620 aa13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 GTDC1Q4AE62 458 aa13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 XKR7Q5GH72 579 aa13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 Q6ZSR9 355 aa13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 UBE2J2Q8N2K1 259 aa13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 KBTBD8Q8NFY9 601 aa13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 SLC9A7Q96T83 725 aa13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 SLC30A2Q9BRI3 323 aa13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 FAM124BQ9H5Z6 455 aaPredicted RBP13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 MUTYHQ9UIF7 546 aa13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 NOD1Q9Y239 953 aa13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 FAM50BQ9Y247 325 aa13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 GRIP1Q9Y3R0 1128 aa13.69□□□□□ -0.22
GTF2IRD1-202ENST00000424337 B8ZZF3 427 aa13.68□□□□□ -0.22
GTF2IRD1-202ENST00000424337 PKLRP30613 574 aa13.68□□□□□ -0.22
GTF2IRD1-202ENST00000424337 CPT1AP50416 773 aa13.68□□□□□ -0.22
GTF2IRD1-202ENST00000424337 TSNQ15631 228 aaKnown RBP13.68□□□□□ -0.22
GTF2IRD1-202ENST00000424337 GPAT3Q53EU6 434 aa13.68□□□□□ -0.22
GTF2IRD1-202ENST00000424337 PXDC1Q5TGL8 231 aa13.68□□□□□ -0.22
GTF2IRD1-202ENST00000424337 CCSAPQ6IQ19 270 aaPredicted RBP13.68□□□□□ -0.22
GTF2IRD1-202ENST00000424337 P3H2Q8IVL5 708 aa13.68□□□□□ -0.22
GTF2IRD1-202ENST00000424337 CHPFQ8IZ52 775 aa13.68□□□□□ -0.22
GTF2IRD1-202ENST00000424337 SLC7A6Q92536 515 aa13.68□□□□□ -0.22
GTF2IRD1-202ENST00000424337 NTAN1Q96AB6 310 aa13.68□□□□□ -0.22
GTF2IRD1-202ENST00000424337 HHIPL1Q96JK4 782 aa13.68□□□□□ -0.22
GTF2IRD1-202ENST00000424337 CCDC115Q96NT0 180 aa13.68□□□□□ -0.22
GTF2IRD1-202ENST00000424337 DCAF13Q9NV06 445 aaKnown RBP13.68□□□□□ -0.22
GTF2IRD1-202ENST00000424337 FBXO9Q9UK97 447 aaPredicted RBP13.68□□□□□ -0.22
GTF2IRD1-202ENST00000424337 NEUROG3Q9Y4Z2 214 aa13.68□□□□□ -0.22
GTF2IRD1-202ENST00000424337 A3GALT2U3KPV4 340 aa13.68□□□□□ -0.22
GTF2IRD1-202ENST00000424337 NUP214P35658 2090 aaPredicted RBP13.68□□□□□ -0.22
GTF2IRD1-202ENST00000424337 ANKRD28O15084 1053 aa13.68□□□□□ -0.22
GTF2IRD1-202ENST00000424337 ZNF682O95780 498 aa13.68□□□□□ -0.22
GTF2IRD1-202ENST00000424337 USP17L7P0C7H9 530 aa13.68□□□□□ -0.22
GTF2IRD1-202ENST00000424337 UROSP10746 265 aa13.68□□□□□ -0.22
GTF2IRD1-202ENST00000424337 MSH3P20585 1137 aa13.68□□□□□ -0.22
GTF2IRD1-202ENST00000424337 HNF4AP41235 474 aa13.68□□□□□ -0.22
GTF2IRD1-202ENST00000424337 UGT2B15P54855 530 aa13.68□□□□□ -0.22
GTF2IRD1-202ENST00000424337 MAXP61244 160 aa13.68□□□□□ -0.22
GTF2IRD1-202ENST00000424337 TIAL1Q01085 375 aaKnown RBP eCLIP13.68□□□□□ -0.224e-6■■■□□ 15.5
GTF2IRD1-202ENST00000424337 ZDHHC21Q8IVQ6 265 aa13.68□□□□□ -0.22
GTF2IRD1-202ENST00000424337 ATG16L2Q8NAA4 619 aa13.68□□□□□ -0.22
GTF2IRD1-202ENST00000424337 TMCO6Q96DC7 493 aa13.68□□□□□ -0.22
GTF2IRD1-202ENST00000424337 CCDC120Q96HB5 630 aa13.68□□□□□ -0.22
GTF2IRD1-202ENST00000424337 TBATAQ96M53 351 aa13.68□□□□□ -0.22
GTF2IRD1-202ENST00000424337 SLC2A13Q96QE2 648 aa13.68□□□□□ -0.22
GTF2IRD1-202ENST00000424337 MED10Q9BTT4 135 aa13.68□□□□□ -0.22
GTF2IRD1-202ENST00000424337 DUSP16Q9BY84 665 aa13.68□□□□□ -0.22
GTF2IRD1-202ENST00000424337 SRRDQ9UH36 339 aa13.68□□□□□ -0.22
GTF2IRD1-202ENST00000424337 IKZF3Q9UKT9 509 aa13.68□□□□□ -0.22
GTF2IRD1-202ENST00000424337 POLR3HQ9Y535 204 aaPredicted RBP13.68□□□□□ -0.22
GTF2IRD1-202ENST00000424337 FKBP9O95302 570 aa13.67□□□□□ -0.22
GTF2IRD1-202ENST00000424337 C22orf31O95567 290 aa13.67□□□□□ -0.22
GTF2IRD1-202ENST00000424337 ITGA2P17301 1181 aa13.67□□□□□ -0.22
GTF2IRD1-202ENST00000424337 TNFSF8P32971 234 aa13.67□□□□□ -0.22
GTF2IRD1-202ENST00000424337 ARHGDIAP52565 204 aa13.67□□□□□ -0.22
GTF2IRD1-202ENST00000424337 KEAP1Q14145 624 aa13.67□□□□□ -0.22
GTF2IRD1-202ENST00000424337 Q6ZPB1 254 aaPredicted RBP13.67□□□□□ -0.22
GTF2IRD1-202ENST00000424337 CCDC190Q86UF4 302 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms