RNA–Protein interactions for RNA: ENST00000423902.6

CHD7-201, Transcript of chromodomain helicase DNA binding protein 7, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CHD7, Length 11,568 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7-201ENST00000423902 A0A0G2JNG1 304 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 KIR2DS3K7RE56 304 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 POLR2CP19387 275 aaPredicted RBP8.2□□□□□ -1.1
CHD7-201ENST00000423902 USP46P62068 366 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.2□□□□□ -1.1
CHD7-201ENST00000423902 LCP2Q13094 533 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 GRM7Q14831 915 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 KIR2DS5Q14953 304 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 TRIM61Q5EBN2 209 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 FAM13CQ8NE31 585 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 H3BUI4 141 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 CNOT3O75175 753 aaKnown RBP8.2□□□□□ -1.1
CHD7-201ENST00000423902 PEX11AO75192 247 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 SNX4O95219 450 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 CDK4P11802 303 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 H2AFXP16104 143 aaPredicted RBP8.2□□□□□ -1.1
CHD7-201ENST00000423902 FOLR3P41439 243 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 UGT2B15P54855 530 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 BTN3A2P78410 334 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 LYARQ9NX58 379 aaKnown RBP8.2□□□□□ -1.1
CHD7-201ENST00000423902 AP1M2Q9Y6Q5 423 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 ERI3O43414 337 aaKnown RBP8.2□□□□□ -1.1
CHD7-201ENST00000423902 ERCC1P07992 297 aaPredicted RBP8.2□□□□□ -1.1
CHD7-201ENST00000423902 GRK6P43250 576 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 NCBP2P52298 156 aaKnown RBP eCLIP8.2□□□□□ -1.16e-6■■□□□ 11.7
CHD7-201ENST00000423902 PM20D1Q6GTS8 502 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 IRF2BP1Q8IU81 584 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 SPATA6LQ8N4H0 392 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 ZNF354BQ96LW1 612 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 TSGA13Q96PP4 275 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 TFB2MQ9H5Q4 396 aaKnown RBP8.2□□□□□ -1.1
CHD7-201ENST00000423902 PRODH2Q9UF12 536 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 PROS1P07225 676 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 FASP25445 335 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 YPEL5P62699 121 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 SEMA5AQ13591 1074 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 HKDC1Q2TB90 917 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 KDM7AQ6ZMT4 941 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 GCNT7Q6ZNI0 430 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 C14orf80Q86SX3 495 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 UTP15Q8TED0 518 aaKnown RBP8.2□□□□□ -1.1
CHD7-201ENST00000423902 SLC5A11Q8WWX8 675 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 FAM117AQ9C073 453 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 ESPL1Q14674 2120 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 SDC3O75056 442 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 SLBPQ14493 270 aaKnown RBP eCLIP8.2□□□□□ -1.1
CHD7-201ENST00000423902 ZNF473Q8WTR7 871 aaKnown RBP8.2□□□□□ -1.1
CHD7-201ENST00000423902 CRYGNQ8WXF5 182 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 Q96MT0 163 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 PRDM8Q9NQV8 689 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 ACSS2Q9NR19 701 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 WASHC1A8K0Z3 465 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 WASH3PC4AMC7 463 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 PDHA1P08559 390 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 CLDN10P78369 228 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 WASH2PQ6VEQ5 465 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 FAM92BQ6ZTR7 304 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 CRISPLD2Q9H0B8 497 aa8.2□□□□□ -1.1
CHD7-201ENST00000423902 MRASO14807 208 aa8.19□□□□□ -1.1
CHD7-201ENST00000423902 SEC24AO95486 1093 aa8.19□□□□□ -1.1
CHD7-201ENST00000423902 CD70P32970 193 aa8.19□□□□□ -1.1
CHD7-201ENST00000423902 S100A5P33763 92 aa8.19□□□□□ -1.1
CHD7-201ENST00000423902 FAM189BP81408 668 aa8.19□□□□□ -1.1
CHD7-201ENST00000423902 KIAA0319Q5VV43 1072 aa8.19□□□□□ -1.1
CHD7-201ENST00000423902 CUZD1Q86UP6 607 aa8.19□□□□□ -1.1
CHD7-201ENST00000423902 RASGEF1CQ8N431 466 aa8.19□□□□□ -1.1
CHD7-201ENST00000423902 CPT1BQ92523 772 aa8.19□□□□□ -1.1
CHD7-201ENST00000423902 ALG3Q92685 438 aa8.19□□□□□ -1.1
CHD7-201ENST00000423902 PMEPA1Q969W9 287 aa8.19□□□□□ -1.1
CHD7-201ENST00000423902 DCBLD2Q96PD2 775 aa8.19□□□□□ -1.1
CHD7-201ENST00000423902 ACTL8Q9H568 366 aa8.19□□□□□ -1.1
CHD7-201ENST00000423902 POLR3HQ9Y535 204 aaPredicted RBP8.19□□□□□ -1.1
CHD7-201ENST00000423902 CRHR1P34998 444 aa8.19□□□□□ -1.1
CHD7-201ENST00000423902 SLC1A2P43004 574 aa8.19□□□□□ -1.1
CHD7-201ENST00000423902 JAZF1Q86VZ6 243 aa8.19□□□□□ -1.1
CHD7-201ENST00000423902 FBXO30Q8TB52 745 aa8.19□□□□□ -1.1
CHD7-201ENST00000423902 MFSD3Q96ES6 412 aa8.19□□□□□ -1.1
CHD7-201ENST00000423902 HCRTO43612 131 aa8.19□□□□□ -1.1
CHD7-201ENST00000423902 LYPLA1O75608 230 aaPredicted RBP8.19□□□□□ -1.1
CHD7-201ENST00000423902 UGT2B17O75795 530 aa8.19□□□□□ -1.1
CHD7-201ENST00000423902 CNTN5O94779 1100 aa8.19□□□□□ -1.1
CHD7-201ENST00000423902 DHFR2Q86XF0 187 aa8.19□□□□□ -1.1
CHD7-201ENST00000423902 PIK3C3Q8NEB9 887 aa8.19□□□□□ -1.1
CHD7-201ENST00000423902 SLC13A3Q8WWT9 602 aa8.19□□□□□ -1.1
CHD7-201ENST00000423902 APOLD1Q96LR9 279 aa8.19□□□□□ -1.1
CHD7-201ENST00000423902 CFAP20Q9Y6A4 193 aaKnown RBP8.19□□□□□ -1.1
CHD7-201ENST00000423902 SLC16A5O15375 505 aa8.19□□□□□ -1.1
CHD7-201ENST00000423902 TOP3BO95985 862 aaKnown RBP8.19□□□□□ -1.1
CHD7-201ENST00000423902 PRPS2P11908 318 aa8.19□□□□□ -1.1
CHD7-201ENST00000423902 ITGA3P26006 1051 aa8.19□□□□□ -1.1
CHD7-201ENST00000423902 GCNT6Q5T4J0 391 aa8.19□□□□□ -1.1
CHD7-201ENST00000423902 Q6ZVL8 140 aa8.19□□□□□ -1.1
CHD7-201ENST00000423902 DENND6AQ8IWF6 608 aa8.19□□□□□ -1.1
CHD7-201ENST00000423902 TAC3Q9UHF0 121 aa8.19□□□□□ -1.1
CHD7-201ENST00000423902 ZNF180Q9UJW8 692 aa8.19□□□□□ -1.1
CHD7-201ENST00000423902 ZBTB42B2RXF5 422 aa8.19□□□□□ -1.1
CHD7-201ENST00000423902 SOX30O94993 753 aa8.19□□□□□ -1.1
CHD7-201ENST00000423902 PBX2P40425 430 aa8.19□□□□□ -1.1
CHD7-201ENST00000423902 AMIGO1Q86WK6 493 aa8.19□□□□□ -1.1
CHD7-201ENST00000423902 IGSF8Q969P0 613 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms