RNA–Protein interactions for RNA: ENST00000423941.5

HDAC6-205, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 583 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-205ENST00000423941 PKP4Q99569 1192 aa17.85■□□□□ 0.45
HDAC6-205ENST00000423941 SPRY4Q9C004 299 aa17.85■□□□□ 0.45
HDAC6-205ENST00000423941 CHRNA10Q9GZZ6 450 aa17.85■□□□□ 0.45
HDAC6-205ENST00000423941 SYTL2Q9HCH5 934 aa17.85■□□□□ 0.45
HDAC6-205ENST00000423941 ANKRD12Q6UB98 2062 aa17.84■□□□□ 0.45
HDAC6-205ENST00000423941 A0A1W2PPV9 198 aa17.84■□□□□ 0.45
HDAC6-205ENST00000423941 C9orf172C9J069 976 aa17.84■□□□□ 0.45
HDAC6-205ENST00000423941 RASSF9O75901 435 aa17.84■□□□□ 0.45
HDAC6-205ENST00000423941 ACSL3O95573 720 aa17.84■□□□□ 0.45
HDAC6-205ENST00000423941 ZBTB11O95625 1053 aaPredicted RBP17.84■□□□□ 0.45
HDAC6-205ENST00000423941 UGT2B7P16662 529 aa17.84■□□□□ 0.45
HDAC6-205ENST00000423941 RBMS1P29558 406 aaKnown RBP17.84■□□□□ 0.45
HDAC6-205ENST00000423941 HSD17B2P37059 387 aa17.84■□□□□ 0.45
HDAC6-205ENST00000423941 SLC5A12Q1EHB4 618 aa17.84■□□□□ 0.45
HDAC6-205ENST00000423941 ANKS6Q68DC2 871 aa17.84■□□□□ 0.45
HDAC6-205ENST00000423941 SPESP1Q6UW49 350 aa17.84■□□□□ 0.45
HDAC6-205ENST00000423941 PROSER1Q86XN7 944 aa17.84■□□□□ 0.45
HDAC6-205ENST00000423941 LRRC56Q8IYG6 542 aaPredicted RBP17.84■□□□□ 0.45
HDAC6-205ENST00000423941 NKAPQ8N5F7 415 aaKnown RBP17.84■□□□□ 0.45
HDAC6-205ENST00000423941 SNIP1Q8TAD8 396 aaKnown RBP17.84■□□□□ 0.45
HDAC6-205ENST00000423941 ANKRD49Q8WVL7 239 aa17.84■□□□□ 0.45
HDAC6-205ENST00000423941 SLC44A1Q8WWI5 657 aa17.84■□□□□ 0.45
HDAC6-205ENST00000423941 SLC22A18Q96BI1 424 aa17.84■□□□□ 0.45
HDAC6-205ENST00000423941 UBXN10Q96LJ8 280 aa17.84■□□□□ 0.45
HDAC6-205ENST00000423941 CNTNAP3BQ96NU0 1288 aa17.84■□□□□ 0.45
HDAC6-205ENST00000423941 TRAPPC9Q96Q05 1148 aa17.84■□□□□ 0.45
HDAC6-205ENST00000423941 DDA1Q9BW61 102 aa17.84■□□□□ 0.45
HDAC6-205ENST00000423941 CNTNAP3Q9BZ76 1288 aa17.84■□□□□ 0.45
HDAC6-205ENST00000423941 EPB41L4BQ9H329 900 aa17.84■□□□□ 0.45
HDAC6-205ENST00000423941 PARVBQ9HBI1 364 aa17.84■□□□□ 0.45
HDAC6-205ENST00000423941 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.84■□□□□ 0.45
HDAC6-205ENST00000423941 PISDQ9UG56 409 aa17.84■□□□□ 0.45
HDAC6-205ENST00000423941 CIDEBQ9UHD4 219 aa17.84■□□□□ 0.45
HDAC6-205ENST00000423941 TSR3Q9UJK0 312 aaKnown RBP17.84■□□□□ 0.45
HDAC6-205ENST00000423941 ADAMTS6Q9UKP5 1117 aa17.84■□□□□ 0.45
HDAC6-205ENST00000423941 SLC39A10Q9ULF5 831 aa17.84■□□□□ 0.45
HDAC6-205ENST00000423941 PDE10AQ9Y233 779 aa17.84■□□□□ 0.45
HDAC6-205ENST00000423941 GSAPA4D1B5 854 aa17.83■□□□□ 0.44
HDAC6-205ENST00000423941 EFCAB7A8K855 629 aa17.83■□□□□ 0.44
HDAC6-205ENST00000423941 RIPK2O43353 540 aa17.83■□□□□ 0.44
HDAC6-205ENST00000423941 TLX3O43711 291 aaPredicted RBP17.83■□□□□ 0.44
HDAC6-205ENST00000423941 FKBP9O95302 570 aa17.83■□□□□ 0.44
HDAC6-205ENST00000423941 SLC16A8O95907 504 aa17.83■□□□□ 0.44
HDAC6-205ENST00000423941 SEPHS1P49903 392 aa17.83■□□□□ 0.44
HDAC6-205ENST00000423941 PMS2P54278 862 aa17.83■□□□□ 0.44
HDAC6-205ENST00000423941 HSD11B2P80365 405 aa17.83■□□□□ 0.44
HDAC6-205ENST00000423941 ZNF460Q14592 562 aa17.83■□□□□ 0.44
HDAC6-205ENST00000423941 USP10Q14694 798 aaKnown RBP17.83■□□□□ 0.44
HDAC6-205ENST00000423941 UBE2R2Q712K3 238 aaPredicted RBP17.83■□□□□ 0.44
HDAC6-205ENST00000423941 MYO1HQ8N1T3 1032 aa17.83■□□□□ 0.44
HDAC6-205ENST00000423941 LMNTD1Q8N9Z9 388 aa17.83■□□□□ 0.44
HDAC6-205ENST00000423941 OR2A1Q8NGT9 310 aa17.83■□□□□ 0.44
HDAC6-205ENST00000423941 ZNF480Q8WV37 535 aa17.83■□□□□ 0.44
HDAC6-205ENST00000423941 FGF11Q92914 225 aa17.83■□□□□ 0.44
HDAC6-205ENST00000423941 TSPAN17Q96FV3 270 aa17.83■□□□□ 0.44
HDAC6-205ENST00000423941 ZMYND15Q9H091 742 aa17.83■□□□□ 0.44
HDAC6-205ENST00000423941 CAB39LQ9H9S4 337 aa17.83■□□□□ 0.44
HDAC6-205ENST00000423941 THSD1Q9NS62 852 aa17.83■□□□□ 0.44
HDAC6-205ENST00000423941 LNPEPQ9UIQ6 1025 aa17.83■□□□□ 0.44
HDAC6-205ENST00000423941 IKZF3Q9UKT9 509 aa17.83■□□□□ 0.44
HDAC6-205ENST00000423941 NOVA2Q9UNW9 492 aaKnown RBP17.83■□□□□ 0.44
HDAC6-205ENST00000423941 KLK4Q9Y5K2 254 aa17.83■□□□□ 0.44
HDAC6-205ENST00000423941 ACACBO00763 2458 aa17.83■□□□□ 0.44
HDAC6-205ENST00000423941 A0A087WUV0 522 aaPredicted RBP17.82■□□□□ 0.44
HDAC6-205ENST00000423941 SLC9B1P1A6NJY1 282 aa17.82■□□□□ 0.44
HDAC6-205ENST00000423941 FOLR1P15328 257 aa17.82■□□□□ 0.44
HDAC6-205ENST00000423941 ST6GAL1P15907 406 aa17.82■□□□□ 0.44
HDAC6-205ENST00000423941 STMN1P16949 149 aa17.82■□□□□ 0.44
HDAC6-205ENST00000423941 CDH3P22223 829 aa17.82■□□□□ 0.44
HDAC6-205ENST00000423941 SLC5A2P31639 672 aa17.82■□□□□ 0.44
HDAC6-205ENST00000423941 RAB15P59190 212 aa17.82■□□□□ 0.44
HDAC6-205ENST00000423941 SH3BP2P78314 561 aa17.82■□□□□ 0.44
HDAC6-205ENST00000423941 FASTKQ14296 549 aaKnown RBP17.82■□□□□ 0.44
HDAC6-205ENST00000423941 IL11RAQ14626 422 aa17.82■□□□□ 0.44
HDAC6-205ENST00000423941 PHKG1Q16816 387 aa17.82■□□□□ 0.44
HDAC6-205ENST00000423941 PPP1R3AQ16821 1122 aa17.82■□□□□ 0.44
HDAC6-205ENST00000423941 WDR93Q6P2C0 686 aa17.82■□□□□ 0.44
HDAC6-205ENST00000423941 FBXO38Q6PIJ6 1188 aa17.82■□□□□ 0.44
HDAC6-205ENST00000423941 FOXR1Q6PIV2 292 aa17.82■□□□□ 0.44
HDAC6-205ENST00000423941 SBSNQ6UWP8 590 aa17.82■□□□□ 0.44
HDAC6-205ENST00000423941 RAB42Q8N4Z0 105 aa17.82■□□□□ 0.44
HDAC6-205ENST00000423941 MCOLN3Q8TDD5 553 aa17.82■□□□□ 0.44
HDAC6-205ENST00000423941 USP7Q93009 1102 aa17.82■□□□□ 0.44
HDAC6-205ENST00000423941 DHRS4Q9BTZ2 278 aa17.82■□□□□ 0.44
HDAC6-205ENST00000423941 DERL2Q9GZP9 239 aa17.82■□□□□ 0.44
HDAC6-205ENST00000423941 GPAMQ9HCL2 828 aa17.82■□□□□ 0.44
HDAC6-205ENST00000423941 SLC39A1Q9NY26 324 aa17.82■□□□□ 0.44
HDAC6-205ENST00000423941 ZNF180Q9UJW8 692 aa17.82■□□□□ 0.44
HDAC6-205ENST00000423941 SSUH2Q9Y2M2 353 aa17.82■□□□□ 0.44
HDAC6-205ENST00000423941 IQCJ-SCHIP1C9J366 451 aaPredicted RBP17.81■□□□□ 0.44
HDAC6-205ENST00000423941 E7ENX8 843 aa17.81■□□□□ 0.44
HDAC6-205ENST00000423941 FGF5P12034 268 aa17.81■□□□□ 0.44
HDAC6-205ENST00000423941 SAT1P21673 171 aa17.81■□□□□ 0.44
HDAC6-205ENST00000423941 MAP4P27816 1152 aaKnown RBP17.81■□□□□ 0.44
HDAC6-205ENST00000423941 IMPA1P29218 277 aa17.81■□□□□ 0.44
HDAC6-205ENST00000423941 OAS2P29728 719 aaKnown RBP17.81■□□□□ 0.44
HDAC6-205ENST00000423941 GABRA4P48169 554 aa17.81■□□□□ 0.44
HDAC6-205ENST00000423941 PNLIPRP1P54315 467 aa17.81■□□□□ 0.44
HDAC6-205ENST00000423941 RAB10P61026 200 aa17.81■□□□□ 0.44
HDAC6-205ENST00000423941 TAP2Q03519 686 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms