RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 EBF2Q9HAK2 575 aa16.33■□□□□ 0.2
SSBP3-205ENST00000417664 LRTM1Q9HBL6 345 aa16.33■□□□□ 0.2
SSBP3-205ENST00000417664 CD248Q9HCU0 757 aa16.33■□□□□ 0.2
SSBP3-205ENST00000417664 SLC52A3Q9NQ40 469 aa16.33■□□□□ 0.2
SSBP3-205ENST00000417664 INTS7Q9NVH2 962 aaKnown RBP16.33■□□□□ 0.2
SSBP3-205ENST00000417664 C1orf109Q9NX04 203 aa16.33■□□□□ 0.2
SSBP3-205ENST00000417664 ANGPTL2Q9UKU9 493 aa16.33■□□□□ 0.2
SSBP3-205ENST00000417664 NCKAP1Q9Y2A7 1128 aa16.33■□□□□ 0.2
SSBP3-205ENST00000417664 TMED5Q9Y3A6 229 aa16.33■□□□□ 0.2
SSBP3-205ENST00000417664 F5P12259 2224 aa16.33■□□□□ 0.2
SSBP3-205ENST00000417664 H0Y3Z8 333 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 CLGNO14967 610 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 KCNJ13O60928 360 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 KRT36O76013 467 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 RPN2P04844 631 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 SLC2A4P14672 509 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 GNAZP19086 355 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 CAPN3P20807 821 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 JAK1P23458 1154 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 ITPKAP23677 461 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 HALP42357 657 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 CASP2P42575 452 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 BDKRB1P46663 353 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 THOP1P52888 689 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 PNLIPRP1P54315 467 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 ADPRHP54922 357 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 IRF8Q02556 426 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 SLC34A1Q06495 639 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 CHIT1Q13231 466 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 E2F2Q14209 437 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 INPP5AQ14642 412 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 IRF4Q15306 451 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 VPS26BQ4G0F5 336 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 RFTN2Q52LD8 501 aaPredicted RBP16.32■□□□□ 0.2
SSBP3-205ENST00000417664 EOGTQ5NDL2 527 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 SAMD4BQ5PRF9 694 aaKnown RBP16.32■□□□□ 0.2
SSBP3-205ENST00000417664 C10orf62Q5T681 223 aaPredicted RBP16.32■□□□□ 0.2
SSBP3-205ENST00000417664 CACHD1Q5VU97 1274 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 IL23RQ5VWK5 629 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 FRG2Q64ET8 278 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 CYP20A1Q6UW02 462 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 XKR5Q6UX68 686 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 PRR23BQ6ZRT6 265 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 PDZD3Q86UT5 571 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 HORMAD1Q86X24 394 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 RGL4Q8IZJ4 473 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 GLB1L3Q8NCI6 653 aaPredicted RBP16.32■□□□□ 0.2
SSBP3-205ENST00000417664 OR9A1PQ8NGU1 263 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 PROKR1Q8TCW9 393 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 SIPA1Q96FS4 1042 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 METTL2AQ96IZ6 378 aaKnown RBP16.32■□□□□ 0.2
SSBP3-205ENST00000417664 FRG2BQ96QU4 278 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 C1orf50Q9BV19 199 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 SLC17A9Q9BYT1 436 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 LEF1Q9UJU2 399 aaPredicted RBP16.32■□□□□ 0.2
SSBP3-205ENST00000417664 TMEM98Q9Y2Y6 226 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 KCNE2Q9Y6J6 123 aa16.32■□□□□ 0.2
SSBP3-205ENST00000417664 CCDC154A6NI56 674 aa16.31■□□□□ 0.2
SSBP3-205ENST00000417664 H3BQ06 376 aaPredicted RBP16.31■□□□□ 0.2
SSBP3-205ENST00000417664 EEDO75530 441 aaKnown RBP16.31■□□□□ 0.2
SSBP3-205ENST00000417664 PAK4O96013 591 aaPredicted RBP16.31■□□□□ 0.2
SSBP3-205ENST00000417664 MYCLP1P12525 358 aaPredicted RBP16.31■□□□□ 0.2
SSBP3-205ENST00000417664 DPP6P42658 865 aa16.31■□□□□ 0.2
SSBP3-205ENST00000417664 NME5P56597 212 aa16.31■□□□□ 0.2
SSBP3-205ENST00000417664 UFM1P61960 85 aa16.31■□□□□ 0.2
SSBP3-205ENST00000417664 DMPKQ09013 629 aa16.31■□□□□ 0.2
SSBP3-205ENST00000417664 CEACAM7Q14002 265 aa16.31■□□□□ 0.2
SSBP3-205ENST00000417664 NFE2L1Q14494 772 aa16.31■□□□□ 0.2
SSBP3-205ENST00000417664 CAPN13Q6MZZ7 669 aaPredicted RBP16.31■□□□□ 0.2
SSBP3-205ENST00000417664 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP16.31■□□□□ 0.22e-6■■■■■ 40.9
SSBP3-205ENST00000417664 GPATCH1Q9BRR8 931 aaKnown RBP16.31■□□□□ 0.2
SSBP3-205ENST00000417664 MBNL1Q9NR56 388 aaKnown RBP16.31■□□□□ 0.2
SSBP3-205ENST00000417664 ADA2Q9NZK5 511 aa16.31■□□□□ 0.2
SSBP3-205ENST00000417664 TMEM181Q9P2C4 612 aa16.31■□□□□ 0.2
SSBP3-205ENST00000417664 MAP10Q9P2G4 905 aa16.31■□□□□ 0.2
SSBP3-205ENST00000417664 SUCOQ9UBS9 1254 aaKnown RBP16.31■□□□□ 0.2
SSBP3-205ENST00000417664 ZNHIT2Q9UHR6 403 aa16.31■□□□□ 0.2
SSBP3-205ENST00000417664 ACSL5Q9ULC5 683 aa16.31■□□□□ 0.2
SSBP3-205ENST00000417664 A0A1W2PQU0 124 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 H0YIV9 168 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 RNGTTO60942 597 aaKnown RBP16.3■□□□□ 0.2
SSBP3-205ENST00000417664 ANP32DO95626 131 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 PDYNP01213 254 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 G6PDP11413 515 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 HSD3B1P14060 373 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 HSD3B2P26439 372 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 MAPK1P28482 360 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 ZFP36L2P47974 494 aaKnown RBP16.3■□□□□ 0.2
SSBP3-205ENST00000417664 RPL38P63173 70 aaKnown RBP16.3■□□□□ 0.2
SSBP3-205ENST00000417664 CSTF3Q12996 717 aaKnown RBP16.3■□□□□ 0.2
SSBP3-205ENST00000417664 FGL2Q14314 439 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 METRNLQ641Q3 311 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 GRHL2Q6ISB3 625 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 RETREG3Q86VR2 466 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 RAD51AP1Q96B01 352 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 ASB9Q96DX5 294 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 CMTM7Q96FZ5 175 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 HBEGFQ99075 208 aa16.3■□□□□ 0.2
SSBP3-205ENST00000417664 GAS2L1Q99501 681 aaPredicted RBP16.3■□□□□ 0.2
SSBP3-205ENST00000417664 ZBTB18Q99592 522 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms